RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.2
USP11-212ENST00000497179 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
USP11-212ENST00000497179 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
USP11-212ENST00000497179 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
USP11-212ENST00000497179 KDM6BO15054 1643 aa22.53■■□□□ 1.2
USP11-212ENST00000497179 AKNAQ7Z591 1439 aa22.52■■□□□ 1.2
USP11-212ENST00000497179 EFCAB2Q5VUJ9 269 aa22.52■■□□□ 1.2
USP11-212ENST00000497179 COL17A1Q9UMD9 1497 aaPredicted RBP22.48■■□□□ 1.19
USP11-212ENST00000497179 SAMD9LQ8IVG5 1584 aa22.48■■□□□ 1.19
USP11-212ENST00000497179 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
USP11-212ENST00000497179 ADGRL1O94910 1474 aa22.47■■□□□ 1.19
USP11-212ENST00000497179 ABCC1P33527 1531 aa22.47■■□□□ 1.19
USP11-212ENST00000497179 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
USP11-212ENST00000497179 MIA2Q96PC5 1412 aa22.43■■□□□ 1.18
USP11-212ENST00000497179 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
USP11-212ENST00000497179 DENND4BO75064 1496 aaPredicted RBP22.42■■□□□ 1.18
USP11-212ENST00000497179 PLEKHH2Q8IVE3 1493 aa22.42■■□□□ 1.18
USP11-212ENST00000497179 SCAPERQ9BY12 1400 aa22.41■■□□□ 1.18
USP11-212ENST00000497179 RICTORQ6R327 1708 aa22.41■■□□□ 1.18
USP11-212ENST00000497179 POGZQ7Z3K3 1410 aa22.4■■□□□ 1.18
USP11-212ENST00000497179 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
USP11-212ENST00000497179 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
USP11-212ENST00000497179 KIAA1107Q9UPP5 1409 aa22.4■■□□□ 1.18
USP11-212ENST00000497179 PPARGC1BQ86YN6 1023 aaKnown RBP22.39■■□□□ 1.17
USP11-212ENST00000497179 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
USP11-212ENST00000497179 SYCP2Q9BX26 1530 aa22.39■■□□□ 1.17
USP11-212ENST00000497179 FGD6Q6ZV73 1430 aa22.39■■□□□ 1.17
USP11-212ENST00000497179 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
USP11-212ENST00000497179 PTPN23Q9H3S7 1636 aa22.35■■□□□ 1.17
USP11-212ENST00000497179 ZNF518AQ6AHZ1 1483 aa22.35■■□□□ 1.17
USP11-212ENST00000497179 ZNF644Q9H582 1327 aaPredicted RBP22.35■■□□□ 1.17
USP11-212ENST00000497179 KDM5CP41229 1560 aa22.34■■□□□ 1.17
USP11-212ENST00000497179 RAPGEF3O95398 923 aa22.34■■□□□ 1.17
USP11-212ENST00000497179 TCOF1Q13428 1488 aaKnown RBP22.34■■□□□ 1.17
USP11-212ENST00000497179 MBD5Q9P267 1494 aa22.33■■□□□ 1.16
USP11-212ENST00000497179 TRAPPC8Q9Y2L5 1435 aa22.32■■□□□ 1.16
USP11-212ENST00000497179 ARHGEF5Q12774 1597 aa22.31■■□□□ 1.16
USP11-212ENST00000497179 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.16
USP11-212ENST00000497179 CCDC141Q6ZP82 1450 aa22.28■■□□□ 1.16
USP11-212ENST00000497179 HECW2Q9P2P5 1572 aa22.27■■□□□ 1.16
USP11-212ENST00000497179 MAGI2Q86UL8 1455 aa22.27■■□□□ 1.16
USP11-212ENST00000497179 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
USP11-212ENST00000497179 ARHGEF40Q8TER5 1519 aa22.26■■□□□ 1.15
USP11-212ENST00000497179 MLH3Q9UHC1 1453 aa22.25■■□□□ 1.15
USP11-212ENST00000497179 ZFYVE16Q7Z3T8 1539 aa22.24■■□□□ 1.15
USP11-212ENST00000497179 INO80Q9ULG1 1556 aaPredicted RBP22.24■■□□□ 1.15
USP11-212ENST00000497179 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
USP11-212ENST00000497179 DNMT1P26358 1616 aaKnown RBP22.23■■□□□ 1.15
USP11-212ENST00000497179 RSPH4AQ5TD94 716 aa22.22■■□□□ 1.15
USP11-212ENST00000497179 CROCC2H7BZ55 1655 aa22.2■■□□□ 1.15
USP11-212ENST00000497179 KIDINS220Q9ULH0 1771 aa22.2■■□□□ 1.14
USP11-212ENST00000497179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.14
USP11-212ENST00000497179 YEATS2Q9ULM3 1422 aa22.2■■□□□ 1.14
USP11-212ENST00000497179 ATP7AQ04656 1500 aa22.2■■□□□ 1.14
USP11-212ENST00000497179 MAST1Q9Y2H9 1570 aa22.2■■□□□ 1.14
USP11-212ENST00000497179 SPAG9O60271 1321 aaKnown RBP22.19■■□□□ 1.14
USP11-212ENST00000497179 ABCA6Q8N139 1617 aa22.18■■□□□ 1.14
USP11-212ENST00000497179 DIP2CQ9Y2E4 1556 aa22.18■■□□□ 1.14
USP11-212ENST00000497179 SHANK2Q9UPX8 1470 aa22.18■■□□□ 1.14
USP11-212ENST00000497179 ABCC5O15440 1437 aa22.18■■□□□ 1.14
USP11-212ENST00000497179 DAPK1P53355 1430 aa22.18■■□□□ 1.14
USP11-212ENST00000497179 RTEL1-TNFRSF6BF6WH68 1400 aa22.17■■□□□ 1.14
USP11-212ENST00000497179 FAM50AQ14320 339 aaKnown RBP22.17■■□□□ 1.14
USP11-212ENST00000497179 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.14
USP11-212ENST00000497179 REREQ9P2R6 1566 aa22.12■■□□□ 1.13
USP11-212ENST00000497179 ATP10AO60312 1499 aa22.12■■□□□ 1.13
USP11-212ENST00000497179 TSPY4P0CV99 314 aa22.12■■□□□ 1.13
USP11-212ENST00000497179 TSPY10P0CW01 314 aa22.12■■□□□ 1.13
USP11-212ENST00000497179 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
USP11-212ENST00000497179 PLXNC1O60486 1568 aa22.11■■□□□ 1.13
USP11-212ENST00000497179 ADGBQ8N7X0 1667 aa22.09■■□□□ 1.13
USP11-212ENST00000497179 SIGLEC1Q9BZZ2 1709 aa22.07■■□□□ 1.12
USP11-212ENST00000497179 ADGRL2O95490 1459 aa22.07■■□□□ 1.12
USP11-212ENST00000497179 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
USP11-212ENST00000497179 A2MP01023 1474 aa22.04■■□□□ 1.12
USP11-212ENST00000497179 AGLP35573 1532 aa22.03■■□□□ 1.12
USP11-212ENST00000497179 ANKRD30AQ9BXX3 1397 aa22■■□□□ 1.11
USP11-212ENST00000497179 NCOA1Q15788 1441 aa22■■□□□ 1.11
USP11-212ENST00000497179 DUOX2Q9NRD8 1548 aa22■■□□□ 1.11
USP11-212ENST00000497179 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
USP11-212ENST00000497179 DHX29Q7Z478 1369 aaKnown RBP21.99■■□□□ 1.11
USP11-212ENST00000497179 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
USP11-212ENST00000497179 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
USP11-212ENST00000497179 ITGAEP38570 1179 aa21.97■■□□□ 1.11
USP11-212ENST00000497179 BCORL1Q5H9F3 1711 aa21.96■■□□□ 1.11
USP11-212ENST00000497179 EIF2AK4Q9P2K8 1649 aaKnown RBP21.95■■□□□ 1.1
USP11-212ENST00000497179 ARID4BQ4LE39 1312 aaPredicted RBP21.94■■□□□ 1.1
USP11-212ENST00000497179 ERBINQ96RT1 1412 aa21.94■■□□□ 1.1
USP11-212ENST00000497179 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
USP11-212ENST00000497179 ADAMTSL3P82987 1691 aa21.91■■□□□ 1.1
USP11-212ENST00000497179 RNF17Q9BXT8 1623 aaKnown RBP21.89■■□□□ 1.09
USP11-212ENST00000497179 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
USP11-212ENST00000497179 ANKRD50Q9ULJ7 1429 aa21.87■■□□□ 1.09
USP11-212ENST00000497179 MADDQ8WXG6 1647 aa21.86■■□□□ 1.09
USP11-212ENST00000497179 HFM1A2PYH4 1435 aa21.85■■□□□ 1.09
USP11-212ENST00000497179 DEPDC5O75140 1603 aa21.84■■□□□ 1.09
USP11-212ENST00000497179 MROH1Q8NDA8 1641 aa21.84■■□□□ 1.09
USP11-212ENST00000497179 NAIPQ13075 1403 aa21.84■■□□□ 1.09
USP11-212ENST00000497179 KIF3BO15066 747 aa21.84■■□□□ 1.09
USP11-212ENST00000497179 MLECQ14165 292 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms