RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
PCDHA1-203ENST00000504120 SRPK2P78362 688 aaKnown RBP21.2■□□□□ 0.99
PCDHA1-203ENST00000504120 OS9Q13438 667 aaPredicted RBP21.2■□□□□ 0.98
PCDHA1-203ENST00000504120 KTN1Q86UP2 1357 aaKnown RBP21.2■□□□□ 0.98
PCDHA1-203ENST00000504120 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
PCDHA1-203ENST00000504120 DNTTIP2Q5QJE6 756 aaKnown RBP21.16■□□□□ 0.98
PCDHA1-203ENST00000504120 RAB3GAP2Q9H2M9 1393 aa21.15■□□□□ 0.98
PCDHA1-203ENST00000504120 CFAP44Q96MT7 982 aa21.13■□□□□ 0.97
PCDHA1-203ENST00000504120 TPRNQ4KMQ1 711 aa21.13■□□□□ 0.97
PCDHA1-203ENST00000504120 HSCBQ8IWL3 235 aa21.13■□□□□ 0.97
PCDHA1-203ENST00000504120 MPHOSPH9Q99550 1183 aa21.13■□□□□ 0.97
PCDHA1-203ENST00000504120 KCNJ4P48050 445 aa21.12■□□□□ 0.97
PCDHA1-203ENST00000504120 FGD1P98174 961 aa21.12■□□□□ 0.97
PCDHA1-203ENST00000504120 RALBP1Q15311 655 aa21.12■□□□□ 0.97
PCDHA1-203ENST00000504120 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
PCDHA1-203ENST00000504120 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
PCDHA1-203ENST00000504120 FOXD1Q16676 465 aa21.09■□□□□ 0.97
PCDHA1-203ENST00000504120 HDGFL2Q7Z4V5 671 aaPredicted RBP21.09■□□□□ 0.97
PCDHA1-203ENST00000504120 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
PCDHA1-203ENST00000504120 NUP155O75694 1391 aa21.08■□□□□ 0.97
PCDHA1-203ENST00000504120 GGT6Q6P531 493 aa21.08■□□□□ 0.96
PCDHA1-203ENST00000504120 IPO8O15397 1037 aaKnown RBP21.08■□□□□ 0.96
PCDHA1-203ENST00000504120 SAFB2Q14151 953 aaKnown RBP eCLIP21.07■□□□□ 0.96
PCDHA1-203ENST00000504120 MCCP23508 829 aa21.07■□□□□ 0.96
PCDHA1-203ENST00000504120 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
PCDHA1-203ENST00000504120 RTF1Q92541 710 aaKnown RBP21.06■□□□□ 0.96
PCDHA1-203ENST00000504120 GOLGA6L6A8MZA4 724 aa21.05■□□□□ 0.96
PCDHA1-203ENST00000504120 MLECQ14165 292 aa21.05■□□□□ 0.96
PCDHA1-203ENST00000504120 PLCB2Q00722 1185 aa21.05■□□□□ 0.96
PCDHA1-203ENST00000504120 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
PCDHA1-203ENST00000504120 FHOD3Q2V2M9 1422 aa21.04■□□□□ 0.96
PCDHA1-203ENST00000504120 RCAN3Q9UKA8 241 aa21.04■□□□□ 0.96
PCDHA1-203ENST00000504120 RUSC2Q8N2Y8 1516 aa21.03■□□□□ 0.96
PCDHA1-203ENST00000504120 NPHP1O15259 732 aa21.02■□□□□ 0.96
PCDHA1-203ENST00000504120 SOX12O15370 315 aa21.02■□□□□ 0.96
PCDHA1-203ENST00000504120 NAP1L5Q96NT1 182 aaPredicted RBP21.01■□□□□ 0.95
PCDHA1-203ENST00000504120 STK26Q9P289 416 aa21.01■□□□□ 0.95
PCDHA1-203ENST00000504120 GOLGA6L4A6NEF3 574 aa21.01■□□□□ 0.95
PCDHA1-203ENST00000504120 RBM19Q9Y4C8 960 aaKnown RBP21.01■□□□□ 0.95
PCDHA1-203ENST00000504120 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
PCDHA1-203ENST00000504120 NRDCO43847 1150 aa21■□□□□ 0.95
PCDHA1-203ENST00000504120 GOLGA2Q08379 1002 aa20.99■□□□□ 0.95
PCDHA1-203ENST00000504120 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
PCDHA1-203ENST00000504120 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
PCDHA1-203ENST00000504120 NAP1L2Q9ULW6 460 aaPredicted RBP20.99■□□□□ 0.95
PCDHA1-203ENST00000504120 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
PCDHA1-203ENST00000504120 RWDD1Q9H446 243 aaPredicted RBP20.98■□□□□ 0.95
PCDHA1-203ENST00000504120 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
PCDHA1-203ENST00000504120 TCERG1O14776 1098 aaKnown RBP20.96■□□□□ 0.95
PCDHA1-203ENST00000504120 RSPH4AQ5TD94 716 aa20.95■□□□□ 0.94
PCDHA1-203ENST00000504120 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
PCDHA1-203ENST00000504120 TAOK2Q9UL54 1235 aa20.94■□□□□ 0.94
PCDHA1-203ENST00000504120 L3MBTL2Q969R5 705 aa20.93■□□□□ 0.94
PCDHA1-203ENST00000504120 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
PCDHA1-203ENST00000504120 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
PCDHA1-203ENST00000504120 ITPRIPQ8IWB1 547 aa20.91■□□□□ 0.94
PCDHA1-203ENST00000504120 RTN4Q9NQC3 1192 aaKnown RBP20.91■□□□□ 0.94
PCDHA1-203ENST00000504120 IGF1RP08069 1367 aa20.9■□□□□ 0.94
PCDHA1-203ENST00000504120 PMFBP1Q8TBY8 1022 aa20.89■□□□□ 0.94
PCDHA1-203ENST00000504120 PTMSP20962 102 aa20.89■□□□□ 0.93
PCDHA1-203ENST00000504120 NLRP13Q86W25 1043 aa20.89■□□□□ 0.93
PCDHA1-203ENST00000504120 KIAA1211Q6ZU35 1233 aa20.89■□□□□ 0.93
PCDHA1-203ENST00000504120 SPRYD3Q8NCJ5 442 aa20.89■□□□□ 0.93
PCDHA1-203ENST00000504120 PDE3BQ13370 1112 aa20.88■□□□□ 0.93
PCDHA1-203ENST00000504120 KIF3BO15066 747 aa20.88■□□□□ 0.93
PCDHA1-203ENST00000504120 TERF2IPQ9NYB0 399 aa20.87■□□□□ 0.93
PCDHA1-203ENST00000504120 TRHP20396 242 aaPredicted RBP20.87■□□□□ 0.93
PCDHA1-203ENST00000504120 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
PCDHA1-203ENST00000504120 CHAF1AQ13111 956 aaPredicted RBP20.86■□□□□ 0.93
PCDHA1-203ENST00000504120 GBP4Q96PP9 640 aa20.86■□□□□ 0.93
PCDHA1-203ENST00000504120 HNRNPMP52272 730 aaKnown RBP eCLIP20.86■□□□□ 0.93
PCDHA1-203ENST00000504120 MSNP26038 577 aaKnown RBP20.85■□□□□ 0.93
PCDHA1-203ENST00000504120 APBB1O00213 710 aa20.85■□□□□ 0.93
PCDHA1-203ENST00000504120 DEKP35659 375 aaKnown RBP20.85■□□□□ 0.93
PCDHA1-203ENST00000504120 TULP1O00294 542 aaPredicted RBP20.85■□□□□ 0.93
PCDHA1-203ENST00000504120 PHLDB1Q86UU1 1377 aa20.83■□□□□ 0.93
PCDHA1-203ENST00000504120 SPAG9O60271 1321 aaKnown RBP20.83■□□□□ 0.92
PCDHA1-203ENST00000504120 PAK3O75914 559 aaPredicted RBP20.82■□□□□ 0.92
PCDHA1-203ENST00000504120 STK31Q9BXU1 1019 aa20.81■□□□□ 0.92
PCDHA1-203ENST00000504120 SMC4Q9NTJ3 1288 aa20.81■□□□□ 0.92
PCDHA1-203ENST00000504120 CFTRP13569 1480 aa20.81■□□□□ 0.92
PCDHA1-203ENST00000504120 KIF15Q9NS87 1388 aa20.79■□□□□ 0.92
PCDHA1-203ENST00000504120 HDAC5Q9UQL6 1122 aa20.78■□□□□ 0.92
PCDHA1-203ENST00000504120 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
PCDHA1-203ENST00000504120 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
PCDHA1-203ENST00000504120 CENPJQ9HC77 1338 aaPredicted RBP20.77■□□□□ 0.92
PCDHA1-203ENST00000504120 HMMRO75330 724 aa20.77■□□□□ 0.92
PCDHA1-203ENST00000504120 DRC7Q8IY82 874 aa20.77■□□□□ 0.92
PCDHA1-203ENST00000504120 LMOD3Q0VAK6 560 aa20.77■□□□□ 0.92
PCDHA1-203ENST00000504120 CSB-PGBD3P0DP91 1061 aa20.76■□□□□ 0.91
PCDHA1-203ENST00000504120 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
PCDHA1-203ENST00000504120 WASHC2CQ9Y4E1 1318 aa20.76■□□□□ 0.91
PCDHA1-203ENST00000504120 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
PCDHA1-203ENST00000504120 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
PCDHA1-203ENST00000504120 KIF21BO75037 1637 aa20.74■□□□□ 0.91
PCDHA1-203ENST00000504120 HTATSF1O43719 755 aaKnown RBP20.74■□□□□ 0.91
PCDHA1-203ENST00000504120 SLKQ9H2G2 1235 aaPredicted RBP20.74■□□□□ 0.91
PCDHA1-203ENST00000504120 CCDC146Q8IYE0 955 aa20.73■□□□□ 0.91
PCDHA1-203ENST00000504120 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
PCDHA1-203ENST00000504120 PTPRGP23470 1445 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms