RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ADGRL1O94910 1474 aa28.76■■■□□ 2.19
PDLIM7-209ENST00000503346 PREX2Q70Z35 1606 aa28.76■■■□□ 2.19
PDLIM7-209ENST00000503346 SCAPERQ9BY12 1400 aa28.74■■■□□ 2.19
PDLIM7-209ENST00000503346 FRMPD1Q5SYB0 1578 aa28.74■■■□□ 2.19
PDLIM7-209ENST00000503346 LRRC9Q6ZRR7 1453 aa28.73■■■□□ 2.19
PDLIM7-209ENST00000503346 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
PDLIM7-209ENST00000503346 CDC42BPBQ9Y5S2 1711 aa28.72■■■□□ 2.19
PDLIM7-209ENST00000503346 CDC42BPAQ5VT25 1732 aa28.7■■■□□ 2.19
PDLIM7-209ENST00000503346 POGZQ7Z3K3 1410 aa28.69■■■□□ 2.18
PDLIM7-209ENST00000503346 KANK4Q5T7N3 995 aaPredicted RBP28.68■■■□□ 2.18
PDLIM7-209ENST00000503346 NCOA2Q15596 1464 aa28.67■■■□□ 2.18
PDLIM7-209ENST00000503346 APLP2Q06481 763 aa28.67■■■□□ 2.18
PDLIM7-209ENST00000503346 RICTORQ6R327 1708 aa28.66■■■□□ 2.18
PDLIM7-209ENST00000503346 CFDP1Q9UEE9 299 aaPredicted RBP28.65■■■□□ 2.18
PDLIM7-209ENST00000503346 SUPT6HQ7KZ85 1726 aaKnown RBP28.64■■■□□ 2.18
PDLIM7-209ENST00000503346 ZMYM4Q5VZL5 1548 aa28.64■■■□□ 2.17
PDLIM7-209ENST00000503346 ABCC1P33527 1531 aa28.63■■■□□ 2.17
PDLIM7-209ENST00000503346 ZNF777Q9ULD5 760 aaPredicted RBP28.6■■■□□ 2.17
PDLIM7-209ENST00000503346 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
PDLIM7-209ENST00000503346 MAGI2Q86UL8 1455 aa28.59■■■□□ 2.17
PDLIM7-209ENST00000503346 ARHGEF12Q9NZN5 1544 aa28.59■■■□□ 2.17
PDLIM7-209ENST00000503346 SAMD9LQ8IVG5 1584 aa28.58■■■□□ 2.17
PDLIM7-209ENST00000503346 KIAA1107Q9UPP5 1409 aa28.57■■■□□ 2.16
PDLIM7-209ENST00000503346 PLEKHH2Q8IVE3 1493 aa28.56■■■□□ 2.16
PDLIM7-209ENST00000503346 AFAP1Q8N556 730 aa28.56■■■□□ 2.16
PDLIM7-209ENST00000503346 ITSN2Q9NZM3 1697 aa28.56■■■□□ 2.16
PDLIM7-209ENST00000503346 TRAPPC8Q9Y2L5 1435 aa28.55■■■□□ 2.16
PDLIM7-209ENST00000503346 KDM5CP41229 1560 aa28.54■■■□□ 2.16
PDLIM7-209ENST00000503346 ARHGEF40Q8TER5 1519 aa28.54■■■□□ 2.16
PDLIM7-209ENST00000503346 ZFYVE16Q7Z3T8 1539 aa28.52■■■□□ 2.16
PDLIM7-209ENST00000503346 YEATS2Q9ULM3 1422 aa28.52■■■□□ 2.16
PDLIM7-209ENST00000503346 SYCP2Q9BX26 1530 aa28.5■■■□□ 2.15
PDLIM7-209ENST00000503346 ZNF644Q9H582 1327 aaPredicted RBP28.49■■■□□ 2.15
PDLIM7-209ENST00000503346 KDM4FA0A1W2PPD8 638 aa28.49■■■□□ 2.15
PDLIM7-209ENST00000503346 HNRNPMP52272 730 aaKnown RBP eCLIP28.49■■■□□ 2.154e-8■■■■■ 27.6
PDLIM7-209ENST00000503346 MLH3Q9UHC1 1453 aa28.47■■■□□ 2.15
PDLIM7-209ENST00000503346 MYOM3Q5VTT5 1437 aa28.45■■■□□ 2.15
PDLIM7-209ENST00000503346 MBD5Q9P267 1494 aa28.44■■■□□ 2.14
PDLIM7-209ENST00000503346 HECW2Q9P2P5 1572 aa28.44■■■□□ 2.14
PDLIM7-209ENST00000503346 MIA2Q96PC5 1412 aa28.43■■■□□ 2.14
PDLIM7-209ENST00000503346 CAMSAP2Q08AD1 1489 aa28.42■■■□□ 2.14
PDLIM7-209ENST00000503346 ATP10AO60312 1499 aa28.41■■■□□ 2.14
PDLIM7-209ENST00000503346 MYT1LQ9UL68 1186 aa28.39■■■□□ 2.14
PDLIM7-209ENST00000503346 SPAG9O60271 1321 aaKnown RBP28.39■■■□□ 2.13
PDLIM7-209ENST00000503346 C9orf84Q5VXU9 1444 aa28.38■■■□□ 2.13
PDLIM7-209ENST00000503346 RSPH4AQ5TD94 716 aa28.36■■■□□ 2.13
PDLIM7-209ENST00000503346 ARID4BQ4LE39 1312 aaPredicted RBP28.36■■■□□ 2.13
PDLIM7-209ENST00000503346 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
PDLIM7-209ENST00000503346 DIP2CQ9Y2E4 1556 aa28.35■■■□□ 2.13
PDLIM7-209ENST00000503346 CCDC141Q6ZP82 1450 aa28.33■■■□□ 2.13
PDLIM7-209ENST00000503346 KIDINS220Q9ULH0 1771 aa28.32■■■□□ 2.12
PDLIM7-209ENST00000503346 ABCA6Q8N139 1617 aa28.32■■■□□ 2.12
PDLIM7-209ENST00000503346 REREQ9P2R6 1566 aa28.31■■■□□ 2.12
PDLIM7-209ENST00000503346 ARHGEF5Q12774 1597 aa28.3■■■□□ 2.12
PDLIM7-209ENST00000503346 INO80Q9ULG1 1556 aaPredicted RBP28.3■■■□□ 2.12
PDLIM7-209ENST00000503346 ATP7AQ04656 1500 aa28.3■■■□□ 2.12
PDLIM7-209ENST00000503346 RTEL1-TNFRSF6BF6WH68 1400 aa28.29■■■□□ 2.12
PDLIM7-209ENST00000503346 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
PDLIM7-209ENST00000503346 SIGLEC1Q9BZZ2 1709 aa28.29■■■□□ 2.12
PDLIM7-209ENST00000503346 BCORL1Q5H9F3 1711 aa28.26■■■□□ 2.12
PDLIM7-209ENST00000503346 ADAMTSL3P82987 1691 aa28.25■■■□□ 2.11
PDLIM7-209ENST00000503346 TCOF1Q13428 1488 aaKnown RBP28.24■■■□□ 2.11
PDLIM7-209ENST00000503346 PTPN23Q9H3S7 1636 aa28.23■■■□□ 2.11
PDLIM7-209ENST00000503346 AGLP35573 1532 aa28.23■■■□□ 2.11
PDLIM7-209ENST00000503346 TSPY4P0CV99 314 aa28.22■■■□□ 2.11
PDLIM7-209ENST00000503346 TSPY10P0CW01 314 aa28.22■■■□□ 2.11
PDLIM7-209ENST00000503346 A2MP01023 1474 aa28.18■■■□□ 2.1
PDLIM7-209ENST00000503346 MLECQ14165 292 aa28.17■■■□□ 2.1
PDLIM7-209ENST00000503346 PLXNC1O60486 1568 aa28.16■■■□□ 2.1
PDLIM7-209ENST00000503346 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
PDLIM7-209ENST00000503346 MAST1Q9Y2H9 1570 aa28.15■■■□□ 2.1
PDLIM7-209ENST00000503346 MADDQ8WXG6 1647 aa28.14■■■□□ 2.1
PDLIM7-209ENST00000503346 ABCC5O15440 1437 aa28.14■■■□□ 2.1
PDLIM7-209ENST00000503346 PTPRMP28827 1452 aa28.12■■■□□ 2.09
PDLIM7-209ENST00000503346 DHX29Q7Z478 1369 aaKnown RBP28.11■■■□□ 2.09
PDLIM7-209ENST00000503346 ADGBQ8N7X0 1667 aa28.11■■■□□ 2.09
PDLIM7-209ENST00000503346 SHANK2Q9UPX8 1470 aa28.11■■■□□ 2.09
PDLIM7-209ENST00000503346 DAPK1P53355 1430 aa28.1■■■□□ 2.09
PDLIM7-209ENST00000503346 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
PDLIM7-209ENST00000503346 FAM50AQ14320 339 aaKnown RBP28.07■■■□□ 2.08
PDLIM7-209ENST00000503346 RIMS1Q86UR5 1692 aaKnown RBP28.03■■■□□ 2.08
PDLIM7-209ENST00000503346 CROCC2H7BZ55 1655 aa28.03■■■□□ 2.08
PDLIM7-209ENST00000503346 FER1L4A9Z1Z3 1794 aa28.01■■■□□ 2.08
PDLIM7-209ENST00000503346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.99■■■□□ 2.07
PDLIM7-209ENST00000503346 PPP6R1Q9UPN7 881 aa27.97■■■□□ 2.07
PDLIM7-209ENST00000503346 CNTLNQ9NXG0 1405 aa27.97■■■□□ 2.07
PDLIM7-209ENST00000503346 KIF15Q9NS87 1388 aa27.97■■■□□ 2.07
PDLIM7-209ENST00000503346 KIF3BO15066 747 aa27.96■■■□□ 2.07
PDLIM7-209ENST00000503346 GGT6Q6P531 493 aa27.96■■■□□ 2.07
PDLIM7-209ENST00000503346 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
PDLIM7-209ENST00000503346 DUOX2Q9NRD8 1548 aa27.95■■■□□ 2.06
PDLIM7-209ENST00000503346 ANKRD30AQ9BXX3 1397 aa27.95■■■□□ 2.06
PDLIM7-209ENST00000503346 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
PDLIM7-209ENST00000503346 CHIC2Q9UKJ5 165 aa27.94■■■□□ 2.06
PDLIM7-209ENST00000503346 ADGRL2O95490 1459 aa27.94■■■□□ 2.06
PDLIM7-209ENST00000503346 RRP7BPQ9NSQ0 103 aa27.93■■■□□ 2.06
PDLIM7-209ENST00000503346 NCOA1Q15788 1441 aa27.92■■■□□ 2.06
PDLIM7-209ENST00000503346 PTPRKQ15262 1439 aa27.91■■■□□ 2.06
PDLIM7-209ENST00000503346 ERBINQ96RT1 1412 aa27.89■■■□□ 2.06
PDLIM7-209ENST00000503346 CEBPAP49715 358 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms