RNA–Protein interactions for RNA: ENST00000504105.1

CSNK1A1P3-201, Transcript of casein kinase 1 alpha 1 pseudogene 3, humanhuman

BASIC

Gene CSNK1A1P3, Length 330 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P3-201ENST00000504105 CRISPLD2Q9H0B8 497 aa15.52■□□□□ 0.08
CSNK1A1P3-201ENST00000504105 TMC2Q8TDI7 906 aa15.5■□□□□ 0.07
CSNK1A1P3-201ENST00000504105 NCKAP5LQ9HCH0 1330 aa15.49■□□□□ 0.07
CSNK1A1P3-201ENST00000504105 POTEJP0CG39 1038 aa15.49■□□□□ 0.07
CSNK1A1P3-201ENST00000504105 SCUBE2Q9NQ36 999 aa15.49■□□□□ 0.07
CSNK1A1P3-201ENST00000504105 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
CSNK1A1P3-201ENST00000504105 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
CSNK1A1P3-201ENST00000504105 WDR70Q9NW82 654 aa15.46■□□□□ 0.07
CSNK1A1P3-201ENST00000504105 KIF3CO14782 793 aa15.44■□□□□ 0.06
CSNK1A1P3-201ENST00000504105 LHX8Q68G74 356 aa15.44■□□□□ 0.06
CSNK1A1P3-201ENST00000504105 LARP6Q9BRS8 491 aaKnown RBP15.44■□□□□ 0.06
CSNK1A1P3-201ENST00000504105 MFSD10Q14728 455 aa15.43■□□□□ 0.06
CSNK1A1P3-201ENST00000504105 C2orf72A6NCS6 295 aa15.42■□□□□ 0.06
CSNK1A1P3-201ENST00000504105 TMEM92Q6UXU6 159 aa15.42■□□□□ 0.06
CSNK1A1P3-201ENST00000504105 DDX27Q96GQ7 796 aaKnown RBP15.42■□□□□ 0.06
CSNK1A1P3-201ENST00000504105 FOXK1P85037 733 aa15.39■□□□□ 0.05
CSNK1A1P3-201ENST00000504105 PPP1R15BQ5SWA1 713 aa15.37■□□□□ 0.05
CSNK1A1P3-201ENST00000504105 DSG2Q14126 1118 aa15.34■□□□□ 0.05
CSNK1A1P3-201ENST00000504105 SLAIN1Q8ND83 568 aa15.34■□□□□ 0.05
CSNK1A1P3-201ENST00000504105 OTUD5Q96G74 571 aa15.31■□□□□ 0.04
CSNK1A1P3-201ENST00000504105 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
CSNK1A1P3-201ENST00000504105 PLPP6Q8IY26 295 aa15.3■□□□□ 0.04
CSNK1A1P3-201ENST00000504105 E2F4Q16254 413 aa15.29■□□□□ 0.04
CSNK1A1P3-201ENST00000504105 CAMK2BQ13554 666 aa15.25■□□□□ 0.03
CSNK1A1P3-201ENST00000504105 KCNV2Q8TDN2 545 aa15.19■□□□□ 0.02
CSNK1A1P3-201ENST00000504105 SNPHO15079 494 aa15.18■□□□□ 0.02
CSNK1A1P3-201ENST00000504105 SLC34A2O95436 690 aa15.18■□□□□ 0.02
CSNK1A1P3-201ENST00000504105 DOK7Q18PE1 504 aa15.17■□□□□ 0.02
CSNK1A1P3-201ENST00000504105 ARHGEF1Q92888 912 aaKnown RBP15.16■□□□□ 0.02
CSNK1A1P3-201ENST00000504105 ARIH1Q9Y4X5 557 aaPredicted RBP15.16■□□□□ 0.02
CSNK1A1P3-201ENST00000504105 EMILIN3Q9NT22 766 aa15.13■□□□□ 0.01
CSNK1A1P3-201ENST00000504105 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
CSNK1A1P3-201ENST00000504105 OXER1Q8TDS5 423 aa15.12■□□□□ 0.01
CSNK1A1P3-201ENST00000504105 PTCD2Q8WV60 388 aaKnown RBP15.12■□□□□ 0.01
CSNK1A1P3-201ENST00000504105 TBC1D12O60347 775 aa15.11■□□□□ 0.01
CSNK1A1P3-201ENST00000504105 HOXB3P14651 431 aaPredicted RBP15.1■□□□□ 0.01
CSNK1A1P3-201ENST00000504105 ZSWIM6Q9HCJ5 1215 aa15.08■□□□□ 0
CSNK1A1P3-201ENST00000504105 MAP3K9P80192 1104 aa15.07■□□□□ 0
CSNK1A1P3-201ENST00000504105 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
CSNK1A1P3-201ENST00000504105 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
CSNK1A1P3-201ENST00000504105 DPYSL4O14531 572 aa15.05■□□□□ -0
CSNK1A1P3-201ENST00000504105 SPDYE16A6NNV3 312 aaPredicted RBP15.03■□□□□ -0
CSNK1A1P3-201ENST00000504105 PCDHGA4Q9Y5G9 962 aa15.03■□□□□ -0
CSNK1A1P3-201ENST00000504105 NBR1Q14596 966 aa15.02■□□□□ -0
CSNK1A1P3-201ENST00000504105 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
CSNK1A1P3-201ENST00000504105 PDIA6Q15084 440 aa15□□□□□ -0.01
CSNK1A1P3-201ENST00000504105 BCANQ96GW7 911 aa15□□□□□ -0.01
CSNK1A1P3-201ENST00000504105 GPR153Q6NV75 609 aa14.96□□□□□ -0.01
CSNK1A1P3-201ENST00000504105 EVI5O60447 810 aa14.95□□□□□ -0.02
CSNK1A1P3-201ENST00000504105 ARSIQ5FYB1 569 aa14.94□□□□□ -0.02
CSNK1A1P3-201ENST00000504105 HOXB1P14653 301 aaPredicted RBP14.93□□□□□ -0.02
CSNK1A1P3-201ENST00000504105 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
CSNK1A1P3-201ENST00000504105 KDM4FA0A1W2PPD8 638 aa14.89□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 NUDT7P0C024 238 aa14.88□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 PTGER2P43116 358 aa14.88□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 SEMA3EO15041 775 aa14.87□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 ST18O60284 1047 aa14.87□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 KHSRPQ92945 711 aaKnown RBP eCLIP14.86□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 TESPA1A2RU30 521 aaPredicted RBP14.85□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 FAM163AQ96GL9 167 aaPredicted RBP14.85□□□□□ -0.03
CSNK1A1P3-201ENST00000504105 SMYD5Q6GMV2 418 aa14.83□□□□□ -0.04
CSNK1A1P3-201ENST00000504105 TULP1O00294 542 aaPredicted RBP14.82□□□□□ -0.04
CSNK1A1P3-201ENST00000504105 PSDA5PKW4 1024 aaPredicted RBP14.8□□□□□ -0.04
CSNK1A1P3-201ENST00000504105 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
CSNK1A1P3-201ENST00000504105 LHX6Q9UPM6 363 aa14.78□□□□□ -0.04
CSNK1A1P3-201ENST00000504105 PHF14O94880 888 aa14.77□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 DDX12PQ92771 950 aa14.76□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 EPAS1Q99814 870 aa14.76□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 GRXCR2A6NFK2 248 aa14.75□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 FOSBP53539 338 aa14.74□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 EMP3P54852 163 aa14.74□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 LCE2DQ5TA82 110 aaPredicted RBP14.72□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 ERBB3P21860 1342 aa14.71□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 TYW1BQ6NUM6 668 aa14.71□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 ZNF454Q8N9F8 522 aa14.71□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 FBXW7Q969H0 707 aa14.71□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 MARVELD3Q96A59 401 aa14.71□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 PCDHGA10Q9Y5H3 936 aa14.71□□□□□ -0.05
CSNK1A1P3-201ENST00000504105 PPP4R3BQ5MIZ7 849 aa14.7□□□□□ -0.06
CSNK1A1P3-201ENST00000504105 OSBPP22059 807 aa14.69□□□□□ -0.06
CSNK1A1P3-201ENST00000504105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.67□□□□□ -0.06
CSNK1A1P3-201ENST00000504105 ZDHHC16Q969W1 377 aa14.67□□□□□ -0.06
CSNK1A1P3-201ENST00000504105 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
CSNK1A1P3-201ENST00000504105 VARS2Q5ST30 1063 aaKnown RBP14.64□□□□□ -0.07
CSNK1A1P3-201ENST00000504105 FAM205CA6NFA0 338 aa14.63□□□□□ -0.07
CSNK1A1P3-201ENST00000504105 LMOD2Q6P5Q4 547 aa14.63□□□□□ -0.07
CSNK1A1P3-201ENST00000504105 MAP3K7O43318 606 aa14.59□□□□□ -0.07
CSNK1A1P3-201ENST00000504105 HS3ST6Q96QI5 342 aa14.59□□□□□ -0.07
CSNK1A1P3-201ENST00000504105 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
CSNK1A1P3-201ENST00000504105 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 RBM33Q96EV2 1170 aaKnown RBP14.58□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 ADAM33Q9BZ11 813 aa14.58□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 PRIM1P49642 420 aaKnown RBP14.56□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 ZNF687Q8N1G0 1237 aa14.56□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 PTPREP23469 700 aa14.54□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 PBX2P40425 430 aa14.54□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 C6orf132Q5T0Z8 1188 aa14.54□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 KCNH8Q96L42 1107 aa14.54□□□□□ -0.08
CSNK1A1P3-201ENST00000504105 NUTM2FA1L443 756 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms