RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
AC008539.1-201ENST00000507653 ADGRD1Q6QNK2 874 aa10.41□□□□□ -0.74
AC008539.1-201ENST00000507653 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
AC008539.1-201ENST00000507653 HRO43593 1189 aa10.34□□□□□ -0.75
AC008539.1-201ENST00000507653 IFFO2Q5TF58 517 aa10.34□□□□□ -0.75
AC008539.1-201ENST00000507653 NUDT7P0C024 238 aa10.33□□□□□ -0.76
AC008539.1-201ENST00000507653 LHX6Q9UPM6 363 aa10.33□□□□□ -0.76
AC008539.1-201ENST00000507653 KCTD12Q96CX2 325 aaKnown RBP10.32□□□□□ -0.76
AC008539.1-201ENST00000507653 A0A0G2JS52 829 aa10.31□□□□□ -0.76
AC008539.1-201ENST00000507653 ARHGAP33O14559 1287 aa10.27□□□□□ -0.77
AC008539.1-201ENST00000507653 Q6ZNB5 142 aa10.27□□□□□ -0.77
AC008539.1-201ENST00000507653 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
AC008539.1-201ENST00000507653 TK2O00142 265 aa10.26□□□□□ -0.77
AC008539.1-201ENST00000507653 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
AC008539.1-201ENST00000507653 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
AC008539.1-201ENST00000507653 LCE2BO14633 110 aa10.19□□□□□ -0.78
AC008539.1-201ENST00000507653 PTPN5P54829 565 aa10.19□□□□□ -0.78
AC008539.1-201ENST00000507653 PSEN2P49810 448 aa10.18□□□□□ -0.78
AC008539.1-201ENST00000507653 PCDHGA4Q9Y5G9 962 aa10.18□□□□□ -0.78
AC008539.1-201ENST00000507653 KIF3CO14782 793 aa10.14□□□□□ -0.79
AC008539.1-201ENST00000507653 SOX12O15370 315 aa10.14□□□□□ -0.79
AC008539.1-201ENST00000507653 FKBP8Q14318 412 aa10.14□□□□□ -0.79
AC008539.1-201ENST00000507653 SLC34A2O95436 690 aa10.12□□□□□ -0.79
AC008539.1-201ENST00000507653 PHF8Q9UPP1 1060 aa10.12□□□□□ -0.79
AC008539.1-201ENST00000507653 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
AC008539.1-201ENST00000507653 C2orf72A6NCS6 295 aa10.08□□□□□ -0.8
AC008539.1-201ENST00000507653 STAC3Q96MF2 364 aa10.08□□□□□ -0.8
AC008539.1-201ENST00000507653 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
AC008539.1-201ENST00000507653 KDM4FA0A1W2PPD8 638 aa10.06□□□□□ -0.8
AC008539.1-201ENST00000507653 VASPP50552 380 aaPredicted RBP10.06□□□□□ -0.8
AC008539.1-201ENST00000507653 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
AC008539.1-201ENST00000507653 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
AC008539.1-201ENST00000507653 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
AC008539.1-201ENST00000507653 VPS9D1Q9Y2B5 631 aa10□□□□□ -0.81
AC008539.1-201ENST00000507653 LAPTM4AQ15012 233 aa9.96□□□□□ -0.82
AC008539.1-201ENST00000507653 FBXO22Q8NEZ5 403 aa9.95□□□□□ -0.82
AC008539.1-201ENST00000507653 KCNK17Q96T54 332 aa9.95□□□□□ -0.82
AC008539.1-201ENST00000507653 PPP4R3BQ5MIZ7 849 aa9.94□□□□□ -0.82
AC008539.1-201ENST00000507653 ITGBL1O95965 494 aaPredicted RBP9.93□□□□□ -0.82
AC008539.1-201ENST00000507653 BHMG1C9JSJ3 638 aaPredicted RBP9.92□□□□□ -0.82
AC008539.1-201ENST00000507653 SPOCK2Q92563 424 aa9.92□□□□□ -0.82
AC008539.1-201ENST00000507653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
AC008539.1-201ENST00000507653 NLRP6P59044 892 aa9.9□□□□□ -0.82
AC008539.1-201ENST00000507653 WNT2BQ93097 391 aa9.9□□□□□ -0.82
AC008539.1-201ENST00000507653 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
AC008539.1-201ENST00000507653 ZNF775Q96BV0 537 aaPredicted RBP9.89□□□□□ -0.83
AC008539.1-201ENST00000507653 GFRA3O60609 400 aa9.88□□□□□ -0.83
AC008539.1-201ENST00000507653 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
AC008539.1-201ENST00000507653 PTCD2Q8WV60 388 aaKnown RBP9.86□□□□□ -0.83
AC008539.1-201ENST00000507653 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
AC008539.1-201ENST00000507653 ZNF787Q6DD87 383 aa9.84□□□□□ -0.83
AC008539.1-201ENST00000507653 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
AC008539.1-201ENST00000507653 IFNLR1Q8IU57 520 aaPredicted RBP9.83□□□□□ -0.84
AC008539.1-201ENST00000507653 TRIM41Q8WV44 630 aa9.83□□□□□ -0.84
AC008539.1-201ENST00000507653 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
AC008539.1-201ENST00000507653 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
AC008539.1-201ENST00000507653 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
AC008539.1-201ENST00000507653 MRPL50Q8N5N7 158 aaKnown RBP9.8□□□□□ -0.84
AC008539.1-201ENST00000507653 MFRPQ9BY79 579 aa9.79□□□□□ -0.84
AC008539.1-201ENST00000507653 NRG2O14511 850 aaPredicted RBP9.77□□□□□ -0.85
AC008539.1-201ENST00000507653 VGFO15240 615 aaPredicted RBP9.77□□□□□ -0.85
AC008539.1-201ENST00000507653 ZBED2Q9BTP6 218 aa9.76□□□□□ -0.85
AC008539.1-201ENST00000507653 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
AC008539.1-201ENST00000507653 KCNC4Q03721 635 aa9.71□□□□□ -0.86
AC008539.1-201ENST00000507653 LOC100996750A0A140TA64 210 aa9.69□□□□□ -0.86
AC008539.1-201ENST00000507653 KRTAP4-6Q9BYQ5 205 aa9.69□□□□□ -0.86
AC008539.1-201ENST00000507653 NBPF3Q9H094 633 aa9.68□□□□□ -0.86
AC008539.1-201ENST00000507653 BCAMP50895 628 aa9.66□□□□□ -0.86
AC008539.1-201ENST00000507653 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
AC008539.1-201ENST00000507653 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
AC008539.1-201ENST00000507653 PTPREP23469 700 aa9.65□□□□□ -0.86
AC008539.1-201ENST00000507653 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
AC008539.1-201ENST00000507653 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
AC008539.1-201ENST00000507653 TBC1D12O60347 775 aa9.63□□□□□ -0.87
AC008539.1-201ENST00000507653 FOXK1P85037 733 aa9.63□□□□□ -0.87
AC008539.1-201ENST00000507653 NYAP1Q6ZVC0 841 aa9.62□□□□□ -0.87
AC008539.1-201ENST00000507653 PRKD2Q9BZL6 878 aa9.62□□□□□ -0.87
AC008539.1-201ENST00000507653 SOWAHBA6NEL2 793 aa9.6□□□□□ -0.87
AC008539.1-201ENST00000507653 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
AC008539.1-201ENST00000507653 FOSBP53539 338 aa9.59□□□□□ -0.87
AC008539.1-201ENST00000507653 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
AC008539.1-201ENST00000507653 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
AC008539.1-201ENST00000507653 PPP1R37O75864 691 aa9.55□□□□□ -0.88
AC008539.1-201ENST00000507653 DSG2Q14126 1118 aa9.55□□□□□ -0.88
AC008539.1-201ENST00000507653 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
AC008539.1-201ENST00000507653 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
AC008539.1-201ENST00000507653 RABGEF1Q9UJ41 708 aa9.53□□□□□ -0.88
AC008539.1-201ENST00000507653 PDZRN3Q9UPQ7 1066 aa9.53□□□□□ -0.88
AC008539.1-201ENST00000507653 ADAM33Q9BZ11 813 aa9.52□□□□□ -0.89
AC008539.1-201ENST00000507653 POTECB2RU33 542 aa9.51□□□□□ -0.89
AC008539.1-201ENST00000507653 TREML4Q6UXN2 200 aa9.51□□□□□ -0.89
AC008539.1-201ENST00000507653 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
AC008539.1-201ENST00000507653 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
AC008539.1-201ENST00000507653 LAPTM4BQ86VI4 370 aa9.48□□□□□ -0.89
AC008539.1-201ENST00000507653 ZFRQ96KR1 1074 aaKnown RBP9.48□□□□□ -0.89
AC008539.1-201ENST00000507653 UPF1Q92900 1129 aaKnown RBP eCLIP9.47□□□□□ -0.89
AC008539.1-201ENST00000507653 JPH4Q96JJ6 628 aa9.47□□□□□ -0.89
AC008539.1-201ENST00000507653 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
AC008539.1-201ENST00000507653 PPP1R3GB7ZBB8 358 aa9.44□□□□□ -0.9
AC008539.1-201ENST00000507653 STK25O00506 426 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms