RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 PTPRMP28827 1452 aa16.1■□□□□ 0.17
RNF8-208ENST00000498460 ZFYVE16Q7Z3T8 1539 aa16.1■□□□□ 0.17
RNF8-208ENST00000498460 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
RNF8-208ENST00000498460 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
RNF8-208ENST00000498460 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.17
RNF8-208ENST00000498460 CASKIN1Q8WXD9 1431 aa16.08■□□□□ 0.16
RNF8-208ENST00000498460 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
RNF8-208ENST00000498460 MAGI2Q86UL8 1455 aa16.08■□□□□ 0.16
RNF8-208ENST00000498460 ARHGAP5Q13017 1502 aa16.08■□□□□ 0.16
RNF8-208ENST00000498460 POGZQ7Z3K3 1410 aa16.07■□□□□ 0.16
RNF8-208ENST00000498460 YEATS2Q9ULM3 1422 aa16.07■□□□□ 0.16
RNF8-208ENST00000498460 SIGLEC1Q9BZZ2 1709 aa16.06■□□□□ 0.16
RNF8-208ENST00000498460 FER1L4A9Z1Z3 1794 aa16.04■□□□□ 0.16
RNF8-208ENST00000498460 PREX2Q70Z35 1606 aa16.03■□□□□ 0.16
RNF8-208ENST00000498460 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
RNF8-208ENST00000498460 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.16
RNF8-208ENST00000498460 MLECQ14165 292 aa16.02■□□□□ 0.16
RNF8-208ENST00000498460 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
RNF8-208ENST00000498460 ZNF518AQ6AHZ1 1483 aa16.02■□□□□ 0.15
RNF8-208ENST00000498460 PLPPR3Q6T4P5 718 aa16.01■□□□□ 0.15
RNF8-208ENST00000498460 ATP10AO60312 1499 aa16.01■□□□□ 0.15
RNF8-208ENST00000498460 AFAP1Q8N556 730 aa15.99■□□□□ 0.15
RNF8-208ENST00000498460 KDM5CP41229 1560 aa15.98■□□□□ 0.15
RNF8-208ENST00000498460 C9orf84Q5VXU9 1444 aa15.98■□□□□ 0.15
RNF8-208ENST00000498460 ITSN2Q9NZM3 1697 aa15.98■□□□□ 0.15
RNF8-208ENST00000498460 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
RNF8-208ENST00000498460 ABCC1P33527 1531 aa15.94■□□□□ 0.14
RNF8-208ENST00000498460 DIP2CQ9Y2E4 1556 aa15.93■□□□□ 0.14
RNF8-208ENST00000498460 LMTK3Q96Q04 1460 aa15.93■□□□□ 0.14
RNF8-208ENST00000498460 ZNF777Q9ULD5 760 aaPredicted RBP15.93■□□□□ 0.14
RNF8-208ENST00000498460 ABCA6Q8N139 1617 aa15.92■□□□□ 0.14
RNF8-208ENST00000498460 SETD1BQ9UPS6 1966 aaKnown RBP15.92■□□□□ 0.14
RNF8-208ENST00000498460 ARHGEF12Q9NZN5 1544 aa15.92■□□□□ 0.14
RNF8-208ENST00000498460 TRAPPC8Q9Y2L5 1435 aa15.92■□□□□ 0.14
RNF8-208ENST00000498460 MLH3Q9UHC1 1453 aa15.91■□□□□ 0.14
RNF8-208ENST00000498460 KIDINS220Q9ULH0 1771 aa15.9■□□□□ 0.14
RNF8-208ENST00000498460 MTUS2Q5JR59 1369 aa15.89■□□□□ 0.13
RNF8-208ENST00000498460 SAMD9LQ8IVG5 1584 aa15.89■□□□□ 0.13
RNF8-208ENST00000498460 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
RNF8-208ENST00000498460 REREQ9P2R6 1566 aa15.88■□□□□ 0.13
RNF8-208ENST00000498460 PREX1Q8TCU6 1659 aa15.88■□□□□ 0.13
RNF8-208ENST00000498460 HSPA2P54652 639 aa15.87■□□□□ 0.13
RNF8-208ENST00000498460 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
RNF8-208ENST00000498460 CEP162Q5TB80 1403 aa15.86■□□□□ 0.13
RNF8-208ENST00000498460 SYCP2Q9BX26 1530 aa15.86■□□□□ 0.13
RNF8-208ENST00000498460 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
RNF8-208ENST00000498460 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
RNF8-208ENST00000498460 HNRNPMP52272 730 aaKnown RBP eCLIP15.85■□□□□ 0.13
RNF8-208ENST00000498460 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
RNF8-208ENST00000498460 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
RNF8-208ENST00000498460 C3P01024 1663 aa15.83■□□□□ 0.13
RNF8-208ENST00000498460 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.12
RNF8-208ENST00000498460 PLEKHH2Q8IVE3 1493 aa15.83■□□□□ 0.12
RNF8-208ENST00000498460 AGLP35573 1532 aa15.83■□□□□ 0.12
RNF8-208ENST00000498460 EHBP1L1Q8N3D4 1523 aa15.82■□□□□ 0.12
RNF8-208ENST00000498460 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
RNF8-208ENST00000498460 KIAA1107Q9UPP5 1409 aa15.8■□□□□ 0.12
RNF8-208ENST00000498460 ATP7AQ04656 1500 aa15.79■□□□□ 0.12
RNF8-208ENST00000498460 INO80Q9ULG1 1556 aaPredicted RBP15.78■□□□□ 0.12
RNF8-208ENST00000498460 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.12
RNF8-208ENST00000498460 FBXO41Q8TF61 875 aa15.77■□□□□ 0.12
RNF8-208ENST00000498460 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.11
RNF8-208ENST00000498460 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
RNF8-208ENST00000498460 MROH2AA6NES4 1674 aa15.76■□□□□ 0.11
RNF8-208ENST00000498460 ZNF644Q9H582 1327 aaPredicted RBP15.75■□□□□ 0.11
RNF8-208ENST00000498460 CNTLNQ9NXG0 1405 aa15.75■□□□□ 0.11
RNF8-208ENST00000498460 STRCQ7RTU9 1775 aa15.75■□□□□ 0.11
RNF8-208ENST00000498460 CLTCQ00610 1675 aaKnown RBP15.73■□□□□ 0.11
RNF8-208ENST00000498460 A2MP01023 1474 aa15.73■□□□□ 0.11
RNF8-208ENST00000498460 PLXNC1O60486 1568 aa15.72■□□□□ 0.11
RNF8-208ENST00000498460 NCOA2Q15596 1464 aa15.71■□□□□ 0.11
RNF8-208ENST00000498460 GGT6Q6P531 493 aa15.7■□□□□ 0.1
RNF8-208ENST00000498460 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
RNF8-208ENST00000498460 MBD5Q9P267 1494 aa15.7■□□□□ 0.1
RNF8-208ENST00000498460 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
RNF8-208ENST00000498460 CAMSAP2Q08AD1 1489 aa15.68■□□□□ 0.1
RNF8-208ENST00000498460 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
RNF8-208ENST00000498460 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
RNF8-208ENST00000498460 NPATQ14207 1427 aa15.66■□□□□ 0.1
RNF8-208ENST00000498460 CCDC141Q6ZP82 1450 aa15.65■□□□□ 0.1
RNF8-208ENST00000498460 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
RNF8-208ENST00000498460 RSPH4AQ5TD94 716 aa15.65■□□□□ 0.1
RNF8-208ENST00000498460 CERKQ8TCT0 537 aa15.65■□□□□ 0.1
RNF8-208ENST00000498460 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
RNF8-208ENST00000498460 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
RNF8-208ENST00000498460 ARHGEF5Q12774 1597 aa15.62■□□□□ 0.09
RNF8-208ENST00000498460 MYO3AQ8NEV4 1616 aa15.61■□□□□ 0.09
RNF8-208ENST00000498460 KIF3BO15066 747 aa15.61■□□□□ 0.09
RNF8-208ENST00000498460 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
RNF8-208ENST00000498460 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
RNF8-208ENST00000498460 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
RNF8-208ENST00000498460 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
RNF8-208ENST00000498460 MAP3K1Q13233 1512 aa15.6■□□□□ 0.09
RNF8-208ENST00000498460 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
RNF8-208ENST00000498460 PTPRTO14522 1441 aa15.6■□□□□ 0.09
RNF8-208ENST00000498460 PTPRKQ15262 1439 aa15.59■□□□□ 0.09
RNF8-208ENST00000498460 APLP2Q06481 763 aa15.58■□□□□ 0.08
RNF8-208ENST00000498460 NCOA1Q15788 1441 aa15.58■□□□□ 0.08
RNF8-208ENST00000498460 CFAP65Q6ZU64 1925 aaKnown RBP15.57■□□□□ 0.08
RNF8-208ENST00000498460 CEP170BQ9Y4F5 1589 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms