RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 TROQ12816 1431 aaPredicted RBP21■□□□□ 0.95
SNHG4-204ENST00000507197 MADDQ8WXG6 1647 aa21■□□□□ 0.95
SNHG4-204ENST00000507197 KIF14Q15058 1648 aa20.99■□□□□ 0.95
SNHG4-204ENST00000507197 YEATS2Q9ULM3 1422 aa20.97■□□□□ 0.95
SNHG4-204ENST00000507197 MYO5CQ9NQX4 1742 aa20.96■□□□□ 0.95
SNHG4-204ENST00000507197 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
SNHG4-204ENST00000507197 CASKIN1Q8WXD9 1431 aa20.93■□□□□ 0.94
SNHG4-204ENST00000507197 ZNF518AQ6AHZ1 1483 aa20.93■□□□□ 0.94
SNHG4-204ENST00000507197 ARHGAP5Q13017 1502 aa20.93■□□□□ 0.94
SNHG4-204ENST00000507197 ATP10AO60312 1499 aa20.91■□□□□ 0.94
SNHG4-204ENST00000507197 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
SNHG4-204ENST00000507197 RIMS1Q86UR5 1692 aaKnown RBP20.91■□□□□ 0.94
SNHG4-204ENST00000507197 C9orf84Q5VXU9 1444 aa20.9■□□□□ 0.94
SNHG4-204ENST00000507197 MLECQ14165 292 aa20.88■□□□□ 0.93
SNHG4-204ENST00000507197 LMTK3Q96Q04 1460 aa20.88■□□□□ 0.93
SNHG4-204ENST00000507197 MYT1LQ9UL68 1186 aa20.86■□□□□ 0.93
SNHG4-204ENST00000507197 FYCO1Q9BQS8 1478 aa20.84■□□□□ 0.93
SNHG4-204ENST00000507197 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
SNHG4-204ENST00000507197 AFAP1Q8N556 730 aa20.84■□□□□ 0.93
SNHG4-204ENST00000507197 KDM5CP41229 1560 aa20.83■□□□□ 0.92
SNHG4-204ENST00000507197 LRRIQ1Q96JM4 1722 aa20.83■□□□□ 0.92
SNHG4-204ENST00000507197 SIGLEC1Q9BZZ2 1709 aa20.82■□□□□ 0.92
SNHG4-204ENST00000507197 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
SNHG4-204ENST00000507197 FER1L4A9Z1Z3 1794 aa20.8■□□□□ 0.92
SNHG4-204ENST00000507197 MLH3Q9UHC1 1453 aa20.79■□□□□ 0.92
SNHG4-204ENST00000507197 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
SNHG4-204ENST00000507197 FBXO41Q8TF61 875 aa20.78■□□□□ 0.92
SNHG4-204ENST00000507197 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
SNHG4-204ENST00000507197 HSPA2P54652 639 aa20.76■□□□□ 0.91
SNHG4-204ENST00000507197 ABCC1P33527 1531 aa20.76■□□□□ 0.91
SNHG4-204ENST00000507197 REREQ9P2R6 1566 aa20.76■□□□□ 0.91
SNHG4-204ENST00000507197 DIP2CQ9Y2E4 1556 aa20.74■□□□□ 0.91
SNHG4-204ENST00000507197 TRAPPC8Q9Y2L5 1435 aa20.73■□□□□ 0.91
SNHG4-204ENST00000507197 ESF1Q9H501 851 aaKnown RBP20.73■□□□□ 0.91
SNHG4-204ENST00000507197 ZNF777Q9ULD5 760 aaPredicted RBP20.71■□□□□ 0.91
SNHG4-204ENST00000507197 AGLP35573 1532 aa20.7■□□□□ 0.9
SNHG4-204ENST00000507197 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
SNHG4-204ENST00000507197 ABCA6Q8N139 1617 aa20.68■□□□□ 0.9
SNHG4-204ENST00000507197 CDC42BPAQ5VT25 1732 aa20.68■□□□□ 0.9
SNHG4-204ENST00000507197 CEBPAP49715 358 aaPredicted RBP20.68■□□□□ 0.9
SNHG4-204ENST00000507197 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
SNHG4-204ENST00000507197 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
SNHG4-204ENST00000507197 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
SNHG4-204ENST00000507197 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
SNHG4-204ENST00000507197 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
SNHG4-204ENST00000507197 PREX1Q8TCU6 1659 aa20.66■□□□□ 0.9
SNHG4-204ENST00000507197 UHRF1BP1Q6BDS2 1440 aa20.65■□□□□ 0.9
SNHG4-204ENST00000507197 KIAA1107Q9UPP5 1409 aa20.65■□□□□ 0.9
SNHG4-204ENST00000507197 SPAG9O60271 1321 aaKnown RBP20.65■□□□□ 0.9
SNHG4-204ENST00000507197 CNTLNQ9NXG0 1405 aa20.63■□□□□ 0.89
SNHG4-204ENST00000507197 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
SNHG4-204ENST00000507197 SAMD9LQ8IVG5 1584 aa20.63■□□□□ 0.89
SNHG4-204ENST00000507197 SYCP2Q9BX26 1530 aa20.63■□□□□ 0.89
SNHG4-204ENST00000507197 KIDINS220Q9ULH0 1771 aa20.62■□□□□ 0.89
SNHG4-204ENST00000507197 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNHG4-204ENST00000507197 SETD1BQ9UPS6 1966 aaKnown RBP20.57■□□□□ 0.88
SNHG4-204ENST00000507197 CEP162Q5TB80 1403 aa20.56■□□□□ 0.88
SNHG4-204ENST00000507197 CERKQ8TCT0 537 aa20.56■□□□□ 0.88
SNHG4-204ENST00000507197 ATP7AQ04656 1500 aa20.56■□□□□ 0.88
SNHG4-204ENST00000507197 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
SNHG4-204ENST00000507197 C3P01024 1663 aa20.54■□□□□ 0.88
SNHG4-204ENST00000507197 A2MP01023 1474 aa20.52■□□□□ 0.88
SNHG4-204ENST00000507197 NPATQ14207 1427 aa20.52■□□□□ 0.87
SNHG4-204ENST00000507197 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
SNHG4-204ENST00000507197 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
SNHG4-204ENST00000507197 TIAM1Q13009 1591 aa20.5■□□□□ 0.87
SNHG4-204ENST00000507197 ZMYM3Q14202 1370 aa20.49■□□□□ 0.87
SNHG4-204ENST00000507197 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
SNHG4-204ENST00000507197 PLXNC1O60486 1568 aa20.48■□□□□ 0.87
SNHG4-204ENST00000507197 RTEL1-TNFRSF6BF6WH68 1400 aa20.47■□□□□ 0.87
SNHG4-204ENST00000507197 PTPRTO14522 1441 aa20.47■□□□□ 0.87
SNHG4-204ENST00000507197 ZNF644Q9H582 1327 aaPredicted RBP20.47■□□□□ 0.87
SNHG4-204ENST00000507197 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
SNHG4-204ENST00000507197 MBD5Q9P267 1494 aa20.46■□□□□ 0.87
SNHG4-204ENST00000507197 RSPH4AQ5TD94 716 aa20.46■□□□□ 0.87
SNHG4-204ENST00000507197 GGT6Q6P531 493 aa20.46■□□□□ 0.87
SNHG4-204ENST00000507197 STRCQ7RTU9 1775 aa20.45■□□□□ 0.86
SNHG4-204ENST00000507197 ADGBQ8N7X0 1667 aa20.43■□□□□ 0.86
SNHG4-204ENST00000507197 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
SNHG4-204ENST00000507197 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
SNHG4-204ENST00000507197 NCOA1Q15788 1441 aa20.41■□□□□ 0.86
SNHG4-204ENST00000507197 CCDC141Q6ZP82 1450 aa20.4■□□□□ 0.86
SNHG4-204ENST00000507197 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
SNHG4-204ENST00000507197 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
SNHG4-204ENST00000507197 VPS8Q8N3P4 1428 aa20.37■□□□□ 0.85
SNHG4-204ENST00000507197 PTPRKQ15262 1439 aa20.36■□□□□ 0.85
SNHG4-204ENST00000507197 CAMSAP1Q5T5Y3 1602 aa20.36■□□□□ 0.85
SNHG4-204ENST00000507197 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
SNHG4-204ENST00000507197 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
SNHG4-204ENST00000507197 PKD2Q13563 968 aa20.35■□□□□ 0.85
SNHG4-204ENST00000507197 KIF3BO15066 747 aa20.34■□□□□ 0.85
SNHG4-204ENST00000507197 PLA2R1Q13018 1463 aa20.33■□□□□ 0.85
SNHG4-204ENST00000507197 FAM135AQ9P2D6 1515 aa20.32■□□□□ 0.84
SNHG4-204ENST00000507197 LRRC9Q6ZRR7 1453 aa20.32■□□□□ 0.84
SNHG4-204ENST00000507197 MYO3AQ8NEV4 1616 aa20.31■□□□□ 0.84
SNHG4-204ENST00000507197 CEP170BQ9Y4F5 1589 aaPredicted RBP20.31■□□□□ 0.84
SNHG4-204ENST00000507197 ZNF142P52746 1687 aaPredicted RBP20.31■□□□□ 0.84
SNHG4-204ENST00000507197 ARHGEF5Q12774 1597 aa20.3■□□□□ 0.84
SNHG4-204ENST00000507197 LOC105371045A0A1W2PR82 267 aa20.3■□□□□ 0.84
SNHG4-204ENST00000507197 IQSEC2Q5JU85 1478 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms