RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 SYNJ2O15056 1496 aa27.49■■□□□ 1.99
NKX2-1-202ENST00000498187 DNMT1P26358 1616 aaKnown RBP27.49■■□□□ 1.99
NKX2-1-202ENST00000498187 NUP153P49790 1475 aaKnown RBP27.49■■□□□ 1.99
NKX2-1-202ENST00000498187 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
NKX2-1-202ENST00000498187 RAPGEF6Q8TEU7 1601 aa27.48■■□□□ 1.99
NKX2-1-202ENST00000498187 WASHC2AQ641Q2 1341 aa27.48■■□□□ 1.99
NKX2-1-202ENST00000498187 FOXD1Q16676 465 aa27.47■■□□□ 1.99
NKX2-1-202ENST00000498187 ABCC5O15440 1437 aa27.45■■□□□ 1.99
NKX2-1-202ENST00000498187 EIF4G2P78344 907 aaKnown RBP eCLIP27.45■■□□□ 1.98
NKX2-1-202ENST00000498187 L3MBTL2Q969R5 705 aa27.45■■□□□ 1.98
NKX2-1-202ENST00000498187 ZNF644Q9H582 1327 aaPredicted RBP27.42■■□□□ 1.98
NKX2-1-202ENST00000498187 RBM19Q9Y4C8 960 aaKnown RBP27.4■■□□□ 1.98
NKX2-1-202ENST00000498187 ANKRD30BQ9BXX2 1392 aa27.39■■□□□ 1.98
NKX2-1-202ENST00000498187 CDK11AQ9UQ88 783 aaPredicted RBP27.39■■□□□ 1.97
NKX2-1-202ENST00000498187 CEP170Q5SW79 1584 aa27.39■■□□□ 1.97
NKX2-1-202ENST00000498187 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
NKX2-1-202ENST00000498187 NUP160Q12769 1436 aa27.37■■□□□ 1.97
NKX2-1-202ENST00000498187 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
NKX2-1-202ENST00000498187 CNTLNQ9NXG0 1405 aa27.34■■□□□ 1.97
NKX2-1-202ENST00000498187 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.97
NKX2-1-202ENST00000498187 HNRNPUQ00839 825 aaKnown RBP eCLIP27.32■■□□□ 1.96
NKX2-1-202ENST00000498187 PRG4Q92954 1404 aaPredicted RBP27.32■■□□□ 1.96
NKX2-1-202ENST00000498187 TROQ12816 1431 aaPredicted RBP27.31■■□□□ 1.96
NKX2-1-202ENST00000498187 SLC4A1APQ9BWU0 796 aaKnown RBP27.31■■□□□ 1.96
NKX2-1-202ENST00000498187 NCOA1Q15788 1441 aa27.31■■□□□ 1.96
NKX2-1-202ENST00000498187 CAMSAP2Q08AD1 1489 aa27.29■■□□□ 1.96
NKX2-1-202ENST00000498187 NBPF8Q3BBV2 869 aa27.29■■□□□ 1.96
NKX2-1-202ENST00000498187 ITSN2Q9NZM3 1697 aa27.29■■□□□ 1.96
NKX2-1-202ENST00000498187 C11orf95C9JLR9 678 aaPredicted RBP27.28■■□□□ 1.96
NKX2-1-202ENST00000498187 CARMIL2Q6F5E8 1435 aa27.28■■□□□ 1.96
NKX2-1-202ENST00000498187 CCDC7Q96M83 1385 aa27.28■■□□□ 1.96
NKX2-1-202ENST00000498187 PLB1Q6P1J6 1458 aa27.26■■□□□ 1.95
NKX2-1-202ENST00000498187 ADGBQ8N7X0 1667 aa27.25■■□□□ 1.95
NKX2-1-202ENST00000498187 CFDP1Q9UEE9 299 aaPredicted RBP27.25■■□□□ 1.95
NKX2-1-202ENST00000498187 PZPP20742 1482 aa27.24■■□□□ 1.95
NKX2-1-202ENST00000498187 FBLN2P98095 1184 aa27.23■■□□□ 1.95
NKX2-1-202ENST00000498187 KIF14Q15058 1648 aa27.23■■□□□ 1.95
NKX2-1-202ENST00000498187 ADCY10Q96PN6 1610 aa27.23■■□□□ 1.95
NKX2-1-202ENST00000498187 GPATCH8Q9UKJ3 1502 aaKnown RBP27.23■■□□□ 1.95
NKX2-1-202ENST00000498187 CROCC2H7BZ55 1655 aa27.2■■□□□ 1.94
NKX2-1-202ENST00000498187 POLR1AO95602 1720 aaPredicted RBP27.19■■□□□ 1.94
NKX2-1-202ENST00000498187 JPH4Q96JJ6 628 aa27.19■■□□□ 1.94
NKX2-1-202ENST00000498187 SPATA31E1Q6ZUB1 1445 aa27.19■■□□□ 1.94
NKX2-1-202ENST00000498187 CCDC184Q52MB2 194 aa27.18■■□□□ 1.94
NKX2-1-202ENST00000498187 PRKRIP1Q9H875 184 aaPredicted RBP27.17■■□□□ 1.94
NKX2-1-202ENST00000498187 ZNF777Q9ULD5 760 aaPredicted RBP27.17■■□□□ 1.94
NKX2-1-202ENST00000498187 ADGRL2O95490 1459 aa27.16■■□□□ 1.94
NKX2-1-202ENST00000498187 ERICH6BQ5W0A0 696 aa27.16■■□□□ 1.94
NKX2-1-202ENST00000498187 KIF7Q2M1P5 1343 aa27.13■■□□□ 1.93
NKX2-1-202ENST00000498187 KIAA1107Q9UPP5 1409 aa27.11■■□□□ 1.93
NKX2-1-202ENST00000498187 MBD5Q9P267 1494 aa27.1■■□□□ 1.93
NKX2-1-202ENST00000498187 ABCA8O94911 1581 aa27.09■■□□□ 1.93
NKX2-1-202ENST00000498187 ANKRD30AQ9BXX3 1397 aa27.09■■□□□ 1.93
NKX2-1-202ENST00000498187 MRS2Q9HD23 443 aa27.07■■□□□ 1.92
NKX2-1-202ENST00000498187 FANCIQ9NVI1 1328 aa27.06■■□□□ 1.92
NKX2-1-202ENST00000498187 CDC42BPAQ5VT25 1732 aa27.06■■□□□ 1.92
NKX2-1-202ENST00000498187 FAM9BQ8IZU0 186 aa27.06■■□□□ 1.92
NKX2-1-202ENST00000498187 PKD2Q13563 968 aa27.05■■□□□ 1.92
NKX2-1-202ENST00000498187 IRX6P78412 446 aaPredicted RBP27.04■■□□□ 1.92
NKX2-1-202ENST00000498187 ANKRD50Q9ULJ7 1429 aa27.04■■□□□ 1.92
NKX2-1-202ENST00000498187 PLEKHD1A6NEE1 506 aa27.01■■□□□ 1.91
NKX2-1-202ENST00000498187 ABCC10Q5T3U5 1492 aa27■■□□□ 1.91
NKX2-1-202ENST00000498187 PPP4R2Q9NY27 417 aa27■■□□□ 1.91
NKX2-1-202ENST00000498187 USP47Q96K76 1375 aa26.99■■□□□ 1.91
NKX2-1-202ENST00000498187 ZNF326Q5BKZ1 582 aaKnown RBP26.99■■□□□ 1.91
NKX2-1-202ENST00000498187 SHANK2Q9UPX8 1470 aa26.98■■□□□ 1.91
NKX2-1-202ENST00000498187 MSH5O43196 834 aa26.98■■□□□ 1.91
NKX2-1-202ENST00000498187 BCORL1Q5H9F3 1711 aa26.98■■□□□ 1.91
NKX2-1-202ENST00000498187 ATP10BO94823 1461 aa26.98■■□□□ 1.91
NKX2-1-202ENST00000498187 C9orf84Q5VXU9 1444 aa26.97■■□□□ 1.91
NKX2-1-202ENST00000498187 ZBED9Q6R2W3 1325 aa26.96■■□□□ 1.91
NKX2-1-202ENST00000498187 CHD1O14646 1710 aa26.96■■□□□ 1.91
NKX2-1-202ENST00000498187 KDM5CP41229 1560 aa26.94■■□□□ 1.9
NKX2-1-202ENST00000498187 NUP155O75694 1391 aa26.94■■□□□ 1.9
NKX2-1-202ENST00000498187 DHX29Q7Z478 1369 aaKnown RBP26.92■■□□□ 1.9
NKX2-1-202ENST00000498187 BCL11AQ9H165 835 aa26.91■■□□□ 1.9
NKX2-1-202ENST00000498187 UHRF1BP1Q6BDS2 1440 aa26.89■■□□□ 1.89
NKX2-1-202ENST00000498187 POLR3GLQ9BT43 218 aa26.89■■□□□ 1.89
NKX2-1-202ENST00000498187 KDM5DQ9BY66 1539 aa26.89■■□□□ 1.89
NKX2-1-202ENST00000498187 SHROOM2Q13796 1616 aa26.88■■□□□ 1.89
NKX2-1-202ENST00000498187 PTPRGP23470 1445 aa26.87■■□□□ 1.89
NKX2-1-202ENST00000498187 RALGAPBQ86X10 1494 aa26.87■■□□□ 1.89
NKX2-1-202ENST00000498187 TSPY4P0CV99 314 aa26.87■■□□□ 1.89
NKX2-1-202ENST00000498187 TSPY10P0CW01 314 aa26.87■■□□□ 1.89
NKX2-1-202ENST00000498187 ERICH6Q7L0X2 663 aa26.87■■□□□ 1.89
NKX2-1-202ENST00000498187 ARID4BQ4LE39 1312 aaPredicted RBP26.85■■□□□ 1.89
NKX2-1-202ENST00000498187 ARHGEF12Q9NZN5 1544 aa26.85■■□□□ 1.89
NKX2-1-202ENST00000498187 ARHGEF5Q12774 1597 aa26.84■■□□□ 1.89
NKX2-1-202ENST00000498187 KIF15Q9NS87 1388 aa26.83■■□□□ 1.89
NKX2-1-202ENST00000498187 HNRNPMP52272 730 aaKnown RBP eCLIP26.83■■□□□ 1.89
NKX2-1-202ENST00000498187 CNGB1Q14028 1251 aaPredicted RBP26.82■■□□□ 1.88
NKX2-1-202ENST00000498187 CARD11Q9BXL7 1154 aa26.79■■□□□ 1.88
NKX2-1-202ENST00000498187 SAMD9LQ8IVG5 1584 aa26.77■■□□□ 1.88
NKX2-1-202ENST00000498187 ROCK2O75116 1388 aaKnown RBP26.77■■□□□ 1.88
NKX2-1-202ENST00000498187 CDC42BPBQ9Y5S2 1711 aa26.76■■□□□ 1.88
NKX2-1-202ENST00000498187 KDM2AQ9Y2K7 1162 aa26.76■■□□□ 1.87
NKX2-1-202ENST00000498187 PREX2Q70Z35 1606 aa26.75■■□□□ 1.87
NKX2-1-202ENST00000498187 CCDC141Q6ZP82 1450 aa26.75■■□□□ 1.87
NKX2-1-202ENST00000498187 B4GALNT3Q6L9W6 998 aa26.73■■□□□ 1.87
NKX2-1-202ENST00000498187 DCAF11Q8TEB1 546 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms