RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
LIN54-207ENST00000508171 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
LIN54-207ENST00000508171 PRG4Q92954 1404 aaPredicted RBP15.37■□□□□ 0.05
LIN54-207ENST00000508171 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
LIN54-207ENST00000508171 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
LIN54-207ENST00000508171 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
LIN54-207ENST00000508171 ROCK1Q13464 1354 aa15.35■□□□□ 0.05
LIN54-207ENST00000508171 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
LIN54-207ENST00000508171 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
LIN54-207ENST00000508171 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
LIN54-207ENST00000508171 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
LIN54-207ENST00000508171 CFDP1Q9UEE9 299 aaPredicted RBP15.32■□□□□ 0.04
LIN54-207ENST00000508171 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
LIN54-207ENST00000508171 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
LIN54-207ENST00000508171 ZNF777Q9ULD5 760 aaPredicted RBP15.31■□□□□ 0.04
LIN54-207ENST00000508171 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
LIN54-207ENST00000508171 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIN54-207ENST00000508171 BCANQ96GW7 911 aa15.3■□□□□ 0.04
LIN54-207ENST00000508171 FKBP8Q14318 412 aa15.3■□□□□ 0.04
LIN54-207ENST00000508171 NBPF8Q3BBV2 869 aa15.3■□□□□ 0.04
LIN54-207ENST00000508171 KIF14Q15058 1648 aa15.29■□□□□ 0.04
LIN54-207ENST00000508171 C11orf95C9JLR9 678 aaPredicted RBP15.29■□□□□ 0.04
LIN54-207ENST00000508171 GPATCH8Q9UKJ3 1502 aaKnown RBP15.28■□□□□ 0.04
LIN54-207ENST00000508171 CAMSAP2Q08AD1 1489 aa15.28■□□□□ 0.04
LIN54-207ENST00000508171 RPRD2Q5VT52 1461 aaKnown RBP15.28■□□□□ 0.04
LIN54-207ENST00000508171 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
LIN54-207ENST00000508171 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
LIN54-207ENST00000508171 NUP160Q12769 1436 aa15.25■□□□□ 0.03
LIN54-207ENST00000508171 TEX14Q8IWB6 1497 aa15.24■□□□□ 0.03
LIN54-207ENST00000508171 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
LIN54-207ENST00000508171 PZPP20742 1482 aa15.23■□□□□ 0.03
LIN54-207ENST00000508171 ADCY10Q96PN6 1610 aa15.22■□□□□ 0.03
LIN54-207ENST00000508171 PLEKHD1A6NEE1 506 aa15.21■□□□□ 0.03
LIN54-207ENST00000508171 TSHZ2Q9NRE2 1034 aa15.21■□□□□ 0.03
LIN54-207ENST00000508171 CCDC184Q52MB2 194 aa15.2■□□□□ 0.02
LIN54-207ENST00000508171 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
LIN54-207ENST00000508171 HNRNPUQ00839 825 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIN54-207ENST00000508171 CCDC7Q96M83 1385 aa15.2■□□□□ 0.02
LIN54-207ENST00000508171 ATP10BO94823 1461 aa15.19■□□□□ 0.02
LIN54-207ENST00000508171 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
LIN54-207ENST00000508171 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
LIN54-207ENST00000508171 PKD2Q13563 968 aa15.18■□□□□ 0.02
LIN54-207ENST00000508171 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
LIN54-207ENST00000508171 ABCA8O94911 1581 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 NEFLP07196 543 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 ADGRL2O95490 1459 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 ANKRD30AQ9BXX3 1397 aa15.17■□□□□ 0.02
LIN54-207ENST00000508171 KIF7Q2M1P5 1343 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 ANKRD50Q9ULJ7 1429 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
LIN54-207ENST00000508171 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
LIN54-207ENST00000508171 ABCC10Q5T3U5 1492 aa15.15■□□□□ 0.02
LIN54-207ENST00000508171 HNRNPMP52272 730 aaKnown RBP eCLIP15.13■□□□□ 0.01
LIN54-207ENST00000508171 NUP155O75694 1391 aa15.11■□□□□ 0.01
LIN54-207ENST00000508171 C9orf84Q5VXU9 1444 aa15.11■□□□□ 0.01
LIN54-207ENST00000508171 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 POLR1AO95602 1720 aaPredicted RBP15.1■□□□□ 0.01
LIN54-207ENST00000508171 MBD5Q9P267 1494 aa15.1■□□□□ 0.01
LIN54-207ENST00000508171 PTPRGP23470 1445 aa15.09■□□□□ 0.01
LIN54-207ENST00000508171 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
LIN54-207ENST00000508171 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
LIN54-207ENST00000508171 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
LIN54-207ENST00000508171 CNGB1Q14028 1251 aaPredicted RBP15.07■□□□□ 0
LIN54-207ENST00000508171 BCORL1Q5H9F3 1711 aa15.06■□□□□ 0
LIN54-207ENST00000508171 USP47Q96K76 1375 aa15.06■□□□□ 0
LIN54-207ENST00000508171 SHANK2Q9UPX8 1470 aa15.05■□□□□ 0
LIN54-207ENST00000508171 KIF15Q9NS87 1388 aa15.04■□□□□ -0
LIN54-207ENST00000508171 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
LIN54-207ENST00000508171 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
LIN54-207ENST00000508171 SAMD9LQ8IVG5 1584 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 CHD1O14646 1710 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 KDM5CP41229 1560 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 ARHGEF5Q12774 1597 aa15.01□□□□□ -0.01
LIN54-207ENST00000508171 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
LIN54-207ENST00000508171 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
LIN54-207ENST00000508171 CARD11Q9BXL7 1154 aa15□□□□□ -0.01
LIN54-207ENST00000508171 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
LIN54-207ENST00000508171 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
LIN54-207ENST00000508171 PREX2Q70Z35 1606 aa14.98□□□□□ -0.01
LIN54-207ENST00000508171 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
LIN54-207ENST00000508171 ZBED9Q6R2W3 1325 aa14.97□□□□□ -0.01
LIN54-207ENST00000508171 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
LIN54-207ENST00000508171 ST20-MTHFSA0A0A6YYL1 179 aa14.96□□□□□ -0.01
LIN54-207ENST00000508171 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 TTC37Q6PGP7 1564 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 FAM135AQ9P2D6 1515 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 RSPH4AQ5TD94 716 aa14.95□□□□□ -0.02
LIN54-207ENST00000508171 SYCP2Q9BX26 1530 aa14.94□□□□□ -0.02
LIN54-207ENST00000508171 ARHGEF12Q9NZN5 1544 aa14.94□□□□□ -0.02
LIN54-207ENST00000508171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
LIN54-207ENST00000508171 RBM19Q9Y4C8 960 aaKnown RBP14.94□□□□□ -0.02
LIN54-207ENST00000508171 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
LIN54-207ENST00000508171 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
LIN54-207ENST00000508171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.93□□□□□ -0.02
LIN54-207ENST00000508171 RGL3Q3MIN7 710 aa14.93□□□□□ -0.02
LIN54-207ENST00000508171 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms