RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
LINC00958-201ENST00000504230 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
LINC00958-201ENST00000504230 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
LINC00958-201ENST00000504230 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
LINC00958-201ENST00000504230 TIAM1Q13009 1591 aa17.05■□□□□ 0.32
LINC00958-201ENST00000504230 PLEKHD1A6NEE1 506 aa17.04■□□□□ 0.32
LINC00958-201ENST00000504230 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
LINC00958-201ENST00000504230 MAPKBP1O60336 1514 aa17■□□□□ 0.31
LINC00958-201ENST00000504230 AKT1S1Q96B36 256 aa17■□□□□ 0.31
LINC00958-201ENST00000504230 ASXL2Q76L83 1435 aa17■□□□□ 0.31
LINC00958-201ENST00000504230 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
LINC00958-201ENST00000504230 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
LINC00958-201ENST00000504230 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
LINC00958-201ENST00000504230 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
LINC00958-201ENST00000504230 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.31
LINC00958-201ENST00000504230 KANK4Q5T7N3 995 aaPredicted RBP16.95■□□□□ 0.3
LINC00958-201ENST00000504230 MAGI3Q5TCQ9 1506 aa16.95■□□□□ 0.3
LINC00958-201ENST00000504230 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
LINC00958-201ENST00000504230 KIF14Q15058 1648 aa16.9■□□□□ 0.3
LINC00958-201ENST00000504230 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
LINC00958-201ENST00000504230 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.29
LINC00958-201ENST00000504230 CHRDL2Q6WN34 429 aa16.88■□□□□ 0.29
LINC00958-201ENST00000504230 ABCC10Q5T3U5 1492 aa16.87■□□□□ 0.29
LINC00958-201ENST00000504230 NCOA2Q15596 1464 aa16.86■□□□□ 0.29
LINC00958-201ENST00000504230 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
LINC00958-201ENST00000504230 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
LINC00958-201ENST00000504230 GLI2P10070 1586 aa16.84■□□□□ 0.29
LINC00958-201ENST00000504230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00958-201ENST00000504230 CCNB3Q8WWL7 1395 aa16.83■□□□□ 0.28
LINC00958-201ENST00000504230 ABCA9Q8IUA7 1624 aa16.82■□□□□ 0.28
LINC00958-201ENST00000504230 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
LINC00958-201ENST00000504230 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
LINC00958-201ENST00000504230 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
LINC00958-201ENST00000504230 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
LINC00958-201ENST00000504230 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
LINC00958-201ENST00000504230 SPDYE2Q495Y8 402 aa16.79■□□□□ 0.28
LINC00958-201ENST00000504230 CD109Q6YHK3 1445 aa16.79■□□□□ 0.28
LINC00958-201ENST00000504230 KIF13AQ9H1H9 1805 aa16.77■□□□□ 0.28
LINC00958-201ENST00000504230 GPATCH8Q9UKJ3 1502 aaKnown RBP16.77■□□□□ 0.28
LINC00958-201ENST00000504230 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.28
LINC00958-201ENST00000504230 PLCH2O75038 1416 aa16.77■□□□□ 0.27
LINC00958-201ENST00000504230 MYOM3Q5VTT5 1437 aa16.77■□□□□ 0.27
LINC00958-201ENST00000504230 ITSN2Q9NZM3 1697 aa16.77■□□□□ 0.27
LINC00958-201ENST00000504230 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.27
LINC00958-201ENST00000504230 MAP3K4Q9Y6R4 1608 aa16.76■□□□□ 0.27
LINC00958-201ENST00000504230 CFDP1Q9UEE9 299 aaPredicted RBP16.76■□□□□ 0.27
LINC00958-201ENST00000504230 ARAP3Q8WWN8 1544 aa16.74■□□□□ 0.27
LINC00958-201ENST00000504230 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
LINC00958-201ENST00000504230 CDC42BPAQ5VT25 1732 aa16.74■□□□□ 0.27
LINC00958-201ENST00000504230 EFCAB2Q5VUJ9 269 aa16.73■□□□□ 0.27
LINC00958-201ENST00000504230 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
LINC00958-201ENST00000504230 ARHGAP5Q13017 1502 aa16.73■□□□□ 0.27
LINC00958-201ENST00000504230 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
LINC00958-201ENST00000504230 FGD6Q6ZV73 1430 aa16.71■□□□□ 0.27
LINC00958-201ENST00000504230 CDC42BPBQ9Y5S2 1711 aa16.71■□□□□ 0.26
LINC00958-201ENST00000504230 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
LINC00958-201ENST00000504230 FANCAO15360 1455 aa16.7■□□□□ 0.26
LINC00958-201ENST00000504230 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
LINC00958-201ENST00000504230 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
LINC00958-201ENST00000504230 NEO1Q92859 1461 aa16.68■□□□□ 0.26
LINC00958-201ENST00000504230 PLEKHH2Q8IVE3 1493 aa16.65■□□□□ 0.26
LINC00958-201ENST00000504230 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
LINC00958-201ENST00000504230 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
LINC00958-201ENST00000504230 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
LINC00958-201ENST00000504230 PPRC1Q5VV67 1664 aaKnown RBP16.65■□□□□ 0.26
LINC00958-201ENST00000504230 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
LINC00958-201ENST00000504230 TCOF1Q13428 1488 aaKnown RBP16.64■□□□□ 0.25
LINC00958-201ENST00000504230 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
LINC00958-201ENST00000504230 SAMD9LQ8IVG5 1584 aa16.63■□□□□ 0.25
LINC00958-201ENST00000504230 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
LINC00958-201ENST00000504230 PITPNM1O00562 1244 aa16.62■□□□□ 0.25
LINC00958-201ENST00000504230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC00958-201ENST00000504230 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
LINC00958-201ENST00000504230 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
LINC00958-201ENST00000504230 ABCC1P33527 1531 aa16.6■□□□□ 0.25
LINC00958-201ENST00000504230 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
LINC00958-201ENST00000504230 RSPH4AQ5TD94 716 aa16.6■□□□□ 0.25
LINC00958-201ENST00000504230 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
LINC00958-201ENST00000504230 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
LINC00958-201ENST00000504230 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.25
LINC00958-201ENST00000504230 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
LINC00958-201ENST00000504230 DENND4BO75064 1496 aaPredicted RBP16.56■□□□□ 0.24
LINC00958-201ENST00000504230 MBD5Q9P267 1494 aa16.56■□□□□ 0.24
LINC00958-201ENST00000504230 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
LINC00958-201ENST00000504230 CCDC141Q6ZP82 1450 aa16.55■□□□□ 0.24
LINC00958-201ENST00000504230 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
LINC00958-201ENST00000504230 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
LINC00958-201ENST00000504230 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
LINC00958-201ENST00000504230 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
LINC00958-201ENST00000504230 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
LINC00958-201ENST00000504230 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
LINC00958-201ENST00000504230 ZNF518AQ6AHZ1 1483 aa16.53■□□□□ 0.24
LINC00958-201ENST00000504230 DNMT1P26358 1616 aaKnown RBP16.53■□□□□ 0.24
LINC00958-201ENST00000504230 ITGAEP38570 1179 aa16.52■□□□□ 0.24
LINC00958-201ENST00000504230 AFAP1Q8N556 730 aa16.52■□□□□ 0.24
LINC00958-201ENST00000504230 DAPK1P53355 1430 aa16.52■□□□□ 0.24
LINC00958-201ENST00000504230 ABCC5O15440 1437 aa16.51■□□□□ 0.23
LINC00958-201ENST00000504230 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
LINC00958-201ENST00000504230 PIP4P2Q8N4L2 257 aa16.51■□□□□ 0.23
LINC00958-201ENST00000504230 KDM6BO15054 1643 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms