RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MYO3AQ8NEV4 1616 aa5.04□□□□□ -1.6
NEDD4-204ENST00000503468 DIP2AQ14689 1571 aa5.04□□□□□ -1.6
NEDD4-204ENST00000503468 SETD1AO15047 1707 aaKnown RBP5.04□□□□□ -1.6
NEDD4-204ENST00000503468 CDC42BPAQ5VT25 1732 aa5.04□□□□□ -1.6
NEDD4-204ENST00000503468 FRMPD1Q5SYB0 1578 aa5.04□□□□□ -1.6
NEDD4-204ENST00000503468 MST1RQ04912 1400 aa5.04□□□□□ -1.6
NEDD4-204ENST00000503468 PHLDB1Q86UU1 1377 aa5.03□□□□□ -1.6
NEDD4-204ENST00000503468 RTEL1-TNFRSF6BF6WH68 1400 aa5.03□□□□□ -1.6
NEDD4-204ENST00000503468 INSRP06213 1382 aa5.03□□□□□ -1.6
NEDD4-204ENST00000503468 ABCC3O15438 1527 aa5.03□□□□□ -1.6
NEDD4-204ENST00000503468 MROH2AA6NES4 1674 aa5.03□□□□□ -1.6
NEDD4-204ENST00000503468 EHBP1L1Q8N3D4 1523 aa5.03□□□□□ -1.6
NEDD4-204ENST00000503468 CLIP1P30622 1438 aa5.02□□□□□ -1.61
NEDD4-204ENST00000503468 ZC3H13Q5T200 1668 aaKnown RBP5.01□□□□□ -1.61
NEDD4-204ENST00000503468 MLH3Q9UHC1 1453 aa5.01□□□□□ -1.61
NEDD4-204ENST00000503468 RICTORQ6R327 1708 aa5.01□□□□□ -1.61
NEDD4-204ENST00000503468 FHOD3Q2V2M9 1422 aa5.01□□□□□ -1.61
NEDD4-204ENST00000503468 CEP152O94986 1710 aa5□□□□□ -1.61
NEDD4-204ENST00000503468 PHRF1Q9P1Y6 1649 aaKnown RBP5□□□□□ -1.61
NEDD4-204ENST00000503468 PTPRTO14522 1441 aa4.99□□□□□ -1.61
NEDD4-204ENST00000503468 ITSN2Q9NZM3 1697 aa4.99□□□□□ -1.61
NEDD4-204ENST00000503468 CDC42BPBQ9Y5S2 1711 aa4.99□□□□□ -1.61
NEDD4-204ENST00000503468 CHD1O14646 1710 aa4.99□□□□□ -1.61
NEDD4-204ENST00000503468 SYCP2Q9BX26 1530 aa4.99□□□□□ -1.61
NEDD4-204ENST00000503468 ABCC1P33527 1531 aa4.98□□□□□ -1.61
NEDD4-204ENST00000503468 HFM1A2PYH4 1435 aa4.98□□□□□ -1.61
NEDD4-204ENST00000503468 SOGA1O94964 1423 aa4.97□□□□□ -1.61
NEDD4-204ENST00000503468 NEO1Q92859 1461 aa4.97□□□□□ -1.61
NEDD4-204ENST00000503468 ZFYVE9O95405 1425 aa4.97□□□□□ -1.61
NEDD4-204ENST00000503468 UHRF1BP1Q6BDS2 1440 aa4.97□□□□□ -1.61
NEDD4-204ENST00000503468 GPRASP1Q5JY77 1395 aa4.96□□□□□ -1.61
NEDD4-204ENST00000503468 SAMD9LQ8IVG5 1584 aa4.96□□□□□ -1.61
NEDD4-204ENST00000503468 FMN1Q68DA7 1419 aa4.96□□□□□ -1.62
NEDD4-204ENST00000503468 AEBP2Q6ZN18 517 aaPredicted RBP4.96□□□□□ -1.62
NEDD4-204ENST00000503468 LRRC9Q6ZRR7 1453 aa4.96□□□□□ -1.62
NEDD4-204ENST00000503468 ADGBQ8N7X0 1667 aa4.96□□□□□ -1.62
NEDD4-204ENST00000503468 CICQ96RK0 1608 aaPredicted RBP4.96□□□□□ -1.62
NEDD4-204ENST00000503468 E9PCH4 1651 aa4.95□□□□□ -1.62
NEDD4-204ENST00000503468 RIMS1Q86UR5 1692 aaKnown RBP4.95□□□□□ -1.62
NEDD4-204ENST00000503468 PLEKHG2Q9H7P9 1386 aa4.95□□□□□ -1.62
NEDD4-204ENST00000503468 CAMSAP1Q5T5Y3 1602 aa4.95□□□□□ -1.62
NEDD4-204ENST00000503468 CDC42BPGQ6DT37 1551 aa4.94□□□□□ -1.62
NEDD4-204ENST00000503468 MED14O60244 1454 aa4.94□□□□□ -1.62
NEDD4-204ENST00000503468 KIF13AQ9H1H9 1805 aa4.94□□□□□ -1.62
NEDD4-204ENST00000503468 DIP2BQ9P265 1576 aa4.94□□□□□ -1.62
NEDD4-204ENST00000503468 RPRD2Q5VT52 1461 aaKnown RBP4.93□□□□□ -1.62
NEDD4-204ENST00000503468 SPATA31E1Q6ZUB1 1445 aa4.93□□□□□ -1.62
NEDD4-204ENST00000503468 ZNF142P52746 1687 aaPredicted RBP4.93□□□□□ -1.62
NEDD4-204ENST00000503468 SBNO2Q9Y2G9 1366 aa4.93□□□□□ -1.62
NEDD4-204ENST00000503468 USP32Q8NFA0 1604 aa4.92□□□□□ -1.62
NEDD4-204ENST00000503468 ABCC6O95255 1503 aa4.92□□□□□ -1.62
NEDD4-204ENST00000503468 PLA2R1Q13018 1463 aa4.92□□□□□ -1.62
NEDD4-204ENST00000503468 ANKRD26Q9UPS8 1709 aa4.91□□□□□ -1.62
NEDD4-204ENST00000503468 CFAP74Q9C0B2 1584 aa4.91□□□□□ -1.62
NEDD4-204ENST00000503468 FANCAO15360 1455 aa4.91□□□□□ -1.62
NEDD4-204ENST00000503468 ZFYVE16Q7Z3T8 1539 aa4.91□□□□□ -1.62
NEDD4-204ENST00000503468 KIDINS220Q9ULH0 1771 aa4.91□□□□□ -1.62
NEDD4-204ENST00000503468 SPATA31D1Q6ZQQ2 1576 aa4.9□□□□□ -1.62
NEDD4-204ENST00000503468 CLTCQ00610 1675 aaKnown RBP4.9□□□□□ -1.62
NEDD4-204ENST00000503468 TROQ12816 1431 aaPredicted RBP4.9□□□□□ -1.62
NEDD4-204ENST00000503468 ADGRB2O60241 1585 aa4.9□□□□□ -1.63
NEDD4-204ENST00000503468 SETBP1Q9Y6X0 1596 aa4.89□□□□□ -1.63
NEDD4-204ENST00000503468 KNDC1Q76NI1 1749 aa4.89□□□□□ -1.63
NEDD4-204ENST00000503468 ADAMTS7Q9UKP4 1686 aa4.88□□□□□ -1.63
NEDD4-204ENST00000503468 ZCCHC11Q5TAX3 1644 aaKnown RBP4.88□□□□□ -1.63
NEDD4-204ENST00000503468 TECPR2O15040 1411 aa4.88□□□□□ -1.63
NEDD4-204ENST00000503468 GPATCH8Q9UKJ3 1502 aaKnown RBP4.88□□□□□ -1.63
NEDD4-204ENST00000503468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.88□□□□□ -1.63
NEDD4-204ENST00000503468 TIMELESSQ9UNS1 1208 aa4.88□□□□□ -1.63
NEDD4-204ENST00000503468 COL17A1Q9UMD9 1497 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-204ENST00000503468 SUPT6HQ7KZ85 1726 aaKnown RBP4.87□□□□□ -1.63
NEDD4-204ENST00000503468 CDK13Q14004 1512 aaKnown RBP4.87□□□□□ -1.63
NEDD4-204ENST00000503468 ATP10BO94823 1461 aa4.87□□□□□ -1.63
NEDD4-204ENST00000503468 ARHGAP23Q9P227 1491 aa4.87□□□□□ -1.63
NEDD4-204ENST00000503468 TET3O43151 1660 aa4.87□□□□□ -1.63
NEDD4-204ENST00000503468 PLEKHH2Q8IVE3 1493 aa4.86□□□□□ -1.63
NEDD4-204ENST00000503468 NOS1P29475 1434 aa4.86□□□□□ -1.63
NEDD4-204ENST00000503468 TRPM1Q7Z4N2 1603 aa4.86□□□□□ -1.63
NEDD4-204ENST00000503468 ADGRB1O14514 1584 aa4.86□□□□□ -1.63
NEDD4-204ENST00000503468 CARMIL1Q5VZK9 1371 aa4.85□□□□□ -1.63
NEDD4-204ENST00000503468 CCDC141Q6ZP82 1450 aa4.85□□□□□ -1.63
NEDD4-204ENST00000503468 MYOM2P54296 1465 aa4.85□□□□□ -1.63
NEDD4-204ENST00000503468 ADAMTSL3P82987 1691 aa4.85□□□□□ -1.63
NEDD4-204ENST00000503468 IQGAP1P46940 1657 aa4.84□□□□□ -1.63
NEDD4-204ENST00000503468 CDK12Q9NYV4 1490 aaPredicted RBP4.84□□□□□ -1.63
NEDD4-204ENST00000503468 TTC37Q6PGP7 1564 aa4.84□□□□□ -1.63
NEDD4-204ENST00000503468 DNAJC5BQ9UF47 199 aa4.84□□□□□ -1.63
NEDD4-204ENST00000503468 CAMTA1Q9Y6Y1 1673 aa4.84□□□□□ -1.63
NEDD4-204ENST00000503468 SIGLEC1Q9BZZ2 1709 aa4.84□□□□□ -1.63
NEDD4-204ENST00000503468 NCAPD2Q15021 1401 aa4.84□□□□□ -1.64
NEDD4-204ENST00000503468 PELP1Q8IZL8 1130 aaKnown RBP4.83□□□□□ -1.64
NEDD4-204ENST00000503468 IBTKQ9P2D0 1353 aaPredicted RBP4.83□□□□□ -1.64
NEDD4-204ENST00000503468 MYO5CQ9NQX4 1742 aa4.83□□□□□ -1.64
NEDD4-204ENST00000503468 NAIPQ13075 1403 aa4.83□□□□□ -1.64
NEDD4-204ENST00000503468 NWD1Q149M9 1564 aa4.83□□□□□ -1.64
NEDD4-204ENST00000503468 MYOM3Q5VTT5 1437 aa4.83□□□□□ -1.64
NEDD4-204ENST00000503468 TRPM2O94759 1503 aa4.83□□□□□ -1.64
NEDD4-204ENST00000503468 DIP2CQ9Y2E4 1556 aa4.83□□□□□ -1.64
NEDD4-204ENST00000503468 SPHKAPQ2M3C7 1700 aa4.83□□□□□ -1.64
NEDD4-204ENST00000503468 FAM135BQ49AJ0 1406 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms