RNA–Protein interactions for RNA: ENST00000495208.5

SFXN5-221, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 808 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-221ENST00000495208 NISCHQ9Y2I1 1504 aa42.16■■■■■ 4.34
SFXN5-221ENST00000495208 CCDC180Q9P1Z9 1646 aa37.86■■■■□ 3.65
SFXN5-221ENST00000495208 ABCC9O60706 1549 aa37.64■■■■□ 3.62
SFXN5-221ENST00000495208 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
SFXN5-221ENST00000495208 NACADO15069 1562 aa35.76■■■■□ 3.31
SFXN5-221ENST00000495208 DCAF8L2P0C7V8 631 aa35.56■■■■□ 3.28
SFXN5-221ENST00000495208 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.24
SFXN5-221ENST00000495208 UNC13AQ9UPW8 1703 aa35.07■■■■□ 3.2
SFXN5-221ENST00000495208 DNAJC5BQ9UF47 199 aa35.06■■■■□ 3.2
SFXN5-221ENST00000495208 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.2
SFXN5-221ENST00000495208 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
SFXN5-221ENST00000495208 DCAF1Q9Y4B6 1507 aa34.89■■■■□ 3.18
SFXN5-221ENST00000495208 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
SFXN5-221ENST00000495208 SHROOM4Q9ULL8 1493 aa34.53■■■■□ 3.12
SFXN5-221ENST00000495208 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
SFXN5-221ENST00000495208 CC2D2AQ9P2K1 1620 aa34.03■■■■□ 3.04
SFXN5-221ENST00000495208 EIF4G1Q04637 1599 aaKnown RBP34.01■■■■□ 3.03
SFXN5-221ENST00000495208 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
SFXN5-221ENST00000495208 NCAPD3P42695 1498 aa32.96■■■□□ 2.87
SFXN5-221ENST00000495208 SMARCA4P51532 1647 aa32.88■■■□□ 2.85
SFXN5-221ENST00000495208 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
SFXN5-221ENST00000495208 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
SFXN5-221ENST00000495208 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
SFXN5-221ENST00000495208 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
SFXN5-221ENST00000495208 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
SFXN5-221ENST00000495208 ERCC6Q03468 1493 aa32.6■■■□□ 2.81
SFXN5-221ENST00000495208 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
SFXN5-221ENST00000495208 CUX2O14529 1486 aa32.48■■■□□ 2.79
SFXN5-221ENST00000495208 MROH2BQ7Z745 1585 aa32.44■■■□□ 2.78
SFXN5-221ENST00000495208 NESP48681 1621 aa32.33■■■□□ 2.77
SFXN5-221ENST00000495208 LAMC3Q9Y6N6 1575 aa32.25■■■□□ 2.75
SFXN5-221ENST00000495208 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
SFXN5-221ENST00000495208 PDS5BQ9NTI5 1447 aa32.09■■■□□ 2.73
SFXN5-221ENST00000495208 WIZO95785 1651 aa32.07■■■□□ 2.72
SFXN5-221ENST00000495208 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
SFXN5-221ENST00000495208 KIF21AQ7Z4S6 1674 aa31.98■■■□□ 2.71
SFXN5-221ENST00000495208 CADPSQ9ULU8 1353 aa31.97■■■□□ 2.71
SFXN5-221ENST00000495208 RSF1Q96T23 1441 aaPredicted RBP31.83■■■□□ 2.69
SFXN5-221ENST00000495208 MRC2Q9UBG0 1479 aa31.76■■■□□ 2.67
SFXN5-221ENST00000495208 TOP2AP11388 1531 aaKnown RBP31.74■■■□□ 2.67
SFXN5-221ENST00000495208 CEP164Q9UPV0 1460 aa31.67■■■□□ 2.66
SFXN5-221ENST00000495208 WDR62O43379 1518 aa31.65■■■□□ 2.66
SFXN5-221ENST00000495208 CFTRP13569 1480 aa31.63■■■□□ 2.65
SFXN5-221ENST00000495208 FANCD2Q9BXW9 1451 aa31.61■■■□□ 2.65
SFXN5-221ENST00000495208 PRDM2Q13029 1718 aa31.39■■■□□ 2.62
SFXN5-221ENST00000495208 CCDC88BA6NC98 1476 aa31.32■■■□□ 2.6
SFXN5-221ENST00000495208 URB2Q14146 1524 aaKnown RBP31.29■■■□□ 2.6
SFXN5-221ENST00000495208 ABCC8Q09428 1581 aa31.06■■■□□ 2.56
SFXN5-221ENST00000495208 IFT140Q96RY7 1462 aa31.03■■■□□ 2.56
SFXN5-221ENST00000495208 OSCARQ8IYS5 282 aa31.01■■■□□ 2.55
SFXN5-221ENST00000495208 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
SFXN5-221ENST00000495208 DNMBPQ6XZF7 1577 aa30.95■■■□□ 2.54
SFXN5-221ENST00000495208 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
SFXN5-221ENST00000495208 ZNF608Q9ULD9 1512 aaPredicted RBP30.87■■■□□ 2.53
SFXN5-221ENST00000495208 EIF4G3O43432 1585 aaKnown RBP30.78■■■□□ 2.52
SFXN5-221ENST00000495208 TARBP1Q13395 1621 aaKnown RBP30.71■■■□□ 2.51
SFXN5-221ENST00000495208 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.5
SFXN5-221ENST00000495208 AQRO60306 1485 aaKnown RBP eCLIP30.62■■■□□ 2.49
SFXN5-221ENST00000495208 SOGA1O94964 1423 aa30.58■■■□□ 2.49
SFXN5-221ENST00000495208 SUPT5HO00267 1087 aaKnown RBP30.54■■■□□ 2.48
SFXN5-221ENST00000495208 RAD54L2Q9Y4B4 1467 aa30.54■■■□□ 2.48
SFXN5-221ENST00000495208 FGD5Q6ZNL6 1462 aa30.53■■■□□ 2.48
SFXN5-221ENST00000495208 WDR97A6NE52 1622 aa30.53■■■□□ 2.48
SFXN5-221ENST00000495208 RIMBP3CA6NJZ7 1639 aa30.53■■■□□ 2.48
SFXN5-221ENST00000495208 RIMBP3BA6NNM3 1639 aa30.53■■■□□ 2.48
SFXN5-221ENST00000495208 RIMBP3Q9UFD9 1639 aa30.53■■■□□ 2.48
SFXN5-221ENST00000495208 CHD1O14646 1710 aa30.52■■■□□ 2.48
SFXN5-221ENST00000495208 CUX1P39880 1505 aa30.49■■■□□ 2.47
SFXN5-221ENST00000495208 FBLN2P98095 1184 aa30.48■■■□□ 2.47
SFXN5-221ENST00000495208 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
SFXN5-221ENST00000495208 TDRD9Q8NDG6 1382 aaKnown RBP30.46■■■□□ 2.47
SFXN5-221ENST00000495208 SNAPC4Q5SXM2 1469 aa30.35■■■□□ 2.45
SFXN5-221ENST00000495208 MAGI1Q96QZ7 1491 aaPredicted RBP30.34■■■□□ 2.45
SFXN5-221ENST00000495208 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
SFXN5-221ENST00000495208 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
SFXN5-221ENST00000495208 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
SFXN5-221ENST00000495208 CYB5RLQ6IPT4 315 aa30.23■■■□□ 2.43
SFXN5-221ENST00000495208 GAPVD1Q14C86 1478 aa30.23■■■□□ 2.43
SFXN5-221ENST00000495208 SYNJ2O15056 1496 aa30.22■■■□□ 2.43
SFXN5-221ENST00000495208 PBRM1Q86U86 1689 aa30.21■■■□□ 2.43
SFXN5-221ENST00000495208 ABCA10Q8WWZ4 1543 aa30.21■■■□□ 2.43
SFXN5-221ENST00000495208 WRNQ14191 1432 aaPredicted RBP eCLIP30.16■■■□□ 2.421e-6■■■■■ 58.5
SFXN5-221ENST00000495208 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
SFXN5-221ENST00000495208 ARAP1Q96P48 1450 aa30.14■■■□□ 2.42
SFXN5-221ENST00000495208 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.41
SFXN5-221ENST00000495208 TOP2BQ02880 1626 aa30.09■■■□□ 2.41
SFXN5-221ENST00000495208 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
SFXN5-221ENST00000495208 GRIN2AQ12879 1464 aa29.92■■■□□ 2.38
SFXN5-221ENST00000495208 ADAMTS12P58397 1594 aa29.91■■■□□ 2.38
SFXN5-221ENST00000495208 TRHP20396 242 aaPredicted RBP29.91■■■□□ 2.38
SFXN5-221ENST00000495208 ERICH3Q5RHP9 1530 aa29.87■■■□□ 2.37
SFXN5-221ENST00000495208 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
SFXN5-221ENST00000495208 NUP160Q12769 1436 aa29.79■■■□□ 2.36
SFXN5-221ENST00000495208 CEP170Q5SW79 1584 aa29.76■■■□□ 2.35
SFXN5-221ENST00000495208 SHROOM2Q13796 1616 aa29.65■■■□□ 2.34
SFXN5-221ENST00000495208 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
SFXN5-221ENST00000495208 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
SFXN5-221ENST00000495208 PRG4Q92954 1404 aaPredicted RBP29.52■■■□□ 2.32
SFXN5-221ENST00000495208 JPH4Q96JJ6 628 aa29.5■■■□□ 2.31
SFXN5-221ENST00000495208 CUL7Q14999 1698 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms