RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
AC008539.1-201ENST00000507653 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
AC008539.1-201ENST00000507653 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
AC008539.1-201ENST00000507653 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
AC008539.1-201ENST00000507653 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
AC008539.1-201ENST00000507653 FOXD1Q16676 465 aa20.79■□□□□ 0.92
AC008539.1-201ENST00000507653 MSH5O43196 834 aa19.76■□□□□ 0.75
AC008539.1-201ENST00000507653 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
AC008539.1-201ENST00000507653 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
AC008539.1-201ENST00000507653 ADRA2BP18089 450 aa18.54■□□□□ 0.56
AC008539.1-201ENST00000507653 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
AC008539.1-201ENST00000507653 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
AC008539.1-201ENST00000507653 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
AC008539.1-201ENST00000507653 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
AC008539.1-201ENST00000507653 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
AC008539.1-201ENST00000507653 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
AC008539.1-201ENST00000507653 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
AC008539.1-201ENST00000507653 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
AC008539.1-201ENST00000507653 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
AC008539.1-201ENST00000507653 POTEHQ6S545 545 aa16.29■□□□□ 0.2
AC008539.1-201ENST00000507653 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
AC008539.1-201ENST00000507653 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
AC008539.1-201ENST00000507653 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
AC008539.1-201ENST00000507653 CNKSR2Q8WXI2 1034 aa15.82■□□□□ 0.12
AC008539.1-201ENST00000507653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
AC008539.1-201ENST00000507653 DSG3P32926 999 aa15.42■□□□□ 0.06
AC008539.1-201ENST00000507653 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
AC008539.1-201ENST00000507653 CAPN15O75808 1086 aa15.21■□□□□ 0.03
AC008539.1-201ENST00000507653 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
AC008539.1-201ENST00000507653 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
AC008539.1-201ENST00000507653 ABCB7O75027 752 aa14.81□□□□□ -0.04
AC008539.1-201ENST00000507653 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
AC008539.1-201ENST00000507653 SP7Q8TDD2 431 aaPredicted RBP14.79□□□□□ -0.04
AC008539.1-201ENST00000507653 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
AC008539.1-201ENST00000507653 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
AC008539.1-201ENST00000507653 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
AC008539.1-201ENST00000507653 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
AC008539.1-201ENST00000507653 APLP2Q06481 763 aa14.49□□□□□ -0.09
AC008539.1-201ENST00000507653 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
AC008539.1-201ENST00000507653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
AC008539.1-201ENST00000507653 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
AC008539.1-201ENST00000507653 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
AC008539.1-201ENST00000507653 HAX1O00165 279 aa14.2□□□□□ -0.14
AC008539.1-201ENST00000507653 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
AC008539.1-201ENST00000507653 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
AC008539.1-201ENST00000507653 POLA2Q14181 598 aa14.12□□□□□ -0.15
AC008539.1-201ENST00000507653 EVX2Q03828 476 aa14.06□□□□□ -0.16
AC008539.1-201ENST00000507653 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
AC008539.1-201ENST00000507653 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
AC008539.1-201ENST00000507653 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
AC008539.1-201ENST00000507653 LHX8Q68G74 356 aa13.85□□□□□ -0.19
AC008539.1-201ENST00000507653 PLSCR2Q9NRY7 297 aa13.79□□□□□ -0.2
AC008539.1-201ENST00000507653 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
AC008539.1-201ENST00000507653 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
AC008539.1-201ENST00000507653 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
AC008539.1-201ENST00000507653 KCNA4P22459 653 aa13.64□□□□□ -0.23
AC008539.1-201ENST00000507653 GABBR2O75899 941 aa13.63□□□□□ -0.23
AC008539.1-201ENST00000507653 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
AC008539.1-201ENST00000507653 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
AC008539.1-201ENST00000507653 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
AC008539.1-201ENST00000507653 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
AC008539.1-201ENST00000507653 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
AC008539.1-201ENST00000507653 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
AC008539.1-201ENST00000507653 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
AC008539.1-201ENST00000507653 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
AC008539.1-201ENST00000507653 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
AC008539.1-201ENST00000507653 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
AC008539.1-201ENST00000507653 POTEMA6NI47 508 aa13.11□□□□□ -0.31
AC008539.1-201ENST00000507653 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
AC008539.1-201ENST00000507653 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
AC008539.1-201ENST00000507653 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
AC008539.1-201ENST00000507653 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
AC008539.1-201ENST00000507653 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
AC008539.1-201ENST00000507653 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
AC008539.1-201ENST00000507653 CLCN6P51797 869 aa12.96□□□□□ -0.33
AC008539.1-201ENST00000507653 POTEB2H3BUK9 544 aa12.93□□□□□ -0.34
AC008539.1-201ENST00000507653 FBLN2P98095 1184 aa12.92□□□□□ -0.34
AC008539.1-201ENST00000507653 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
AC008539.1-201ENST00000507653 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
AC008539.1-201ENST00000507653 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
AC008539.1-201ENST00000507653 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
AC008539.1-201ENST00000507653 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
AC008539.1-201ENST00000507653 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
AC008539.1-201ENST00000507653 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
AC008539.1-201ENST00000507653 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
AC008539.1-201ENST00000507653 PABPN1Q86U42 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
AC008539.1-201ENST00000507653 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
AC008539.1-201ENST00000507653 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
AC008539.1-201ENST00000507653 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
AC008539.1-201ENST00000507653 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
AC008539.1-201ENST00000507653 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
AC008539.1-201ENST00000507653 ZBTB22O15209 634 aa12.56□□□□□ -0.4
AC008539.1-201ENST00000507653 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
AC008539.1-201ENST00000507653 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
AC008539.1-201ENST00000507653 METRNQ9UJH8 293 aa12.45□□□□□ -0.42
AC008539.1-201ENST00000507653 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
AC008539.1-201ENST00000507653 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
AC008539.1-201ENST00000507653 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
AC008539.1-201ENST00000507653 C7P10643 843 aa12.36□□□□□ -0.43
AC008539.1-201ENST00000507653 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms