RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 EMILIN3Q9NT22 766 aa6.68□□□□□ -1.34
CCDC30-212ENST00000507855 SEMA3EO15041 775 aa6.67□□□□□ -1.34
CCDC30-212ENST00000507855 PLCG2P16885 1265 aa6.67□□□□□ -1.34
CCDC30-212ENST00000507855 SEC24BO95487 1268 aa6.67□□□□□ -1.34
CCDC30-212ENST00000507855 TPRNQ4KMQ1 711 aa6.67□□□□□ -1.34
CCDC30-212ENST00000507855 MFSD10Q14728 455 aa6.66□□□□□ -1.34
CCDC30-212ENST00000507855 IER5LQ5T953 404 aa6.66□□□□□ -1.34
CCDC30-212ENST00000507855 GPHNQ9NQX3 736 aaPredicted RBP6.66□□□□□ -1.34
CCDC30-212ENST00000507855 E2F4Q16254 413 aa6.66□□□□□ -1.34
CCDC30-212ENST00000507855 DDX27Q96GQ7 796 aaKnown RBP6.66□□□□□ -1.34
CCDC30-212ENST00000507855 WDR70Q9NW82 654 aa6.66□□□□□ -1.34
CCDC30-212ENST00000507855 KIF3CO14782 793 aa6.65□□□□□ -1.34
CCDC30-212ENST00000507855 CLCN6P51797 869 aa6.65□□□□□ -1.35
CCDC30-212ENST00000507855 PDE4AP27815 886 aa6.64□□□□□ -1.35
CCDC30-212ENST00000507855 PPP1R15BQ5SWA1 713 aa6.64□□□□□ -1.35
CCDC30-212ENST00000507855 NBR1Q14596 966 aa6.63□□□□□ -1.35
CCDC30-212ENST00000507855 SLC39A7Q92504 469 aa6.62□□□□□ -1.35
CCDC30-212ENST00000507855 C7P10643 843 aa6.62□□□□□ -1.35
CCDC30-212ENST00000507855 DPYSL4O14531 572 aa6.61□□□□□ -1.35
CCDC30-212ENST00000507855 MLLT3P42568 568 aaPredicted RBP6.61□□□□□ -1.35
CCDC30-212ENST00000507855 CAMK2BQ13554 666 aa6.61□□□□□ -1.35
CCDC30-212ENST00000507855 PLPP6Q8IY26 295 aa6.61□□□□□ -1.35
CCDC30-212ENST00000507855 UPF1Q92900 1129 aaKnown RBP eCLIP6.6□□□□□ -1.35
CCDC30-212ENST00000507855 FOXK1P85037 733 aa6.59□□□□□ -1.35
CCDC30-212ENST00000507855 TMC2Q8TDI7 906 aa6.58□□□□□ -1.36
CCDC30-212ENST00000507855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCDC30-212ENST00000507855 ARHGEF1Q92888 912 aaKnown RBP6.57□□□□□ -1.36
CCDC30-212ENST00000507855 P3H3Q8IVL6 736 aa6.56□□□□□ -1.36
CCDC30-212ENST00000507855 TESPA1A2RU30 521 aaPredicted RBP6.55□□□□□ -1.36
CCDC30-212ENST00000507855 L3MBTL3Q96JM7 780 aaPredicted RBP6.55□□□□□ -1.36
CCDC30-212ENST00000507855 PRIM1P49642 420 aaKnown RBP6.54□□□□□ -1.36
CCDC30-212ENST00000507855 RBM26Q5T8P6 1007 aaKnown RBP6.54□□□□□ -1.36
CCDC30-212ENST00000507855 LMOD2Q6P5Q4 547 aa6.54□□□□□ -1.36
CCDC30-212ENST00000507855 KHSRPQ92945 711 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCDC30-212ENST00000507855 G3V3G9 751 aa6.52□□□□□ -1.37
CCDC30-212ENST00000507855 C3orf67Q6ZVT6 689 aa6.52□□□□□ -1.37
CCDC30-212ENST00000507855 OXER1Q8TDS5 423 aa6.5□□□□□ -1.37
CCDC30-212ENST00000507855 DDX12PQ92771 950 aa6.5□□□□□ -1.37
CCDC30-212ENST00000507855 ARIH1Q9Y4X5 557 aaPredicted RBP6.5□□□□□ -1.37
CCDC30-212ENST00000507855 PDIA6Q15084 440 aa6.49□□□□□ -1.37
CCDC30-212ENST00000507855 GRXCR2A6NFK2 248 aa6.48□□□□□ -1.37
CCDC30-212ENST00000507855 OTUD5Q96G74 571 aa6.48□□□□□ -1.37
CCDC30-212ENST00000507855 HOXB3P14651 431 aaPredicted RBP6.47□□□□□ -1.37
CCDC30-212ENST00000507855 ZC3H15Q8WU90 426 aaKnown RBP6.47□□□□□ -1.37
CCDC30-212ENST00000507855 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.47□□□□□ -1.37
CCDC30-212ENST00000507855 MAP3K9P80192 1104 aa6.46□□□□□ -1.38
CCDC30-212ENST00000507855 SLAIN1Q8ND83 568 aa6.46□□□□□ -1.38
CCDC30-212ENST00000507855 EVI5O60447 810 aa6.44□□□□□ -1.38
CCDC30-212ENST00000507855 PTCD2Q8WV60 388 aaKnown RBP6.44□□□□□ -1.38
CCDC30-212ENST00000507855 KDM4FA0A1W2PPD8 638 aa6.44□□□□□ -1.38
CCDC30-212ENST00000507855 OSBPP22059 807 aa6.44□□□□□ -1.38
CCDC30-212ENST00000507855 FECHP22830 423 aa6.44□□□□□ -1.38
CCDC30-212ENST00000507855 ARSIQ5FYB1 569 aa6.44□□□□□ -1.38
CCDC30-212ENST00000507855 GPR37O15354 613 aa6.42□□□□□ -1.38
CCDC30-212ENST00000507855 NUDT7P0C024 238 aa6.42□□□□□ -1.38
CCDC30-212ENST00000507855 PCDHGA4Q9Y5G9 962 aa6.42□□□□□ -1.38
CCDC30-212ENST00000507855 SLC24A3Q9HC58 644 aa6.42□□□□□ -1.38
CCDC30-212ENST00000507855 CDHR5Q9HBB8 845 aa6.41□□□□□ -1.38
CCDC30-212ENST00000507855 TSR1Q2NL82 804 aaKnown RBP6.4□□□□□ -1.39
CCDC30-212ENST00000507855 GPR153Q6NV75 609 aa6.4□□□□□ -1.39
CCDC30-212ENST00000507855 SLC34A2O95436 690 aa6.39□□□□□ -1.39
CCDC30-212ENST00000507855 PCDHGA10Q9Y5H3 936 aa6.39□□□□□ -1.39
CCDC30-212ENST00000507855 RBM33Q96EV2 1170 aaKnown RBP6.39□□□□□ -1.39
CCDC30-212ENST00000507855 ZMYND10O75800 440 aa6.38□□□□□ -1.39
CCDC30-212ENST00000507855 ANO8Q9HCE9 1232 aaPredicted RBP6.38□□□□□ -1.39
CCDC30-212ENST00000507855 SPDYE16A6NNV3 312 aaPredicted RBP6.37□□□□□ -1.39
CCDC30-212ENST00000507855 FAM161AQ3B820 660 aa6.37□□□□□ -1.39
CCDC30-212ENST00000507855 LHX8Q68G74 356 aa6.37□□□□□ -1.39
CCDC30-212ENST00000507855 NUTM2FA1L443 756 aa6.36□□□□□ -1.39
CCDC30-212ENST00000507855 NPDC1Q9NQX5 325 aaPredicted RBP6.36□□□□□ -1.39
CCDC30-212ENST00000507855 GPIHBP1Q8IV16 184 aa6.36□□□□□ -1.39
CCDC30-212ENST00000507855 PTGER2P43116 358 aa6.35□□□□□ -1.39
CCDC30-212ENST00000507855 SCUBE2Q9NQ36 999 aa6.35□□□□□ -1.39
CCDC30-212ENST00000507855 TBC1D12O60347 775 aa6.35□□□□□ -1.39
CCDC30-212ENST00000507855 LHX6Q9UPM6 363 aa6.35□□□□□ -1.39
CCDC30-212ENST00000507855 NLRP7Q8WX94 980 aa6.34□□□□□ -1.39
CCDC30-212ENST00000507855 GPBP1L1Q9HC44 474 aaPredicted RBP6.34□□□□□ -1.4
CCDC30-212ENST00000507855 ADAM33Q9BZ11 813 aa6.33□□□□□ -1.4
CCDC30-212ENST00000507855 C3orf80F5H4A9 247 aa6.33□□□□□ -1.4
CCDC30-212ENST00000507855 BRPF1P55201 1214 aaPredicted RBP6.33□□□□□ -1.4
CCDC30-212ENST00000507855 BARGINQ6ZT62 677 aa6.33□□□□□ -1.4
CCDC30-212ENST00000507855 MARVELD3Q96A59 401 aa6.33□□□□□ -1.4
CCDC30-212ENST00000507855 FOSBP53539 338 aa6.31□□□□□ -1.4
CCDC30-212ENST00000507855 PTGDRQ13258 359 aa6.31□□□□□ -1.4
CCDC30-212ENST00000507855 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
CCDC30-212ENST00000507855 ZNF454Q8N9F8 522 aa6.31□□□□□ -1.4
CCDC30-212ENST00000507855 MAP3K7O43318 606 aa6.31□□□□□ -1.4
CCDC30-212ENST00000507855 SMYD5Q6GMV2 418 aa6.31□□□□□ -1.4
CCDC30-212ENST00000507855 PHOX2BQ99453 314 aa6.31□□□□□ -1.4
CCDC30-212ENST00000507855 POTEB3A0JP26 581 aa6.3□□□□□ -1.4
CCDC30-212ENST00000507855 EN1Q05925 392 aaPredicted RBP6.3□□□□□ -1.4
CCDC30-212ENST00000507855 POTEBQ6S5H4 581 aa6.3□□□□□ -1.4
CCDC30-212ENST00000507855 POTEEQ6S8J3 1075 aa6.3□□□□□ -1.4
CCDC30-212ENST00000507855 COL9A1P20849 921 aa6.29□□□□□ -1.4
CCDC30-212ENST00000507855 ZNF710Q8N1W2 664 aa6.29□□□□□ -1.4
CCDC30-212ENST00000507855 TULP1O00294 542 aaPredicted RBP6.29□□□□□ -1.4
CCDC30-212ENST00000507855 DOK7Q18PE1 504 aa6.29□□□□□ -1.4
CCDC30-212ENST00000507855 FAM198AQ9UFP1 575 aa6.29□□□□□ -1.4
CCDC30-212ENST00000507855 ST18O60284 1047 aa6.28□□□□□ -1.4
CCDC30-212ENST00000507855 PHF14O94880 888 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms