RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 SETD5Q9C0A6 1442 aa36.64■■■■□ 3.46
DHFR-203ENST00000505337 MIA2Q96PC5 1412 aa36.59■■■■□ 3.45
DHFR-203ENST00000505337 TROQ12816 1431 aaPredicted RBP36.55■■■■□ 3.44
DHFR-203ENST00000505337 CD109Q6YHK3 1445 aa36.55■■■■□ 3.44
DHFR-203ENST00000505337 ITSN2Q9NZM3 1697 aa36.54■■■■□ 3.44
DHFR-203ENST00000505337 KDM6BO15054 1643 aa36.53■■■■□ 3.44
DHFR-203ENST00000505337 PTPRKQ15262 1439 aa36.52■■■■□ 3.44
DHFR-203ENST00000505337 KIF14Q15058 1648 aa36.5■■■■□ 3.43
DHFR-203ENST00000505337 TEX14Q8IWB6 1497 aa36.5■■■■□ 3.43
DHFR-203ENST00000505337 PLEKHD1A6NEE1 506 aa36.5■■■■□ 3.43
DHFR-203ENST00000505337 CDK11AQ9UQ88 783 aaPredicted RBP36.48■■■■□ 3.43
DHFR-203ENST00000505337 GCC2Q8IWJ2 1684 aa36.47■■■■□ 3.43
DHFR-203ENST00000505337 ABCA9Q8IUA7 1624 aa36.47■■■■□ 3.43
DHFR-203ENST00000505337 HFM1A2PYH4 1435 aa36.46■■■■□ 3.43
DHFR-203ENST00000505337 COL17A1Q9UMD9 1497 aaPredicted RBP36.42■■■■□ 3.42
DHFR-203ENST00000505337 DNMT1P26358 1616 aaKnown RBP36.39■■■■□ 3.42
DHFR-203ENST00000505337 CDC42BPAQ5VT25 1732 aa36.36■■■■□ 3.41
DHFR-203ENST00000505337 AKNAQ7Z591 1439 aa36.35■■■■□ 3.41
DHFR-203ENST00000505337 NAIPQ13075 1403 aa36.33■■■■□ 3.41
DHFR-203ENST00000505337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.31■■■■□ 3.4
DHFR-203ENST00000505337 GPATCH8Q9UKJ3 1502 aaKnown RBP36.28■■■■□ 3.4
DHFR-203ENST00000505337 CROCC2H7BZ55 1655 aa36.26■■■■□ 3.4
DHFR-203ENST00000505337 TTC37Q6PGP7 1564 aa36.25■■■■□ 3.39
DHFR-203ENST00000505337 CAMSAP2Q08AD1 1489 aa36.23■■■■□ 3.39
DHFR-203ENST00000505337 DAPK1P53355 1430 aa36.23■■■■□ 3.39
DHFR-203ENST00000505337 ADGBQ8N7X0 1667 aa36.19■■■■□ 3.38
DHFR-203ENST00000505337 ARAP3Q8WWN8 1544 aa36.18■■■■□ 3.38
DHFR-203ENST00000505337 NEO1Q92859 1461 aa36.18■■■■□ 3.38
DHFR-203ENST00000505337 ABCC5O15440 1437 aa36.15■■■■□ 3.38
DHFR-203ENST00000505337 PREX2Q70Z35 1606 aa36.12■■■■□ 3.37
DHFR-203ENST00000505337 ROCK1Q13464 1354 aa36.12■■■■□ 3.37
DHFR-203ENST00000505337 PLCH2O75038 1416 aa36.1■■■■□ 3.37
DHFR-203ENST00000505337 CDC42BPBQ9Y5S2 1711 aa36.09■■■■□ 3.37
DHFR-203ENST00000505337 FANCAO15360 1455 aa36.09■■■■□ 3.37
DHFR-203ENST00000505337 ZNF644Q9H582 1327 aaPredicted RBP36.08■■■■□ 3.37
DHFR-203ENST00000505337 CFDP1Q9UEE9 299 aaPredicted RBP36.05■■■■□ 3.36
DHFR-203ENST00000505337 RAPGEF3O95398 923 aa36.03■■■■□ 3.36
DHFR-203ENST00000505337 CHIC2Q9UKJ5 165 aa36.01■■■■□ 3.36
DHFR-203ENST00000505337 CFAP74Q9C0B2 1584 aa36.01■■■■□ 3.35
DHFR-203ENST00000505337 MYO5CQ9NQX4 1742 aa36■■■■□ 3.35
DHFR-203ENST00000505337 ADGRL2O95490 1459 aa36■■■■□ 3.35
DHFR-203ENST00000505337 RRP7BPQ9NSQ0 103 aa36■■■■□ 3.35
DHFR-203ENST00000505337 ZNF316A6NFI3 1004 aaPredicted RBP35.99■■■■□ 3.35
DHFR-203ENST00000505337 FRMPD1Q5SYB0 1578 aa35.96■■■■□ 3.35
DHFR-203ENST00000505337 SHANK2Q9UPX8 1470 aa35.95■■■■□ 3.35
DHFR-203ENST00000505337 ARHGEF5Q12774 1597 aa35.95■■■■□ 3.35
DHFR-203ENST00000505337 SAMD9LQ8IVG5 1584 aa35.94■■■■□ 3.34
DHFR-203ENST00000505337 EFCAB2Q5VUJ9 269 aa35.92■■■■□ 3.34
DHFR-203ENST00000505337 DENND4BO75064 1496 aaPredicted RBP35.92■■■■□ 3.34
DHFR-203ENST00000505337 ADGRL1O94910 1474 aa35.88■■■■□ 3.33
DHFR-203ENST00000505337 ARHGAP5Q13017 1502 aa35.88■■■■□ 3.33
DHFR-203ENST00000505337 RICTORQ6R327 1708 aa35.88■■■■□ 3.33
DHFR-203ENST00000505337 KDM4FA0A1W2PPD8 638 aa35.86■■■■□ 3.33
DHFR-203ENST00000505337 NCOA1Q15788 1441 aa35.85■■■■□ 3.33
DHFR-203ENST00000505337 SCAPERQ9BY12 1400 aa35.85■■■■□ 3.33
DHFR-203ENST00000505337 ZNF777Q9ULD5 760 aaPredicted RBP35.83■■■■□ 3.33
DHFR-203ENST00000505337 SIN3AQ96ST3 1273 aa35.82■■■■□ 3.32
DHFR-203ENST00000505337 ACIN1Q9UKV3 1341 aaKnown RBP35.82■■■■□ 3.32
DHFR-203ENST00000505337 TIMELESSQ9UNS1 1208 aa35.8■■■■□ 3.32
DHFR-203ENST00000505337 MBD5Q9P267 1494 aa35.79■■■■□ 3.32
DHFR-203ENST00000505337 POGZQ7Z3K3 1410 aa35.78■■■■□ 3.32
DHFR-203ENST00000505337 AEBP2Q6ZN18 517 aaPredicted RBP35.78■■■■□ 3.32
DHFR-203ENST00000505337 DIEXFQ68CQ4 756 aaKnown RBP35.77■■■■□ 3.32
DHFR-203ENST00000505337 C9orf84Q5VXU9 1444 aa35.76■■■■□ 3.31
DHFR-203ENST00000505337 ZMYM4Q5VZL5 1548 aa35.74■■■■□ 3.31
DHFR-203ENST00000505337 ANKRD30AQ9BXX3 1397 aa35.74■■■■□ 3.31
DHFR-203ENST00000505337 CCDC141Q6ZP82 1450 aa35.73■■■■□ 3.31
DHFR-203ENST00000505337 SYCP2Q9BX26 1530 aa35.72■■■■□ 3.31
DHFR-203ENST00000505337 MAST1Q9Y2H9 1570 aa35.72■■■■□ 3.31
DHFR-203ENST00000505337 NEUROD1Q13562 356 aa35.69■■■■□ 3.3
DHFR-203ENST00000505337 ARHGEF12Q9NZN5 1544 aa35.68■■■■□ 3.3
DHFR-203ENST00000505337 ABCC1P33527 1531 aa35.67■■■■□ 3.3
DHFR-203ENST00000505337 ARHGEF40Q8TER5 1519 aa35.67■■■■□ 3.3
DHFR-203ENST00000505337 AFAP1Q8N556 730 aa35.66■■■■□ 3.3
DHFR-203ENST00000505337 MAGI2Q86UL8 1455 aa35.66■■■■□ 3.3
DHFR-203ENST00000505337 YEATS2Q9ULM3 1422 aa35.65■■■■□ 3.3
DHFR-203ENST00000505337 ZNF518AQ6AHZ1 1483 aa35.65■■■■□ 3.3
DHFR-203ENST00000505337 PLEKHH2Q8IVE3 1493 aa35.65■■■■□ 3.3
DHFR-203ENST00000505337 TRIM52Q96A61 297 aa35.65■■■■□ 3.3
DHFR-203ENST00000505337 PZPP20742 1482 aa35.63■■■■□ 3.29
DHFR-203ENST00000505337 ZFYVE16Q7Z3T8 1539 aa35.63■■■■□ 3.29
DHFR-203ENST00000505337 KDM5CP41229 1560 aa35.61■■■■□ 3.29
DHFR-203ENST00000505337 MPHOSPH9Q99550 1183 aa35.61■■■■□ 3.29
DHFR-203ENST00000505337 ANKRD50Q9ULJ7 1429 aa35.61■■■■□ 3.29
DHFR-203ENST00000505337 KIAA1107Q9UPP5 1409 aa35.61■■■■□ 3.29
DHFR-203ENST00000505337 TRAPPC8Q9Y2L5 1435 aa35.61■■■■□ 3.29
DHFR-203ENST00000505337 PLXNC1O60486 1568 aa35.59■■■■□ 3.29
DHFR-203ENST00000505337 TONSLQ96HA7 1378 aa35.58■■■■□ 3.29
DHFR-203ENST00000505337 KDM5DQ9BY66 1539 aa35.57■■■■□ 3.28
DHFR-203ENST00000505337 HNRNPMP52272 730 aaKnown RBP eCLIP35.56■■■■□ 3.28
DHFR-203ENST00000505337 RSPH4AQ5TD94 716 aa35.54■■■■□ 3.28
DHFR-203ENST00000505337 PPP1R15AO75807 674 aaPredicted RBP35.52■■■■□ 3.28
DHFR-203ENST00000505337 TSPY4P0CV99 314 aa35.52■■■■□ 3.28
DHFR-203ENST00000505337 TSPY10P0CW01 314 aa35.52■■■■□ 3.28
DHFR-203ENST00000505337 KIF15Q9NS87 1388 aa35.51■■■■□ 3.27
DHFR-203ENST00000505337 SIGLEC1Q9BZZ2 1709 aa35.5■■■■□ 3.27
DHFR-203ENST00000505337 MLH3Q9UHC1 1453 aa35.49■■■■□ 3.27
DHFR-203ENST00000505337 HECW2Q9P2P5 1572 aa35.49■■■■□ 3.27
DHFR-203ENST00000505337 ARID4BQ4LE39 1312 aaPredicted RBP35.48■■■■□ 3.27
DHFR-203ENST00000505337 ANKRD30BQ9BXX2 1392 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms