RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
RNF8-208ENST00000498460 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
RNF8-208ENST00000498460 ABCC9O60706 1549 aa21.96■■□□□ 1.11
RNF8-208ENST00000498460 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
RNF8-208ENST00000498460 NACADO15069 1562 aa20.81■□□□□ 0.92
RNF8-208ENST00000498460 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
RNF8-208ENST00000498460 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
RNF8-208ENST00000498460 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
RNF8-208ENST00000498460 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
RNF8-208ENST00000498460 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
RNF8-208ENST00000498460 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
RNF8-208ENST00000498460 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
RNF8-208ENST00000498460 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
RNF8-208ENST00000498460 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
RNF8-208ENST00000498460 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
RNF8-208ENST00000498460 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
RNF8-208ENST00000498460 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
RNF8-208ENST00000498460 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
RNF8-208ENST00000498460 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
RNF8-208ENST00000498460 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
RNF8-208ENST00000498460 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
RNF8-208ENST00000498460 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
RNF8-208ENST00000498460 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
RNF8-208ENST00000498460 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
RNF8-208ENST00000498460 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
RNF8-208ENST00000498460 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
RNF8-208ENST00000498460 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
RNF8-208ENST00000498460 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
RNF8-208ENST00000498460 NESP48681 1621 aa18.88■□□□□ 0.61
RNF8-208ENST00000498460 CUX2O14529 1486 aa18.87■□□□□ 0.61
RNF8-208ENST00000498460 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
RNF8-208ENST00000498460 WIZO95785 1651 aa18.77■□□□□ 0.6
RNF8-208ENST00000498460 DNAJC5Q9H3Z4 198 aa18.75■□□□□ 0.59
RNF8-208ENST00000498460 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
RNF8-208ENST00000498460 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
RNF8-208ENST00000498460 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
RNF8-208ENST00000498460 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
RNF8-208ENST00000498460 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
RNF8-208ENST00000498460 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
RNF8-208ENST00000498460 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
RNF8-208ENST00000498460 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
RNF8-208ENST00000498460 WDR62O43379 1518 aa18.42■□□□□ 0.54
RNF8-208ENST00000498460 CFTRP13569 1480 aa18.41■□□□□ 0.54
RNF8-208ENST00000498460 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
RNF8-208ENST00000498460 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
RNF8-208ENST00000498460 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
RNF8-208ENST00000498460 URB2Q14146 1524 aaKnown RBP18.24■□□□□ 0.51
RNF8-208ENST00000498460 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
RNF8-208ENST00000498460 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
RNF8-208ENST00000498460 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
RNF8-208ENST00000498460 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
RNF8-208ENST00000498460 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
RNF8-208ENST00000498460 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
RNF8-208ENST00000498460 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
RNF8-208ENST00000498460 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
RNF8-208ENST00000498460 TARBP1Q13395 1621 aaKnown RBP17.93■□□□□ 0.46
RNF8-208ENST00000498460 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
RNF8-208ENST00000498460 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
RNF8-208ENST00000498460 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.453e-8■□□□□ 11.2
RNF8-208ENST00000498460 CHD1O14646 1710 aa17.86■□□□□ 0.45
RNF8-208ENST00000498460 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
RNF8-208ENST00000498460 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
RNF8-208ENST00000498460 SOGA1O94964 1423 aa17.82■□□□□ 0.44
RNF8-208ENST00000498460 RIMBP3CA6NJZ7 1639 aa17.82■□□□□ 0.44
RNF8-208ENST00000498460 RIMBP3BA6NNM3 1639 aa17.82■□□□□ 0.44
RNF8-208ENST00000498460 RIMBP3Q9UFD9 1639 aa17.82■□□□□ 0.44
RNF8-208ENST00000498460 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
RNF8-208ENST00000498460 CUX1P39880 1505 aa17.79■□□□□ 0.44
RNF8-208ENST00000498460 FBLN2P98095 1184 aa17.79■□□□□ 0.44
RNF8-208ENST00000498460 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
RNF8-208ENST00000498460 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
RNF8-208ENST00000498460 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
RNF8-208ENST00000498460 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
RNF8-208ENST00000498460 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
RNF8-208ENST00000498460 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
RNF8-208ENST00000498460 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
RNF8-208ENST00000498460 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
RNF8-208ENST00000498460 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
RNF8-208ENST00000498460 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
RNF8-208ENST00000498460 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
RNF8-208ENST00000498460 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
RNF8-208ENST00000498460 SYNJ2O15056 1496 aa17.58■□□□□ 0.41
RNF8-208ENST00000498460 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
RNF8-208ENST00000498460 BIVM-ERCC5R4GMW8 1640 aa17.57■□□□□ 0.4
RNF8-208ENST00000498460 CLASP1Q7Z460 1538 aa17.56■□□□□ 0.4
RNF8-208ENST00000498460 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
RNF8-208ENST00000498460 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
RNF8-208ENST00000498460 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
RNF8-208ENST00000498460 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
RNF8-208ENST00000498460 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
RNF8-208ENST00000498460 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
RNF8-208ENST00000498460 GRIN2AQ12879 1464 aa17.43■□□□□ 0.38
RNF8-208ENST00000498460 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
RNF8-208ENST00000498460 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
RNF8-208ENST00000498460 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
RNF8-208ENST00000498460 NUP160Q12769 1436 aa17.33■□□□□ 0.36
RNF8-208ENST00000498460 ERCC6L2Q5T890 1561 aa17.31■□□□□ 0.36
RNF8-208ENST00000498460 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
RNF8-208ENST00000498460 KIF27Q86VH2 1401 aa17.21■□□□□ 0.34
RNF8-208ENST00000498460 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 317.8 ms