RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 CDC42BPBQ9Y5S2 1711 aa41.75■■■■■ 4.27
CCDC149-203ENST00000502801 PREX2Q70Z35 1606 aa41.7■■■■■ 4.27
CCDC149-203ENST00000502801 ZMYM4Q5VZL5 1548 aa41.69■■■■■ 4.27
CCDC149-203ENST00000502801 POGZQ7Z3K3 1410 aa41.69■■■■■ 4.26
CCDC149-203ENST00000502801 CDC42BPAQ5VT25 1732 aa41.67■■■■■ 4.26
CCDC149-203ENST00000502801 ARHGEF40Q8TER5 1519 aa41.65■■■■■ 4.26
CCDC149-203ENST00000502801 MTUS2Q5JR59 1369 aa41.64■■■■■ 4.26
CCDC149-203ENST00000502801 MAGI2Q86UL8 1455 aa41.6■■■■■ 4.25
CCDC149-203ENST00000502801 ZFYVE16Q7Z3T8 1539 aa41.59■■■■■ 4.25
CCDC149-203ENST00000502801 YEATS2Q9ULM3 1422 aa41.58■■■■■ 4.25
CCDC149-203ENST00000502801 VPS8Q8N3P4 1428 aa41.56■■■■■ 4.24
CCDC149-203ENST00000502801 GPATCH8Q9UKJ3 1502 aaKnown RBP41.55■■■■■ 4.24
CCDC149-203ENST00000502801 ZNF518AQ6AHZ1 1483 aa41.53■■■■■ 4.24
CCDC149-203ENST00000502801 ARID4BQ4LE39 1312 aaPredicted RBP41.53■■■■■ 4.24
CCDC149-203ENST00000502801 EHBP1L1Q8N3D4 1523 aa41.53■■■■■ 4.24
CCDC149-203ENST00000502801 AFAP1Q8N556 730 aa41.52■■■■■ 4.24
CCDC149-203ENST00000502801 ABCC1P33527 1531 aa41.5■■■■■ 4.23
CCDC149-203ENST00000502801 ARHGEF12Q9NZN5 1544 aa41.48■■■■■ 4.23
CCDC149-203ENST00000502801 CCNB3Q8WWL7 1395 aa41.48■■■■■ 4.23
CCDC149-203ENST00000502801 ZNF777Q9ULD5 760 aaPredicted RBP41.47■■■■■ 4.23
CCDC149-203ENST00000502801 BCORL1Q5H9F3 1711 aa41.47■■■■■ 4.23
CCDC149-203ENST00000502801 KDM5CP41229 1560 aa41.46■■■■■ 4.23
CCDC149-203ENST00000502801 ADAMTSL3P82987 1691 aa41.46■■■■■ 4.23
CCDC149-203ENST00000502801 ITSN2Q9NZM3 1697 aa41.45■■■■■ 4.23
CCDC149-203ENST00000502801 TIAM1Q13009 1591 aa41.43■■■■■ 4.22
CCDC149-203ENST00000502801 TRAPPC8Q9Y2L5 1435 aa41.43■■■■■ 4.22
CCDC149-203ENST00000502801 SAMD9LQ8IVG5 1584 aa41.42■■■■■ 4.22
CCDC149-203ENST00000502801 SIGLEC1Q9BZZ2 1709 aa41.41■■■■■ 4.22
CCDC149-203ENST00000502801 CFDP1Q9UEE9 299 aaPredicted RBP41.41■■■■■ 4.22
CCDC149-203ENST00000502801 MYT1LQ9UL68 1186 aa41.38■■■■■ 4.21
CCDC149-203ENST00000502801 ATP10AO60312 1499 aa41.38■■■■■ 4.21
CCDC149-203ENST00000502801 HECW2Q9P2P5 1572 aa41.37■■■■■ 4.21
CCDC149-203ENST00000502801 C9orf84Q5VXU9 1444 aa41.33■■■■■ 4.21
CCDC149-203ENST00000502801 MLH3Q9UHC1 1453 aa41.33■■■■■ 4.21
CCDC149-203ENST00000502801 SUPT6HQ7KZ85 1726 aaKnown RBP41.32■■■■■ 4.21
CCDC149-203ENST00000502801 SYCP2Q9BX26 1530 aa41.32■■■■■ 4.2
CCDC149-203ENST00000502801 MADDQ8WXG6 1647 aa41.32■■■■■ 4.2
CCDC149-203ENST00000502801 HNRNPMP52272 730 aaKnown RBP eCLIP41.3■■■■■ 4.2
CCDC149-203ENST00000502801 NCOA2Q15596 1464 aa41.28■■■■■ 4.2
CCDC149-203ENST00000502801 PLEKHH2Q8IVE3 1493 aa41.28■■■■■ 4.2
CCDC149-203ENST00000502801 DIP2CQ9Y2E4 1556 aa41.27■■■■■ 4.2
CCDC149-203ENST00000502801 PTPRMP28827 1452 aa41.27■■■■■ 4.2
CCDC149-203ENST00000502801 LRRC9Q6ZRR7 1453 aa41.27■■■■■ 4.2
CCDC149-203ENST00000502801 KIAA1107Q9UPP5 1409 aa41.27■■■■■ 4.2
CCDC149-203ENST00000502801 MAP3K1Q13233 1512 aa41.25■■■■■ 4.19
CCDC149-203ENST00000502801 ABCA6Q8N139 1617 aa41.24■■■■■ 4.19
CCDC149-203ENST00000502801 KIDINS220Q9ULH0 1771 aa41.23■■■■■ 4.19
CCDC149-203ENST00000502801 MLECQ14165 292 aa41.23■■■■■ 4.19
CCDC149-203ENST00000502801 ZNF644Q9H582 1327 aaPredicted RBP41.21■■■■■ 4.19
CCDC149-203ENST00000502801 RIMS1Q86UR5 1692 aaKnown RBP41.2■■■■■ 4.19
CCDC149-203ENST00000502801 KANK4Q5T7N3 995 aaPredicted RBP41.19■■■■■ 4.18
CCDC149-203ENST00000502801 REREQ9P2R6 1566 aa41.16■■■■■ 4.18
CCDC149-203ENST00000502801 SPAG9O60271 1321 aaKnown RBP41.16■■■■■ 4.18
CCDC149-203ENST00000502801 FER1L4A9Z1Z3 1794 aa41.1■■■■■ 4.17
CCDC149-203ENST00000502801 MBD5Q9P267 1494 aa41.09■■■■■ 4.17
CCDC149-203ENST00000502801 APLP2Q06481 763 aa41.08■■■■■ 4.17
CCDC149-203ENST00000502801 ATP7AQ04656 1500 aa41.07■■■■■ 4.16
CCDC149-203ENST00000502801 INO80Q9ULG1 1556 aaPredicted RBP41.05■■■■■ 4.16
CCDC149-203ENST00000502801 AGLP35573 1532 aa41.03■■■■■ 4.16
CCDC149-203ENST00000502801 CAMSAP2Q08AD1 1489 aa41.03■■■■■ 4.16
CCDC149-203ENST00000502801 PLPPR3Q6T4P5 718 aa40.99■■■■■ 4.15
CCDC149-203ENST00000502801 CCDC141Q6ZP82 1450 aa40.92■■■■■ 4.14
CCDC149-203ENST00000502801 MYOM3Q5VTT5 1437 aa40.91■■■■■ 4.14
CCDC149-203ENST00000502801 RSPH4AQ5TD94 716 aa40.9■■■■■ 4.14
CCDC149-203ENST00000502801 A2MP01023 1474 aa40.9■■■■■ 4.14
CCDC149-203ENST00000502801 RTEL1-TNFRSF6BF6WH68 1400 aa40.89■■■■■ 4.14
CCDC149-203ENST00000502801 MIA2Q96PC5 1412 aa40.86■■■■■ 4.13
CCDC149-203ENST00000502801 ADGBQ8N7X0 1667 aa40.86■■■■■ 4.13
CCDC149-203ENST00000502801 PLXNC1O60486 1568 aa40.86■■■■■ 4.13
CCDC149-203ENST00000502801 ARHGEF5Q12774 1597 aa40.86■■■■■ 4.13
CCDC149-203ENST00000502801 CEBPAP49715 358 aaPredicted RBP40.82■■■■■ 4.13
CCDC149-203ENST00000502801 ESF1Q9H501 851 aaKnown RBP40.8■■■■■ 4.12
CCDC149-203ENST00000502801 LMTK3Q96Q04 1460 aa40.77■■■■■ 4.12
CCDC149-203ENST00000502801 TSPY4P0CV99 314 aa40.76■■■■■ 4.12
CCDC149-203ENST00000502801 TSPY10P0CW01 314 aa40.76■■■■■ 4.12
CCDC149-203ENST00000502801 DHX29Q7Z478 1369 aaKnown RBP40.72■■■■■ 4.11
CCDC149-203ENST00000502801 C3P01024 1663 aa40.72■■■■■ 4.11
CCDC149-203ENST00000502801 CNTLNQ9NXG0 1405 aa40.7■■■■■ 4.11
CCDC149-203ENST00000502801 GGT6Q6P531 493 aa40.68■■■■■ 4.1
CCDC149-203ENST00000502801 PTPN23Q9H3S7 1636 aa40.67■■■■■ 4.1
CCDC149-203ENST00000502801 MAST1Q9Y2H9 1570 aa40.65■■■■■ 4.1
CCDC149-203ENST00000502801 SETD1BQ9UPS6 1966 aaKnown RBP40.65■■■■■ 4.1
CCDC149-203ENST00000502801 FGD6Q6ZV73 1430 aa40.63■■■■■ 4.09
CCDC149-203ENST00000502801 MROH2AA6NES4 1674 aa40.61■■■■■ 4.09
CCDC149-203ENST00000502801 PREX1Q8TCU6 1659 aa40.61■■■■■ 4.09
CCDC149-203ENST00000502801 CLTCQ00610 1675 aaKnown RBP40.6■■■■■ 4.09
CCDC149-203ENST00000502801 HSPA2P54652 639 aa40.6■■■■■ 4.09
CCDC149-203ENST00000502801 KIF3BO15066 747 aa40.58■■■■■ 4.09
CCDC149-203ENST00000502801 PPP6R1Q9UPN7 881 aa40.56■■■■■ 4.08
CCDC149-203ENST00000502801 ZMYM3Q14202 1370 aa40.56■■■■■ 4.08
CCDC149-203ENST00000502801 TCOF1Q13428 1488 aaKnown RBP40.55■■■■■ 4.08
CCDC149-203ENST00000502801 ABCC5O15440 1437 aa40.52■■■■■ 4.08
CCDC149-203ENST00000502801 CROCC2H7BZ55 1655 aa40.5■■■■■ 4.07
CCDC149-203ENST00000502801 UHRF1BP1Q6BDS2 1440 aa40.49■■■■■ 4.07
CCDC149-203ENST00000502801 DNMT1P26358 1616 aaKnown RBP40.47■■■■■ 4.07
CCDC149-203ENST00000502801 DAPK1P53355 1430 aa40.46■■■■■ 4.07
CCDC149-203ENST00000502801 SHANK2Q9UPX8 1470 aa40.45■■■■■ 4.07
CCDC149-203ENST00000502801 NPATQ14207 1427 aa40.42■■■■■ 4.06
CCDC149-203ENST00000502801 DUOX2Q9NRD8 1548 aa40.37■■■■■ 4.05
CCDC149-203ENST00000502801 EIF2AK4Q9P2K8 1649 aaKnown RBP40.37■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms