RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
SRRM1-218ENST00000494934 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
SRRM1-218ENST00000494934 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
SRRM1-218ENST00000494934 NBR1Q14596 966 aa11.9□□□□□ -0.5
SRRM1-218ENST00000494934 MFSD10Q14728 455 aa11.89□□□□□ -0.51
SRRM1-218ENST00000494934 KIF3CO14782 793 aa11.88□□□□□ -0.51
SRRM1-218ENST00000494934 PDE4AP27815 886 aa11.85□□□□□ -0.51
SRRM1-218ENST00000494934 LARP6Q9BRS8 491 aaKnown RBP11.85□□□□□ -0.51
SRRM1-218ENST00000494934 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
SRRM1-218ENST00000494934 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
SRRM1-218ENST00000494934 DSG2Q14126 1118 aa11.8□□□□□ -0.52
SRRM1-218ENST00000494934 G3V3G9 751 aa11.79□□□□□ -0.52
SRRM1-218ENST00000494934 KCNV2Q8TDN2 545 aa11.79□□□□□ -0.52
SRRM1-218ENST00000494934 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
SRRM1-218ENST00000494934 FOXK1P85037 733 aa11.77□□□□□ -0.53
SRRM1-218ENST00000494934 CAMK2BQ13554 666 aa11.77□□□□□ -0.53
SRRM1-218ENST00000494934 PPP1R15BQ5SWA1 713 aa11.76□□□□□ -0.53
SRRM1-218ENST00000494934 WDR70Q9NW82 654 aa11.76□□□□□ -0.53
SRRM1-218ENST00000494934 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
SRRM1-218ENST00000494934 E2F4Q16254 413 aa11.73□□□□□ -0.53
SRRM1-218ENST00000494934 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
SRRM1-218ENST00000494934 PLPP6Q8IY26 295 aa11.71□□□□□ -0.53
SRRM1-218ENST00000494934 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
SRRM1-218ENST00000494934 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
SRRM1-218ENST00000494934 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
SRRM1-218ENST00000494934 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
SRRM1-218ENST00000494934 P3H3Q8IVL6 736 aa11.66□□□□□ -0.54
SRRM1-218ENST00000494934 ARHGEF1Q92888 912 aaKnown RBP11.64□□□□□ -0.55
SRRM1-218ENST00000494934 LHX8Q68G74 356 aa11.63□□□□□ -0.55
SRRM1-218ENST00000494934 MAMSTRQ6ZN01 415 aa11.61□□□□□ -0.55
SRRM1-218ENST00000494934 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
SRRM1-218ENST00000494934 SCUBE2Q9NQ36 999 aa11.61□□□□□ -0.55
SRRM1-218ENST00000494934 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
SRRM1-218ENST00000494934 HOXB3P14651 431 aaPredicted RBP11.59□□□□□ -0.55
SRRM1-218ENST00000494934 DPYSL4O14531 572 aa11.57□□□□□ -0.56
SRRM1-218ENST00000494934 SLC34A2O95436 690 aa11.57□□□□□ -0.56
SRRM1-218ENST00000494934 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
SRRM1-218ENST00000494934 UPF1Q92900 1129 aaKnown RBP eCLIP11.54□□□□□ -0.56
SRRM1-218ENST00000494934 SEMA3EO15041 775 aa11.53□□□□□ -0.56
SRRM1-218ENST00000494934 PDIA6Q15084 440 aa11.52□□□□□ -0.57
SRRM1-218ENST00000494934 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
SRRM1-218ENST00000494934 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
SRRM1-218ENST00000494934 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
SRRM1-218ENST00000494934 PCDHGA4Q9Y5G9 962 aa11.49□□□□□ -0.57
SRRM1-218ENST00000494934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
SRRM1-218ENST00000494934 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-218ENST00000494934 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
SRRM1-218ENST00000494934 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
SRRM1-218ENST00000494934 SPDYE16A6NNV3 312 aaPredicted RBP11.45□□□□□ -0.58
SRRM1-218ENST00000494934 KHSRPQ92945 711 aaKnown RBP eCLIP11.45□□□□□ -0.58
SRRM1-218ENST00000494934 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
SRRM1-218ENST00000494934 EVI5O60447 810 aa11.43□□□□□ -0.58
SRRM1-218ENST00000494934 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
SRRM1-218ENST00000494934 PTGER2P43116 358 aa11.41□□□□□ -0.58
SRRM1-218ENST00000494934 ARSIQ5FYB1 569 aa11.41□□□□□ -0.58
SRRM1-218ENST00000494934 TBC1D12O60347 775 aa11.39□□□□□ -0.59
SRRM1-218ENST00000494934 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
SRRM1-218ENST00000494934 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
SRRM1-218ENST00000494934 NUDT7P0C024 238 aa11.36□□□□□ -0.59
SRRM1-218ENST00000494934 SNPHO15079 494 aa11.35□□□□□ -0.59
SRRM1-218ENST00000494934 HOXB1P14653 301 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-218ENST00000494934 OSBPP22059 807 aa11.34□□□□□ -0.59
SRRM1-218ENST00000494934 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-218ENST00000494934 DDX12PQ92771 950 aa11.33□□□□□ -0.6
SRRM1-218ENST00000494934 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
SRRM1-218ENST00000494934 ZC3H15Q8WU90 426 aaKnown RBP11.32□□□□□ -0.6
SRRM1-218ENST00000494934 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
SRRM1-218ENST00000494934 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
SRRM1-218ENST00000494934 RBM26Q5T8P6 1007 aaKnown RBP11.31□□□□□ -0.6
SRRM1-218ENST00000494934 ST18O60284 1047 aa11.3□□□□□ -0.6
SRRM1-218ENST00000494934 PCDHGA10Q9Y5H3 936 aa11.3□□□□□ -0.6
SRRM1-218ENST00000494934 LHX6Q9UPM6 363 aa11.29□□□□□ -0.6
SRRM1-218ENST00000494934 FOSBP53539 338 aa11.28□□□□□ -0.6
SRRM1-218ENST00000494934 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
SRRM1-218ENST00000494934 PHF14O94880 888 aa11.27□□□□□ -0.61
SRRM1-218ENST00000494934 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
SRRM1-218ENST00000494934 SMYD5Q6GMV2 418 aa11.26□□□□□ -0.61
SRRM1-218ENST00000494934 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
SRRM1-218ENST00000494934 GPR37O15354 613 aa11.25□□□□□ -0.61
SRRM1-218ENST00000494934 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-218ENST00000494934 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
SRRM1-218ENST00000494934 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
SRRM1-218ENST00000494934 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
SRRM1-218ENST00000494934 EPAS1Q99814 870 aa11.22□□□□□ -0.61
SRRM1-218ENST00000494934 EN1Q05925 392 aaPredicted RBP11.21□□□□□ -0.61
SRRM1-218ENST00000494934 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
SRRM1-218ENST00000494934 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
SRRM1-218ENST00000494934 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
SRRM1-218ENST00000494934 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
SRRM1-218ENST00000494934 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
SRRM1-218ENST00000494934 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
SRRM1-218ENST00000494934 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
SRRM1-218ENST00000494934 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
SRRM1-218ENST00000494934 CDHR5Q9HBB8 845 aa11.19□□□□□ -0.62
SRRM1-218ENST00000494934 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
SRRM1-218ENST00000494934 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-218ENST00000494934 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
SRRM1-218ENST00000494934 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
SRRM1-218ENST00000494934 ZMYND10O75800 440 aa11.16□□□□□ -0.62
SRRM1-218ENST00000494934 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms