RNA–Protein interactions for RNA: ENST00000495208.5

SFXN5-221, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 808 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-221ENST00000495208 POGZQ7Z3K3 1410 aa27.66■■■□□ 2.02
SFXN5-221ENST00000495208 SCAPERQ9BY12 1400 aa27.65■■■□□ 2.02
SFXN5-221ENST00000495208 CCDC18Q5T9S5 1454 aa27.63■■■□□ 2.01
SFXN5-221ENST00000495208 MADDQ8WXG6 1647 aa27.61■■■□□ 2.01
SFXN5-221ENST00000495208 CASKIN1Q8WXD9 1431 aa27.6■■■□□ 2.01
SFXN5-221ENST00000495208 ARHGAP5Q13017 1502 aa27.58■■■□□ 2.01
SFXN5-221ENST00000495208 LRRIQ1Q96JM4 1722 aa27.58■■■□□ 2.01
SFXN5-221ENST00000495208 PCF11O94913 1555 aaKnown RBP27.57■■■□□ 2
SFXN5-221ENST00000495208 YEATS2Q9ULM3 1422 aa27.55■■■□□ 2
SFXN5-221ENST00000495208 ZNF518AQ6AHZ1 1483 aa27.54■■■□□ 2
SFXN5-221ENST00000495208 RIMS1Q86UR5 1692 aaKnown RBP27.52■■■□□ 2
SFXN5-221ENST00000495208 FYCO1Q9BQS8 1478 aa27.52■■■□□ 2
SFXN5-221ENST00000495208 ATP10AO60312 1499 aa27.49■■□□□ 1.99
SFXN5-221ENST00000495208 C9orf84Q5VXU9 1444 aa27.48■■□□□ 1.99
SFXN5-221ENST00000495208 PREX2Q70Z35 1606 aa27.45■■□□□ 1.99
SFXN5-221ENST00000495208 MYT1LQ9UL68 1186 aa27.45■■□□□ 1.98
SFXN5-221ENST00000495208 CDC42BPBQ9Y5S2 1711 aa27.44■■□□□ 1.98
SFXN5-221ENST00000495208 KDM5CP41229 1560 aa27.43■■□□□ 1.98
SFXN5-221ENST00000495208 FER1L4A9Z1Z3 1794 aa27.43■■□□□ 1.98
SFXN5-221ENST00000495208 MLECQ14165 292 aa27.42■■□□□ 1.98
SFXN5-221ENST00000495208 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
SFXN5-221ENST00000495208 ILDR1Q86SU0 546 aaPredicted RBP27.41■■□□□ 1.98
SFXN5-221ENST00000495208 AFAP1Q8N556 730 aa27.39■■□□□ 1.98
SFXN5-221ENST00000495208 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
SFXN5-221ENST00000495208 ABCC1P33527 1531 aa27.37■■□□□ 1.97
SFXN5-221ENST00000495208 PLPPR3Q6T4P5 718 aa27.36■■□□□ 1.97
SFXN5-221ENST00000495208 CDC42BPAQ5VT25 1732 aa27.36■■□□□ 1.97
SFXN5-221ENST00000495208 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
SFXN5-221ENST00000495208 MLH3Q9UHC1 1453 aa27.34■■□□□ 1.97
SFXN5-221ENST00000495208 ITSN2Q9NZM3 1697 aa27.33■■□□□ 1.97
SFXN5-221ENST00000495208 REREQ9P2R6 1566 aa27.31■■□□□ 1.96
SFXN5-221ENST00000495208 DIP2CQ9Y2E4 1556 aa27.31■■□□□ 1.96
SFXN5-221ENST00000495208 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
SFXN5-221ENST00000495208 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
SFXN5-221ENST00000495208 MTUS2Q5JR59 1369 aa27.26■■□□□ 1.95
SFXN5-221ENST00000495208 ZNF777Q9ULD5 760 aaPredicted RBP27.26■■□□□ 1.95
SFXN5-221ENST00000495208 GPATCH8Q9UKJ3 1502 aaKnown RBP27.24■■□□□ 1.95
SFXN5-221ENST00000495208 CCNB3Q8WWL7 1395 aa27.23■■□□□ 1.95
SFXN5-221ENST00000495208 ESF1Q9H501 851 aaKnown RBP27.23■■□□□ 1.95
SFXN5-221ENST00000495208 PLEKHH2Q8IVE3 1493 aa27.22■■□□□ 1.95
SFXN5-221ENST00000495208 AGLP35573 1532 aa27.21■■□□□ 1.95
SFXN5-221ENST00000495208 CFDP1Q9UEE9 299 aaPredicted RBP27.21■■□□□ 1.95
SFXN5-221ENST00000495208 SAMD9LQ8IVG5 1584 aa27.21■■□□□ 1.95
SFXN5-221ENST00000495208 PREX1Q8TCU6 1659 aa27.21■■□□□ 1.95
SFXN5-221ENST00000495208 SYCP2Q9BX26 1530 aa27.2■■□□□ 1.94
SFXN5-221ENST00000495208 KIDINS220Q9ULH0 1771 aa27.2■■□□□ 1.94
SFXN5-221ENST00000495208 CEP162Q5TB80 1403 aa27.19■■□□□ 1.94
SFXN5-221ENST00000495208 HSPA2P54652 639 aa27.19■■□□□ 1.94
SFXN5-221ENST00000495208 KIAA1107Q9UPP5 1409 aa27.17■■□□□ 1.94
SFXN5-221ENST00000495208 SPAG9O60271 1321 aaKnown RBP27.16■■□□□ 1.94
SFXN5-221ENST00000495208 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
SFXN5-221ENST00000495208 SETD1BQ9UPS6 1966 aaKnown RBP27.15■■□□□ 1.94
SFXN5-221ENST00000495208 CEBPAP49715 358 aaPredicted RBP27.14■■□□□ 1.94
SFXN5-221ENST00000495208 FBXO41Q8TF61 875 aa27.13■■□□□ 1.93
SFXN5-221ENST00000495208 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.93
SFXN5-221ENST00000495208 CNTLNQ9NXG0 1405 aa27.12■■□□□ 1.93
SFXN5-221ENST00000495208 UHRF1BP1Q6BDS2 1440 aa27.11■■□□□ 1.93
SFXN5-221ENST00000495208 ATP7AQ04656 1500 aa27.1■■□□□ 1.93
SFXN5-221ENST00000495208 C3P01024 1663 aa27.08■■□□□ 1.92
SFXN5-221ENST00000495208 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
SFXN5-221ENST00000495208 INO80Q9ULG1 1556 aaPredicted RBP27.05■■□□□ 1.92
SFXN5-221ENST00000495208 SUPT6HQ7KZ85 1726 aaKnown RBP27.03■■□□□ 1.92
SFXN5-221ENST00000495208 DMRT2Q9Y5R5 561 aa27.03■■□□□ 1.92
SFXN5-221ENST00000495208 A2MP01023 1474 aa27■■□□□ 1.91
SFXN5-221ENST00000495208 MROH2AA6NES4 1674 aa27■■□□□ 1.91
SFXN5-221ENST00000495208 ADGBQ8N7X0 1667 aa26.99■■□□□ 1.91
SFXN5-221ENST00000495208 PLXNC1O60486 1568 aa26.99■■□□□ 1.91
SFXN5-221ENST00000495208 NCOA2Q15596 1464 aa26.95■■□□□ 1.91
SFXN5-221ENST00000495208 ZNF644Q9H582 1327 aaPredicted RBP26.94■■□□□ 1.9
SFXN5-221ENST00000495208 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
SFXN5-221ENST00000495208 NPATQ14207 1427 aa26.94■■□□□ 1.9
SFXN5-221ENST00000495208 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
SFXN5-221ENST00000495208 VPS8Q8N3P4 1428 aa26.93■■□□□ 1.9
SFXN5-221ENST00000495208 RSPH4AQ5TD94 716 aa26.92■■□□□ 1.9
SFXN5-221ENST00000495208 PPP6R1Q9UPN7 881 aa26.92■■□□□ 1.9
SFXN5-221ENST00000495208 ZMYM3Q14202 1370 aa26.91■■□□□ 1.9
SFXN5-221ENST00000495208 STRCQ7RTU9 1775 aa26.91■■□□□ 1.9
SFXN5-221ENST00000495208 CLTCQ00610 1675 aaKnown RBP26.89■■□□□ 1.9
SFXN5-221ENST00000495208 CCDC141Q6ZP82 1450 aa26.89■■□□□ 1.9
SFXN5-221ENST00000495208 GGT6Q6P531 493 aa26.89■■□□□ 1.9
SFXN5-221ENST00000495208 CAMSAP2Q08AD1 1489 aa26.88■■□□□ 1.89
SFXN5-221ENST00000495208 CERKQ8TCT0 537 aa26.88■■□□□ 1.89
SFXN5-221ENST00000495208 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
SFXN5-221ENST00000495208 LRRC9Q6ZRR7 1453 aa26.84■■□□□ 1.89
SFXN5-221ENST00000495208 DHX29Q7Z478 1369 aaKnown RBP26.84■■□□□ 1.89
SFXN5-221ENST00000495208 PTPRTO14522 1441 aa26.82■■□□□ 1.88
SFXN5-221ENST00000495208 MAP3K1Q13233 1512 aa26.8■■□□□ 1.88
SFXN5-221ENST00000495208 TSPY4P0CV99 314 aa26.8■■□□□ 1.88
SFXN5-221ENST00000495208 TSPY10P0CW01 314 aa26.8■■□□□ 1.88
SFXN5-221ENST00000495208 ARHGEF5Q12774 1597 aa26.8■■□□□ 1.88
SFXN5-221ENST00000495208 NCOA1Q15788 1441 aa26.79■■□□□ 1.88
SFXN5-221ENST00000495208 FAM135AQ9P2D6 1515 aa26.77■■□□□ 1.88
SFXN5-221ENST00000495208 CAMSAP1Q5T5Y3 1602 aa26.76■■□□□ 1.87
SFXN5-221ENST00000495208 MYO3AQ8NEV4 1616 aa26.76■■□□□ 1.87
SFXN5-221ENST00000495208 PTPRKQ15262 1439 aa26.76■■□□□ 1.87
SFXN5-221ENST00000495208 ZNF142P52746 1687 aaPredicted RBP26.76■■□□□ 1.87
SFXN5-221ENST00000495208 KIF3BO15066 747 aa26.75■■□□□ 1.87
SFXN5-221ENST00000495208 CEP170BQ9Y4F5 1589 aaPredicted RBP26.73■■□□□ 1.87
SFXN5-221ENST00000495208 APLP2Q06481 763 aa26.72■■□□□ 1.87
SFXN5-221ENST00000495208 KDM5DQ9BY66 1539 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms