RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 PREX2Q70Z35 1606 aa25.33■■□□□ 1.65
LMNA-216ENST00000496738 CDC42BPBQ9Y5S2 1711 aa25.31■■□□□ 1.64
LMNA-216ENST00000496738 MYO5CQ9NQX4 1742 aa25.3■■□□□ 1.64
LMNA-216ENST00000496738 ARHGAP5Q13017 1502 aa25.28■■□□□ 1.64
LMNA-216ENST00000496738 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
LMNA-216ENST00000496738 DAPK1P53355 1430 aa25.25■■□□□ 1.63
LMNA-216ENST00000496738 DNMT1P26358 1616 aaKnown RBP25.25■■□□□ 1.63
LMNA-216ENST00000496738 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
LMNA-216ENST00000496738 SAMD9LQ8IVG5 1584 aa25.24■■□□□ 1.63
LMNA-216ENST00000496738 ABCC5O15440 1437 aa25.22■■□□□ 1.63
LMNA-216ENST00000496738 MYT1Q01538 1121 aa25.22■■□□□ 1.63
LMNA-216ENST00000496738 PLCH2O75038 1416 aa25.21■■□□□ 1.63
LMNA-216ENST00000496738 ABCA9Q8IUA7 1624 aa25.21■■□□□ 1.63
LMNA-216ENST00000496738 SETD5Q9C0A6 1442 aa25.21■■□□□ 1.63
LMNA-216ENST00000496738 RAB3GAP2Q9H2M9 1393 aa25.21■■□□□ 1.63
LMNA-216ENST00000496738 HRCP23327 699 aa25.19■■□□□ 1.62
LMNA-216ENST00000496738 HNRNPMP52272 730 aaKnown RBP eCLIP25.18■■□□□ 1.62
LMNA-216ENST00000496738 RRP7BPQ9NSQ0 103 aa25.18■■□□□ 1.62
LMNA-216ENST00000496738 MAPKBP1O60336 1514 aa25.17■■□□□ 1.62
LMNA-216ENST00000496738 SYCP2Q9BX26 1530 aa25.15■■□□□ 1.62
LMNA-216ENST00000496738 CROCC2H7BZ55 1655 aa25.14■■□□□ 1.62
LMNA-216ENST00000496738 HFM1A2PYH4 1435 aa25.14■■□□□ 1.62
LMNA-216ENST00000496738 EFCAB2Q5VUJ9 269 aa25.13■■□□□ 1.61
LMNA-216ENST00000496738 NAIPQ13075 1403 aa25.12■■□□□ 1.61
LMNA-216ENST00000496738 MBD5Q9P267 1494 aa25.11■■□□□ 1.61
LMNA-216ENST00000496738 AKNAQ7Z591 1439 aa25.1■■□□□ 1.61
LMNA-216ENST00000496738 ARHGEF5Q12774 1597 aa25.09■■□□□ 1.61
LMNA-216ENST00000496738 FANCAO15360 1455 aa25.08■■□□□ 1.61
LMNA-216ENST00000496738 ARAP3Q8WWN8 1544 aa25.08■■□□□ 1.61
LMNA-216ENST00000496738 ARHGEF12Q9NZN5 1544 aa25.08■■□□□ 1.61
LMNA-216ENST00000496738 GCC2Q8IWJ2 1684 aa25.07■■□□□ 1.6
LMNA-216ENST00000496738 CCDC141Q6ZP82 1450 aa25.06■■□□□ 1.6
LMNA-216ENST00000496738 CD109Q6YHK3 1445 aa25.06■■□□□ 1.6
LMNA-216ENST00000496738 ADGBQ8N7X0 1667 aa25.06■■□□□ 1.6
LMNA-216ENST00000496738 ABCC1P33527 1531 aa25.06■■□□□ 1.6
LMNA-216ENST00000496738 PLEKHH2Q8IVE3 1493 aa25.06■■□□□ 1.6
LMNA-216ENST00000496738 C9orf84Q5VXU9 1444 aa25.05■■□□□ 1.6
LMNA-216ENST00000496738 ROCK1Q13464 1354 aa25.04■■□□□ 1.6
LMNA-216ENST00000496738 DHX57Q6P158 1386 aaKnown RBP25.04■■□□□ 1.6
LMNA-216ENST00000496738 KDM6BO15054 1643 aa25.04■■□□□ 1.6
LMNA-216ENST00000496738 TSPY4P0CV99 314 aa25.03■■□□□ 1.6
LMNA-216ENST00000496738 TSPY10P0CW01 314 aa25.03■■□□□ 1.6
LMNA-216ENST00000496738 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
LMNA-216ENST00000496738 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
LMNA-216ENST00000496738 NCOA1Q15788 1441 aa25■■□□□ 1.59
LMNA-216ENST00000496738 ADGRL2O95490 1459 aa25■■□□□ 1.59
LMNA-216ENST00000496738 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
LMNA-216ENST00000496738 DIP2BQ9P265 1576 aa24.99■■□□□ 1.59
LMNA-216ENST00000496738 ANKRD30AQ9BXX3 1397 aa24.99■■□□□ 1.59
LMNA-216ENST00000496738 FAM69CQ0P6D2 419 aa24.99■■□□□ 1.59
LMNA-216ENST00000496738 ADGRL1O94910 1474 aa24.98■■□□□ 1.59
LMNA-216ENST00000496738 RSPH4AQ5TD94 716 aa24.97■■□□□ 1.59
LMNA-216ENST00000496738 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
LMNA-216ENST00000496738 GLI2P10070 1586 aa24.95■■□□□ 1.59
LMNA-216ENST00000496738 SCAPERQ9BY12 1400 aa24.94■■□□□ 1.58
LMNA-216ENST00000496738 AFAP1Q8N556 730 aa24.94■■□□□ 1.58
LMNA-216ENST00000496738 ZEB1P37275 1124 aaPredicted RBP24.93■■□□□ 1.58
LMNA-216ENST00000496738 CFAP74Q9C0B2 1584 aa24.92■■□□□ 1.58
LMNA-216ENST00000496738 MAST1Q9Y2H9 1570 aa24.91■■□□□ 1.58
LMNA-216ENST00000496738 KIF15Q9NS87 1388 aa24.91■■□□□ 1.58
LMNA-216ENST00000496738 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
LMNA-216ENST00000496738 TSPOAP1O95153 1857 aa24.88■■□□□ 1.57
LMNA-216ENST00000496738 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
LMNA-216ENST00000496738 ANKRD50Q9ULJ7 1429 aa24.87■■□□□ 1.57
LMNA-216ENST00000496738 SPAG9O60271 1321 aaKnown RBP24.86■■□□□ 1.57
LMNA-216ENST00000496738 KIF13AQ9H1H9 1805 aa24.85■■□□□ 1.57
LMNA-216ENST00000496738 NEO1Q92859 1461 aa24.84■■□□□ 1.57
LMNA-216ENST00000496738 MYT1LQ9UL68 1186 aa24.83■■□□□ 1.57
LMNA-216ENST00000496738 PLXNC1O60486 1568 aa24.83■■□□□ 1.57
LMNA-216ENST00000496738 ZFYVE16Q7Z3T8 1539 aa24.83■■□□□ 1.57
LMNA-216ENST00000496738 PPRC1Q5VV67 1664 aaKnown RBP24.8■■□□□ 1.56
LMNA-216ENST00000496738 POGZQ7Z3K3 1410 aa24.79■■□□□ 1.56
LMNA-216ENST00000496738 INO80Q9ULG1 1556 aaPredicted RBP24.79■■□□□ 1.56
LMNA-216ENST00000496738 ATP7AQ04656 1500 aa24.79■■□□□ 1.56
LMNA-216ENST00000496738 ZNF518AQ6AHZ1 1483 aa24.79■■□□□ 1.56
LMNA-216ENST00000496738 CLSPNQ9HAW4 1339 aa24.77■■□□□ 1.56
LMNA-216ENST00000496738 RAPGEF3O95398 923 aa24.77■■□□□ 1.56
LMNA-216ENST00000496738 RTEL1-TNFRSF6BF6WH68 1400 aa24.76■■□□□ 1.55
LMNA-216ENST00000496738 DENND4BO75064 1496 aaPredicted RBP24.75■■□□□ 1.55
LMNA-216ENST00000496738 DUOX2Q9NRD8 1548 aa24.74■■□□□ 1.55
LMNA-216ENST00000496738 MPHOSPH9Q99550 1183 aa24.73■■□□□ 1.55
LMNA-216ENST00000496738 KDM5CP41229 1560 aa24.72■■□□□ 1.55
LMNA-216ENST00000496738 TEX14Q8IWB6 1497 aa24.71■■□□□ 1.55
LMNA-216ENST00000496738 KIDINS220Q9ULH0 1771 aa24.71■■□□□ 1.55
LMNA-216ENST00000496738 FOXD1Q16676 465 aa24.7■■□□□ 1.54
LMNA-216ENST00000496738 SIN3AQ96ST3 1273 aa24.7■■□□□ 1.54
LMNA-216ENST00000496738 PZPP20742 1482 aa24.69■■□□□ 1.54
LMNA-216ENST00000496738 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
LMNA-216ENST00000496738 HECW2Q9P2P5 1572 aa24.69■■□□□ 1.54
LMNA-216ENST00000496738 RICTORQ6R327 1708 aa24.68■■□□□ 1.54
LMNA-216ENST00000496738 NUP155O75694 1391 aa24.68■■□□□ 1.54
LMNA-216ENST00000496738 ERBINQ96RT1 1412 aa24.67■■□□□ 1.54
LMNA-216ENST00000496738 NEUROD1Q13562 356 aa24.67■■□□□ 1.54
LMNA-216ENST00000496738 ACIN1Q9UKV3 1341 aaKnown RBP24.66■■□□□ 1.54
LMNA-216ENST00000496738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.66■■□□□ 1.542e-8■■■□□ 16.9
LMNA-216ENST00000496738 FRMPD1Q5SYB0 1578 aa24.66■■□□□ 1.54
LMNA-216ENST00000496738 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.54
LMNA-216ENST00000496738 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.53
LMNA-216ENST00000496738 UNC13BO14795 1591 aa24.62■■□□□ 1.53
LMNA-216ENST00000496738 ABCA6Q8N139 1617 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms