RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
VEGFA-214ENST00000493786 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
VEGFA-214ENST00000493786 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-214ENST00000493786 ITSN2Q9NZM3 1697 aa11.7□□□□□ -0.54
VEGFA-214ENST00000493786 PREX2Q70Z35 1606 aa11.7□□□□□ -0.54
VEGFA-214ENST00000493786 NEO1Q92859 1461 aa11.7□□□□□ -0.54
VEGFA-214ENST00000493786 MYOM3Q5VTT5 1437 aa11.69□□□□□ -0.54
VEGFA-214ENST00000493786 AKNAQ7Z591 1439 aa11.68□□□□□ -0.54
VEGFA-214ENST00000493786 CDC42BPAQ5VT25 1732 aa11.67□□□□□ -0.54
VEGFA-214ENST00000493786 PPRC1Q5VV67 1664 aaKnown RBP11.67□□□□□ -0.54
VEGFA-214ENST00000493786 MIA2Q96PC5 1412 aa11.67□□□□□ -0.54
VEGFA-214ENST00000493786 ADGRL1O94910 1474 aa11.66□□□□□ -0.54
VEGFA-214ENST00000493786 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
VEGFA-214ENST00000493786 CDC42BPBQ9Y5S2 1711 aa11.65□□□□□ -0.54
VEGFA-214ENST00000493786 FGD6Q6ZV73 1430 aa11.64□□□□□ -0.55
VEGFA-214ENST00000493786 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-214ENST00000493786 SCAPERQ9BY12 1400 aa11.63□□□□□ -0.55
VEGFA-214ENST00000493786 CAMSAP2Q08AD1 1489 aa11.63□□□□□ -0.55
VEGFA-214ENST00000493786 KIAA1107Q9UPP5 1409 aa11.62□□□□□ -0.55
VEGFA-214ENST00000493786 KDM6BO15054 1643 aa11.62□□□□□ -0.55
VEGFA-214ENST00000493786 FAM50AQ14320 339 aaKnown RBP11.62□□□□□ -0.55
VEGFA-214ENST00000493786 SAMD9LQ8IVG5 1584 aa11.62□□□□□ -0.55
VEGFA-214ENST00000493786 ZNF644Q9H582 1327 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-214ENST00000493786 ABCC1P33527 1531 aa11.61□□□□□ -0.55
VEGFA-214ENST00000493786 SYCP2Q9BX26 1530 aa11.6□□□□□ -0.55
VEGFA-214ENST00000493786 PTPN23Q9H3S7 1636 aa11.6□□□□□ -0.55
VEGFA-214ENST00000493786 ZNF518AQ6AHZ1 1483 aa11.6□□□□□ -0.55
VEGFA-214ENST00000493786 HNRNPMP52272 730 aaKnown RBP eCLIP11.6□□□□□ -0.551e-12■■■■■ 34.3
VEGFA-214ENST00000493786 RSPH4AQ5TD94 716 aa11.6□□□□□ -0.55
VEGFA-214ENST00000493786 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
VEGFA-214ENST00000493786 POGZQ7Z3K3 1410 aa11.6□□□□□ -0.55
VEGFA-214ENST00000493786 RAPGEF3O95398 923 aa11.59□□□□□ -0.55
VEGFA-214ENST00000493786 TCOF1Q13428 1488 aaKnown RBP11.58□□□□□ -0.56
VEGFA-214ENST00000493786 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
VEGFA-214ENST00000493786 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
VEGFA-214ENST00000493786 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
VEGFA-214ENST00000493786 ARHGEF12Q9NZN5 1544 aa11.56□□□□□ -0.56
VEGFA-214ENST00000493786 AFAP1Q8N556 730 aa11.56□□□□□ -0.56
VEGFA-214ENST00000493786 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
VEGFA-214ENST00000493786 TRAPPC8Q9Y2L5 1435 aa11.56□□□□□ -0.56
VEGFA-214ENST00000493786 COL17A1Q9UMD9 1497 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-214ENST00000493786 SPAG9O60271 1321 aaKnown RBP11.56□□□□□ -0.56
VEGFA-214ENST00000493786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.562e-22■□□□□ 9.7
VEGFA-214ENST00000493786 MBD5Q9P267 1494 aa11.55□□□□□ -0.56
VEGFA-214ENST00000493786 ARHGEF5Q12774 1597 aa11.54□□□□□ -0.56
VEGFA-214ENST00000493786 MAGI2Q86UL8 1455 aa11.53□□□□□ -0.56
VEGFA-214ENST00000493786 RICTORQ6R327 1708 aa11.53□□□□□ -0.56
VEGFA-214ENST00000493786 ZMYM4Q5VZL5 1548 aa11.53□□□□□ -0.56
VEGFA-214ENST00000493786 KDM5CP41229 1560 aa11.53□□□□□ -0.56
VEGFA-214ENST00000493786 FRMPD1Q5SYB0 1578 aa11.53□□□□□ -0.56
VEGFA-214ENST00000493786 DAPK1P53355 1430 aa11.52□□□□□ -0.56
VEGFA-214ENST00000493786 ITGAEP38570 1179 aa11.52□□□□□ -0.57
VEGFA-214ENST00000493786 HECW2Q9P2P5 1572 aa11.52□□□□□ -0.57
VEGFA-214ENST00000493786 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
VEGFA-214ENST00000493786 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
VEGFA-214ENST00000493786 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
VEGFA-214ENST00000493786 SHANK2Q9UPX8 1470 aa11.51□□□□□ -0.57
VEGFA-214ENST00000493786 ZFYVE16Q7Z3T8 1539 aa11.51□□□□□ -0.57
VEGFA-214ENST00000493786 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
VEGFA-214ENST00000493786 ABCC5O15440 1437 aa11.51□□□□□ -0.57
VEGFA-214ENST00000493786 ATP7AQ04656 1500 aa11.5□□□□□ -0.57
VEGFA-214ENST00000493786 CHIC2Q9UKJ5 165 aa11.49□□□□□ -0.57
VEGFA-214ENST00000493786 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
VEGFA-214ENST00000493786 ARHGEF40Q8TER5 1519 aa11.48□□□□□ -0.57
VEGFA-214ENST00000493786 INO80Q9ULG1 1556 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-214ENST00000493786 MAST1Q9Y2H9 1570 aa11.48□□□□□ -0.57
VEGFA-214ENST00000493786 CROCC2H7BZ55 1655 aa11.48□□□□□ -0.57
VEGFA-214ENST00000493786 YEATS2Q9ULM3 1422 aa11.47□□□□□ -0.57
VEGFA-214ENST00000493786 ATP10AO60312 1499 aa11.46□□□□□ -0.57
VEGFA-214ENST00000493786 ARID4BQ4LE39 1312 aaPredicted RBP11.46□□□□□ -0.57
VEGFA-214ENST00000493786 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
VEGFA-214ENST00000493786 RRP7BPQ9NSQ0 103 aa11.45□□□□□ -0.58
VEGFA-214ENST00000493786 KIDINS220Q9ULH0 1771 aa11.45□□□□□ -0.58
VEGFA-214ENST00000493786 DIP2CQ9Y2E4 1556 aa11.45□□□□□ -0.58
VEGFA-214ENST00000493786 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
VEGFA-214ENST00000493786 ROCK1Q13464 1354 aa11.44□□□□□ -0.58
VEGFA-214ENST00000493786 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
VEGFA-214ENST00000493786 PLXNC1O60486 1568 aa11.44□□□□□ -0.58
VEGFA-214ENST00000493786 A2MP01023 1474 aa11.44□□□□□ -0.58
VEGFA-214ENST00000493786 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
VEGFA-214ENST00000493786 TRIM26Q12899 539 aaPredicted RBP11.43□□□□□ -0.58
VEGFA-214ENST00000493786 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
VEGFA-214ENST00000493786 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
VEGFA-214ENST00000493786 DHX29Q7Z478 1369 aaKnown RBP11.42□□□□□ -0.58
VEGFA-214ENST00000493786 DUOX2Q9NRD8 1548 aa11.42□□□□□ -0.58
VEGFA-214ENST00000493786 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
VEGFA-214ENST00000493786 ERBINQ96RT1 1412 aa11.4□□□□□ -0.58
VEGFA-214ENST00000493786 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
VEGFA-214ENST00000493786 KIF3BO15066 747 aa11.38□□□□□ -0.59
VEGFA-214ENST00000493786 AGLP35573 1532 aa11.38□□□□□ -0.59
VEGFA-214ENST00000493786 HFM1A2PYH4 1435 aa11.37□□□□□ -0.59
VEGFA-214ENST00000493786 MLECQ14165 292 aa11.37□□□□□ -0.59
VEGFA-214ENST00000493786 ESF1Q9H501 851 aaKnown RBP11.37□□□□□ -0.59
VEGFA-214ENST00000493786 GGT6Q6P531 493 aa11.36□□□□□ -0.59
VEGFA-214ENST00000493786 NAIPQ13075 1403 aa11.35□□□□□ -0.59
VEGFA-214ENST00000493786 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
VEGFA-214ENST00000493786 KANK1Q14678 1352 aa11.34□□□□□ -0.59
VEGFA-214ENST00000493786 SETD5Q9C0A6 1442 aa11.34□□□□□ -0.59
VEGFA-214ENST00000493786 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
VEGFA-214ENST00000493786 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms