RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
SSR3-209ENST00000498205 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
SSR3-209ENST00000498205 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
SSR3-209ENST00000498205 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
SSR3-209ENST00000498205 SLC24A1O60721 1099 aa12.07□□□□□ -0.48
SSR3-209ENST00000498205 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
SSR3-209ENST00000498205 KIF3CO14782 793 aa12.05□□□□□ -0.48
SSR3-209ENST00000498205 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
SSR3-209ENST00000498205 FOXK1P85037 733 aa12.04□□□□□ -0.48
SSR3-209ENST00000498205 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
SSR3-209ENST00000498205 DDX27Q96GQ7 796 aaKnown RBP12.04□□□□□ -0.48
SSR3-209ENST00000498205 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
SSR3-209ENST00000498205 C2orf72A6NCS6 295 aa12.03□□□□□ -0.48
SSR3-209ENST00000498205 MFSD10Q14728 455 aa12.03□□□□□ -0.48
SSR3-209ENST00000498205 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
SSR3-209ENST00000498205 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
SSR3-209ENST00000498205 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
SSR3-209ENST00000498205 SNPHO15079 494 aa12□□□□□ -0.49
SSR3-209ENST00000498205 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
SSR3-209ENST00000498205 DSG2Q14126 1118 aa11.95□□□□□ -0.5
SSR3-209ENST00000498205 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
SSR3-209ENST00000498205 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
SSR3-209ENST00000498205 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
SSR3-209ENST00000498205 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
SSR3-209ENST00000498205 SLC34A2O95436 690 aa11.91□□□□□ -0.5
SSR3-209ENST00000498205 E2F4Q16254 413 aa11.9□□□□□ -0.5
SSR3-209ENST00000498205 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
SSR3-209ENST00000498205 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
SSR3-209ENST00000498205 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
SSR3-209ENST00000498205 TBC1D12O60347 775 aa11.87□□□□□ -0.51
SSR3-209ENST00000498205 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
SSR3-209ENST00000498205 PTCD2Q8WV60 388 aaKnown RBP11.84□□□□□ -0.51
SSR3-209ENST00000498205 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
SSR3-209ENST00000498205 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
SSR3-209ENST00000498205 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
SSR3-209ENST00000498205 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
SSR3-209ENST00000498205 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
SSR3-209ENST00000498205 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
SSR3-209ENST00000498205 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
SSR3-209ENST00000498205 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
SSR3-209ENST00000498205 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
SSR3-209ENST00000498205 SPDYE16A6NNV3 312 aaPredicted RBP11.74□□□□□ -0.53
SSR3-209ENST00000498205 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
SSR3-209ENST00000498205 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
SSR3-209ENST00000498205 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
SSR3-209ENST00000498205 DPYSL4O14531 572 aa11.69□□□□□ -0.54
SSR3-209ENST00000498205 PDIA6Q15084 440 aa11.69□□□□□ -0.54
SSR3-209ENST00000498205 ST18O60284 1047 aa11.68□□□□□ -0.54
SSR3-209ENST00000498205 ARSIQ5FYB1 569 aa11.68□□□□□ -0.54
SSR3-209ENST00000498205 EVI5O60447 810 aa11.67□□□□□ -0.54
SSR3-209ENST00000498205 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
SSR3-209ENST00000498205 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
SSR3-209ENST00000498205 ANO8Q9HCE9 1232 aaPredicted RBP11.66□□□□□ -0.54
SSR3-209ENST00000498205 NUDT7P0C024 238 aa11.63□□□□□ -0.55
SSR3-209ENST00000498205 PTGER2P43116 358 aa11.63□□□□□ -0.55
SSR3-209ENST00000498205 NBR1Q14596 966 aa11.63□□□□□ -0.55
SSR3-209ENST00000498205 KDM4FA0A1W2PPD8 638 aa11.62□□□□□ -0.55
SSR3-209ENST00000498205 EMP3P54852 163 aa11.59□□□□□ -0.55
SSR3-209ENST00000498205 SMYD5Q6GMV2 418 aa11.59□□□□□ -0.55
SSR3-209ENST00000498205 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
SSR3-209ENST00000498205 BCANQ96GW7 911 aa11.58□□□□□ -0.56
SSR3-209ENST00000498205 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.565e-16■■■□□ 18.7
SSR3-209ENST00000498205 JPH4Q96JJ6 628 aa11.57□□□□□ -0.56
SSR3-209ENST00000498205 PHF14O94880 888 aa11.56□□□□□ -0.56
SSR3-209ENST00000498205 ERBB3P21860 1342 aa11.56□□□□□ -0.56
SSR3-209ENST00000498205 EPAS1Q99814 870 aa11.55□□□□□ -0.56
SSR3-209ENST00000498205 LHX6Q9UPM6 363 aa11.55□□□□□ -0.56
SSR3-209ENST00000498205 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
SSR3-209ENST00000498205 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
SSR3-209ENST00000498205 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
SSR3-209ENST00000498205 TESPA1A2RU30 521 aaPredicted RBP11.51□□□□□ -0.57
SSR3-209ENST00000498205 SEMA3EO15041 775 aa11.51□□□□□ -0.57
SSR3-209ENST00000498205 FOSBP53539 338 aa11.51□□□□□ -0.57
SSR3-209ENST00000498205 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
SSR3-209ENST00000498205 TYW1BQ6NUM6 668 aa11.5□□□□□ -0.57
SSR3-209ENST00000498205 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
SSR3-209ENST00000498205 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
SSR3-209ENST00000498205 FAM205CA6NFA0 338 aa11.48□□□□□ -0.57
SSR3-209ENST00000498205 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
SSR3-209ENST00000498205 DDX12PQ92771 950 aa11.48□□□□□ -0.57
SSR3-209ENST00000498205 GRXCR2A6NFK2 248 aa11.47□□□□□ -0.57
SSR3-209ENST00000498205 KCNH8Q96L42 1107 aa11.47□□□□□ -0.57
SSR3-209ENST00000498205 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
SSR3-209ENST00000498205 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
SSR3-209ENST00000498205 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
SSR3-209ENST00000498205 PBX2P40425 430 aa11.44□□□□□ -0.58
SSR3-209ENST00000498205 MLLT3P42568 568 aaPredicted RBP11.43□□□□□ -0.58
SSR3-209ENST00000498205 EN1Q05925 392 aaPredicted RBP11.43□□□□□ -0.58
SSR3-209ENST00000498205 BCL2L12Q9HB09 334 aa11.43□□□□□ -0.58
SSR3-209ENST00000498205 OSBPP22059 807 aa11.42□□□□□ -0.58
SSR3-209ENST00000498205 POTEMA6NI47 508 aa11.41□□□□□ -0.58
SSR3-209ENST00000498205 POTEGQ6S5H5 508 aa11.41□□□□□ -0.58
SSR3-209ENST00000498205 PTPREP23469 700 aa11.4□□□□□ -0.58
SSR3-209ENST00000498205 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
SSR3-209ENST00000498205 MAP3K7O43318 606 aa11.38□□□□□ -0.59
SSR3-209ENST00000498205 PCDH10Q9P2E7 1040 aa11.38□□□□□ -0.59
SSR3-209ENST00000498205 ARHGAP33O14559 1287 aa11.37□□□□□ -0.59
SSR3-209ENST00000498205 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
SSR3-209ENST00000498205 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
SSR3-209ENST00000498205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms