RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 SCAPERQ9BY12 1400 aa39.85■■■■□ 3.97
TRIO-204ENST00000502816 POGZQ7Z3K3 1410 aa39.82■■■■□ 3.96
TRIO-204ENST00000502816 MAGI2Q86UL8 1455 aa39.81■■■■□ 3.96
TRIO-204ENST00000502816 PREX2Q70Z35 1606 aa39.81■■■■□ 3.96
TRIO-204ENST00000502816 ARHGAP5Q13017 1502 aa39.81■■■■□ 3.96
TRIO-204ENST00000502816 ARHGEF40Q8TER5 1519 aa39.81■■■■□ 3.96
TRIO-204ENST00000502816 CDC42BPAQ5VT25 1732 aa39.77■■■■□ 3.96
TRIO-204ENST00000502816 ZFYVE16Q7Z3T8 1539 aa39.7■■■■□ 3.95
TRIO-204ENST00000502816 ZNF518AQ6AHZ1 1483 aa39.68■■■■□ 3.94
TRIO-204ENST00000502816 ADAMTSL3P82987 1691 aa39.67■■■■□ 3.94
TRIO-204ENST00000502816 KDM5CP41229 1560 aa39.66■■■■□ 3.94
TRIO-204ENST00000502816 YEATS2Q9ULM3 1422 aa39.65■■■■□ 3.94
TRIO-204ENST00000502816 GPATCH8Q9UKJ3 1502 aaKnown RBP39.65■■■■□ 3.94
TRIO-204ENST00000502816 MTUS2Q5JR59 1369 aa39.64■■■■□ 3.94
TRIO-204ENST00000502816 BCORL1Q5H9F3 1711 aa39.64■■■■□ 3.94
TRIO-204ENST00000502816 ABCC1P33527 1531 aa39.63■■■■□ 3.93
TRIO-204ENST00000502816 EHBP1L1Q8N3D4 1523 aa39.6■■■■□ 3.93
TRIO-204ENST00000502816 VPS8Q8N3P4 1428 aa39.6■■■■□ 3.93
TRIO-204ENST00000502816 ARHGEF12Q9NZN5 1544 aa39.59■■■■□ 3.93
TRIO-204ENST00000502816 ITSN2Q9NZM3 1697 aa39.57■■■■□ 3.93
TRIO-204ENST00000502816 AFAP1Q8N556 730 aa39.57■■■■□ 3.93
TRIO-204ENST00000502816 SIGLEC1Q9BZZ2 1709 aa39.55■■■■□ 3.92
TRIO-204ENST00000502816 ATP10AO60312 1499 aa39.54■■■■□ 3.92
TRIO-204ENST00000502816 SAMD9LQ8IVG5 1584 aa39.52■■■■□ 3.92
TRIO-204ENST00000502816 MLH3Q9UHC1 1453 aa39.52■■■■□ 3.92
TRIO-204ENST00000502816 TRAPPC8Q9Y2L5 1435 aa39.51■■■■□ 3.92
TRIO-204ENST00000502816 CCNB3Q8WWL7 1395 aa39.51■■■■□ 3.92
TRIO-204ENST00000502816 ARID4BQ4LE39 1312 aaPredicted RBP39.51■■■■□ 3.92
TRIO-204ENST00000502816 TIAM1Q13009 1591 aa39.5■■■■□ 3.91
TRIO-204ENST00000502816 HECW2Q9P2P5 1572 aa39.5■■■■□ 3.91
TRIO-204ENST00000502816 C9orf84Q5VXU9 1444 aa39.47■■■■□ 3.91
TRIO-204ENST00000502816 KIAA1107Q9UPP5 1409 aa39.46■■■■□ 3.91
TRIO-204ENST00000502816 PTPRMP28827 1452 aa39.44■■■■□ 3.9
TRIO-204ENST00000502816 MADDQ8WXG6 1647 aa39.44■■■■□ 3.9
TRIO-204ENST00000502816 CFDP1Q9UEE9 299 aaPredicted RBP39.44■■■■□ 3.9
TRIO-204ENST00000502816 MAP3K1Q13233 1512 aa39.43■■■■□ 3.9
TRIO-204ENST00000502816 PLEKHH2Q8IVE3 1493 aa39.43■■■■□ 3.9
TRIO-204ENST00000502816 REREQ9P2R6 1566 aa39.42■■■■□ 3.9
TRIO-204ENST00000502816 DIP2CQ9Y2E4 1556 aa39.41■■■■□ 3.9
TRIO-204ENST00000502816 SUPT6HQ7KZ85 1726 aaKnown RBP39.4■■■■□ 3.9
TRIO-204ENST00000502816 ZNF777Q9ULD5 760 aaPredicted RBP39.39■■■■□ 3.9
TRIO-204ENST00000502816 SYCP2Q9BX26 1530 aa39.39■■■■□ 3.9
TRIO-204ENST00000502816 KIDINS220Q9ULH0 1771 aa39.37■■■■□ 3.89
TRIO-204ENST00000502816 ABCA6Q8N139 1617 aa39.36■■■■□ 3.89
TRIO-204ENST00000502816 NCOA2Q15596 1464 aa39.35■■■■□ 3.89
TRIO-204ENST00000502816 LRRC9Q6ZRR7 1453 aa39.35■■■■□ 3.89
TRIO-204ENST00000502816 HNRNPMP52272 730 aaKnown RBP eCLIP39.31■■■■□ 3.885e-7■■■□□ 17.6
TRIO-204ENST00000502816 RIMS1Q86UR5 1692 aaKnown RBP39.3■■■■□ 3.88
TRIO-204ENST00000502816 AGLP35573 1532 aa39.27■■■■□ 3.88
TRIO-204ENST00000502816 MYT1LQ9UL68 1186 aa39.26■■■■□ 3.88
TRIO-204ENST00000502816 MBD5Q9P267 1494 aa39.24■■■■□ 3.87
TRIO-204ENST00000502816 FER1L4A9Z1Z3 1794 aa39.24■■■■□ 3.87
TRIO-204ENST00000502816 SPAG9O60271 1321 aaKnown RBP39.22■■■■□ 3.87
TRIO-204ENST00000502816 ZNF644Q9H582 1327 aaPredicted RBP39.22■■■■□ 3.87
TRIO-204ENST00000502816 INO80Q9ULG1 1556 aaPredicted RBP39.21■■■■□ 3.87
TRIO-204ENST00000502816 MLECQ14165 292 aa39.19■■■■□ 3.86
TRIO-204ENST00000502816 KANK4Q5T7N3 995 aaPredicted RBP39.19■■■■□ 3.86
TRIO-204ENST00000502816 ATP7AQ04656 1500 aa39.18■■■■□ 3.86
TRIO-204ENST00000502816 CAMSAP2Q08AD1 1489 aa39.11■■■■□ 3.85
TRIO-204ENST00000502816 RTEL1-TNFRSF6BF6WH68 1400 aa39.1■■■■□ 3.85
TRIO-204ENST00000502816 RSPH4AQ5TD94 716 aa39.1■■■■□ 3.85
TRIO-204ENST00000502816 PLXNC1O60486 1568 aa39.07■■■■□ 3.84
TRIO-204ENST00000502816 ARHGEF5Q12774 1597 aa39.04■■■■□ 3.84
TRIO-204ENST00000502816 ADGBQ8N7X0 1667 aa39.03■■■■□ 3.84
TRIO-204ENST00000502816 CCDC141Q6ZP82 1450 aa39.03■■■■□ 3.84
TRIO-204ENST00000502816 MIA2Q96PC5 1412 aa39.02■■■■□ 3.84
TRIO-204ENST00000502816 A2MP01023 1474 aa39.02■■■■□ 3.84
TRIO-204ENST00000502816 APLP2Q06481 763 aa39.01■■■■□ 3.84
TRIO-204ENST00000502816 MYOM3Q5VTT5 1437 aa39■■■■□ 3.83
TRIO-204ENST00000502816 LMTK3Q96Q04 1460 aa38.98■■■■□ 3.83
TRIO-204ENST00000502816 CNTLNQ9NXG0 1405 aa38.91■■■■□ 3.82
TRIO-204ENST00000502816 C3P01024 1663 aa38.88■■■■□ 3.81
TRIO-204ENST00000502816 DHX29Q7Z478 1369 aaKnown RBP38.88■■■■□ 3.81
TRIO-204ENST00000502816 CEBPAP49715 358 aaPredicted RBP38.87■■■■□ 3.81
TRIO-204ENST00000502816 SETD1BQ9UPS6 1966 aaKnown RBP38.87■■■■□ 3.81
TRIO-204ENST00000502816 MROH2AA6NES4 1674 aa38.86■■■■□ 3.81
TRIO-204ENST00000502816 MAST1Q9Y2H9 1570 aa38.85■■■■□ 3.81
TRIO-204ENST00000502816 TSPY4P0CV99 314 aa38.84■■■■□ 3.81
TRIO-204ENST00000502816 TSPY10P0CW01 314 aa38.84■■■■□ 3.81
TRIO-204ENST00000502816 PLPPR3Q6T4P5 718 aa38.84■■■■□ 3.81
TRIO-204ENST00000502816 ESF1Q9H501 851 aaKnown RBP38.83■■■■□ 3.81
TRIO-204ENST00000502816 PREX1Q8TCU6 1659 aa38.83■■■■□ 3.81
TRIO-204ENST00000502816 PPP6R1Q9UPN7 881 aa38.82■■■■□ 3.8
TRIO-204ENST00000502816 PTPN23Q9H3S7 1636 aa38.75■■■■□ 3.79
TRIO-204ENST00000502816 TCOF1Q13428 1488 aaKnown RBP38.73■■■■□ 3.79
TRIO-204ENST00000502816 ZMYM3Q14202 1370 aa38.72■■■■□ 3.79
TRIO-204ENST00000502816 CLTCQ00610 1675 aaKnown RBP38.72■■■■□ 3.79
TRIO-204ENST00000502816 FGD6Q6ZV73 1430 aa38.72■■■■□ 3.79
TRIO-204ENST00000502816 GGT6Q6P531 493 aa38.71■■■■□ 3.79
TRIO-204ENST00000502816 NPATQ14207 1427 aa38.68■■■■□ 3.78
TRIO-204ENST00000502816 HSPA2P54652 639 aa38.66■■■■□ 3.78
TRIO-204ENST00000502816 FAM135AQ9P2D6 1515 aa38.66■■■■□ 3.78
TRIO-204ENST00000502816 UHRF1BP1Q6BDS2 1440 aa38.65■■■■□ 3.78
TRIO-204ENST00000502816 SHANK2Q9UPX8 1470 aa38.65■■■■□ 3.78
TRIO-204ENST00000502816 CROCC2H7BZ55 1655 aa38.64■■■■□ 3.78
TRIO-204ENST00000502816 ABCC5O15440 1437 aa38.63■■■■□ 3.78
TRIO-204ENST00000502816 KIF3BO15066 747 aa38.63■■■■□ 3.77
TRIO-204ENST00000502816 DNMT1P26358 1616 aaKnown RBP38.61■■■■□ 3.77
TRIO-204ENST00000502816 EIF2AK4Q9P2K8 1649 aaKnown RBP38.58■■■■□ 3.77
TRIO-204ENST00000502816 DAPK1P53355 1430 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms