RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 CRISPLD2Q9H0B8 497 aa18.11■□□□□ 0.49
HMGB3P14-201ENST00000494195 NCKAP5LQ9HCH0 1330 aa18.1■□□□□ 0.49
HMGB3P14-201ENST00000494195 PDE4AP27815 886 aa18.1■□□□□ 0.49
HMGB3P14-201ENST00000494195 SCUBE2Q9NQ36 999 aa18.08■□□□□ 0.48
HMGB3P14-201ENST00000494195 LHX8Q68G74 356 aa18.07■□□□□ 0.48
HMGB3P14-201ENST00000494195 TMC2Q8TDI7 906 aa18.07■□□□□ 0.48
HMGB3P14-201ENST00000494195 KDM2AQ9Y2K7 1162 aa18.07■□□□□ 0.48
HMGB3P14-201ENST00000494195 GPHNQ9NQX3 736 aaPredicted RBP18.06■□□□□ 0.48
HMGB3P14-201ENST00000494195 TMEM92Q6UXU6 159 aa18.05■□□□□ 0.48
HMGB3P14-201ENST00000494195 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
HMGB3P14-201ENST00000494195 C2orf72A6NCS6 295 aa18.02■□□□□ 0.48
HMGB3P14-201ENST00000494195 KIF3CO14782 793 aa18.02■□□□□ 0.48
HMGB3P14-201ENST00000494195 MFSD10Q14728 455 aa18■□□□□ 0.47
HMGB3P14-201ENST00000494195 WDR70Q9NW82 654 aa17.99■□□□□ 0.47
HMGB3P14-201ENST00000494195 DDX27Q96GQ7 796 aaKnown RBP17.97■□□□□ 0.47
HMGB3P14-201ENST00000494195 FOXK1P85037 733 aa17.95■□□□□ 0.46
HMGB3P14-201ENST00000494195 SLAIN1Q8ND83 568 aa17.94■□□□□ 0.46
HMGB3P14-201ENST00000494195 OTUD5Q96G74 571 aa17.94■□□□□ 0.46
HMGB3P14-201ENST00000494195 DSG2Q14126 1118 aa17.93■□□□□ 0.46
HMGB3P14-201ENST00000494195 PPP1R15BQ5SWA1 713 aa17.93■□□□□ 0.46
HMGB3P14-201ENST00000494195 PLPP6Q8IY26 295 aa17.87■□□□□ 0.45
HMGB3P14-201ENST00000494195 E2F4Q16254 413 aa17.82■□□□□ 0.44
HMGB3P14-201ENST00000494195 CAMK2BQ13554 666 aa17.79■□□□□ 0.44
HMGB3P14-201ENST00000494195 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
HMGB3P14-201ENST00000494195 KCNV2Q8TDN2 545 aa17.74■□□□□ 0.43
HMGB3P14-201ENST00000494195 SNPHO15079 494 aa17.69■□□□□ 0.42
HMGB3P14-201ENST00000494195 SLC34A2O95436 690 aa17.69■□□□□ 0.42
HMGB3P14-201ENST00000494195 EMILIN3Q9NT22 766 aa17.69■□□□□ 0.42
HMGB3P14-201ENST00000494195 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
HMGB3P14-201ENST00000494195 HOXB3P14651 431 aaPredicted RBP17.67■□□□□ 0.42
HMGB3P14-201ENST00000494195 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
HMGB3P14-201ENST00000494195 ARIH1Q9Y4X5 557 aaPredicted RBP17.65■□□□□ 0.42
HMGB3P14-201ENST00000494195 OXER1Q8TDS5 423 aa17.64■□□□□ 0.41
HMGB3P14-201ENST00000494195 PTCD2Q8WV60 388 aaKnown RBP17.63■□□□□ 0.41
HMGB3P14-201ENST00000494195 UPF1Q92900 1129 aaKnown RBP eCLIP17.62■□□□□ 0.41
HMGB3P14-201ENST00000494195 RIMBP2O15034 1052 aa17.6■□□□□ 0.41
HMGB3P14-201ENST00000494195 DPYSL4O14531 572 aa17.58■□□□□ 0.4
HMGB3P14-201ENST00000494195 TBC1D12O60347 775 aa17.58■□□□□ 0.4
HMGB3P14-201ENST00000494195 MAP3K9P80192 1104 aa17.57■□□□□ 0.4
HMGB3P14-201ENST00000494195 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
HMGB3P14-201ENST00000494195 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
HMGB3P14-201ENST00000494195 PCDHGA4Q9Y5G9 962 aa17.56■□□□□ 0.4
HMGB3P14-201ENST00000494195 SPDYE16A6NNV3 312 aaPredicted RBP17.49■□□□□ 0.39
HMGB3P14-201ENST00000494195 GPR153Q6NV75 609 aa17.49■□□□□ 0.39
HMGB3P14-201ENST00000494195 PDIA6Q15084 440 aa17.48■□□□□ 0.39
HMGB3P14-201ENST00000494195 ARSIQ5FYB1 569 aa17.47■□□□□ 0.39
HMGB3P14-201ENST00000494195 NBR1Q14596 966 aa17.46■□□□□ 0.39
HMGB3P14-201ENST00000494195 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
HMGB3P14-201ENST00000494195 EVI5O60447 810 aa17.45■□□□□ 0.38
HMGB3P14-201ENST00000494195 HOXB1P14653 301 aaPredicted RBP17.43■□□□□ 0.38
HMGB3P14-201ENST00000494195 KHSRPQ92945 711 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGB3P14-201ENST00000494195 BCANQ96GW7 911 aa17.42■□□□□ 0.38
HMGB3P14-201ENST00000494195 KDM4FA0A1W2PPD8 638 aa17.41■□□□□ 0.38
HMGB3P14-201ENST00000494195 ST18O60284 1047 aa17.4■□□□□ 0.38
HMGB3P14-201ENST00000494195 NUDT7P0C024 238 aa17.4■□□□□ 0.38
HMGB3P14-201ENST00000494195 FAM163AQ96GL9 167 aaPredicted RBP17.39■□□□□ 0.37
HMGB3P14-201ENST00000494195 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
HMGB3P14-201ENST00000494195 SEMA3EO15041 775 aa17.36■□□□□ 0.37
HMGB3P14-201ENST00000494195 PTGER2P43116 358 aa17.32■□□□□ 0.36
HMGB3P14-201ENST00000494195 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
HMGB3P14-201ENST00000494195 LCE2DQ5TA82 110 aaPredicted RBP17.27■□□□□ 0.36
HMGB3P14-201ENST00000494195 LHX6Q9UPM6 363 aa17.27■□□□□ 0.36
HMGB3P14-201ENST00000494195 MLLT3P42568 568 aaPredicted RBP17.26■□□□□ 0.35
HMGB3P14-201ENST00000494195 DDX12PQ92771 950 aa17.25■□□□□ 0.35
HMGB3P14-201ENST00000494195 GRXCR2A6NFK2 248 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 EMP3P54852 163 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 SMYD5Q6GMV2 418 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 MARVELD3Q96A59 401 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
HMGB3P14-201ENST00000494195 PHF14O94880 888 aa17.21■□□□□ 0.35
HMGB3P14-201ENST00000494195 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
HMGB3P14-201ENST00000494195 FOSBP53539 338 aa17.2■□□□□ 0.34
HMGB3P14-201ENST00000494195 ERBB3P21860 1342 aa17.19■□□□□ 0.34
HMGB3P14-201ENST00000494195 ZNF454Q8N9F8 522 aa17.18■□□□□ 0.34
HMGB3P14-201ENST00000494195 EPAS1Q99814 870 aa17.18■□□□□ 0.34
HMGB3P14-201ENST00000494195 PCDHGA10Q9Y5H3 936 aa17.18■□□□□ 0.34
HMGB3P14-201ENST00000494195 TYW1BQ6NUM6 668 aa17.15■□□□□ 0.34
HMGB3P14-201ENST00000494195 OSBPP22059 807 aa17.14■□□□□ 0.33
HMGB3P14-201ENST00000494195 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
HMGB3P14-201ENST00000494195 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
HMGB3P14-201ENST00000494195 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
HMGB3P14-201ENST00000494195 VARS2Q5ST30 1063 aaKnown RBP17.12■□□□□ 0.33
HMGB3P14-201ENST00000494195 ZDHHC16Q969W1 377 aa17.11■□□□□ 0.33
HMGB3P14-201ENST00000494195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.33
HMGB3P14-201ENST00000494195 EN1Q05925 392 aaPredicted RBP17.08■□□□□ 0.32
HMGB3P14-201ENST00000494195 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
HMGB3P14-201ENST00000494195 HS3ST6Q96QI5 342 aa17.06■□□□□ 0.32
HMGB3P14-201ENST00000494195 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
HMGB3P14-201ENST00000494195 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
HMGB3P14-201ENST00000494195 ADAM33Q9BZ11 813 aa17.05■□□□□ 0.32
HMGB3P14-201ENST00000494195 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
HMGB3P14-201ENST00000494195 MAP3K7O43318 606 aa17.03■□□□□ 0.32
HMGB3P14-201ENST00000494195 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
HMGB3P14-201ENST00000494195 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
HMGB3P14-201ENST00000494195 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
HMGB3P14-201ENST00000494195 ZNF687Q8N1G0 1237 aa17■□□□□ 0.31
HMGB3P14-201ENST00000494195 C6orf132Q5T0Z8 1188 aa16.97■□□□□ 0.31
HMGB3P14-201ENST00000494195 TSR1Q2NL82 804 aaKnown RBP16.96■□□□□ 0.31
HMGB3P14-201ENST00000494195 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms