RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
ABCD4-216ENST00000493752 ARHGAP5Q13017 1502 aa12.53□□□□□ -0.4
ABCD4-216ENST00000493752 MYOM3Q5VTT5 1437 aa12.53□□□□□ -0.4
ABCD4-216ENST00000493752 MIA2Q96PC5 1412 aa12.53□□□□□ -0.4
ABCD4-216ENST00000493752 ZNF644Q9H582 1327 aaPredicted RBP12.52□□□□□ -0.41
ABCD4-216ENST00000493752 PPRC1Q5VV67 1664 aaKnown RBP12.51□□□□□ -0.41
ABCD4-216ENST00000493752 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
ABCD4-216ENST00000493752 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
ABCD4-216ENST00000493752 RAPGEF3O95398 923 aa12.5□□□□□ -0.41
ABCD4-216ENST00000493752 KIAA1107Q9UPP5 1409 aa12.5□□□□□ -0.41
ABCD4-216ENST00000493752 COL17A1Q9UMD9 1497 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-216ENST00000493752 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
ABCD4-216ENST00000493752 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
ABCD4-216ENST00000493752 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
ABCD4-216ENST00000493752 HNRNPMP52272 730 aaKnown RBP eCLIP12.49□□□□□ -0.41
ABCD4-216ENST00000493752 MYO5CQ9NQX4 1742 aa12.48□□□□□ -0.41
ABCD4-216ENST00000493752 DENND4BO75064 1496 aaPredicted RBP12.48□□□□□ -0.41
ABCD4-216ENST00000493752 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
ABCD4-216ENST00000493752 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
ABCD4-216ENST00000493752 FGD6Q6ZV73 1430 aa12.47□□□□□ -0.41
ABCD4-216ENST00000493752 CFAP74Q9C0B2 1584 aa12.47□□□□□ -0.41
ABCD4-216ENST00000493752 CDC42BPAQ5VT25 1732 aa12.46□□□□□ -0.41
ABCD4-216ENST00000493752 CDC42BPBQ9Y5S2 1711 aa12.46□□□□□ -0.41
ABCD4-216ENST00000493752 ARHGEF12Q9NZN5 1544 aa12.45□□□□□ -0.42
ABCD4-216ENST00000493752 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
ABCD4-216ENST00000493752 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
ABCD4-216ENST00000493752 MBD5Q9P267 1494 aa12.44□□□□□ -0.42
ABCD4-216ENST00000493752 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
ABCD4-216ENST00000493752 POGZQ7Z3K3 1410 aa12.44□□□□□ -0.42
ABCD4-216ENST00000493752 TRAPPC8Q9Y2L5 1435 aa12.44□□□□□ -0.42
ABCD4-216ENST00000493752 CAMSAP2Q08AD1 1489 aa12.43□□□□□ -0.42
ABCD4-216ENST00000493752 TSPY4P0CV99 314 aa12.43□□□□□ -0.42
ABCD4-216ENST00000493752 TSPY10P0CW01 314 aa12.43□□□□□ -0.42
ABCD4-216ENST00000493752 KDM6BO15054 1643 aa12.43□□□□□ -0.42
ABCD4-216ENST00000493752 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
ABCD4-216ENST00000493752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
ABCD4-216ENST00000493752 ABCC1P33527 1531 aa12.42□□□□□ -0.42
ABCD4-216ENST00000493752 TCOF1Q13428 1488 aaKnown RBP12.42□□□□□ -0.42
ABCD4-216ENST00000493752 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
ABCD4-216ENST00000493752 SPAG9O60271 1321 aaKnown RBP12.41□□□□□ -0.42
ABCD4-216ENST00000493752 RRBP1Q9P2E9 1410 aaKnown RBP12.4□□□□□ -0.42
ABCD4-216ENST00000493752 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
ABCD4-216ENST00000493752 SYCP2Q9BX26 1530 aa12.4□□□□□ -0.42
ABCD4-216ENST00000493752 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.43
ABCD4-216ENST00000493752 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
ABCD4-216ENST00000493752 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
ABCD4-216ENST00000493752 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
ABCD4-216ENST00000493752 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
ABCD4-216ENST00000493752 ABCC5O15440 1437 aa12.37□□□□□ -0.43
ABCD4-216ENST00000493752 ARHGEF5Q12774 1597 aa12.36□□□□□ -0.43
ABCD4-216ENST00000493752 ZMYM4Q5VZL5 1548 aa12.36□□□□□ -0.43
ABCD4-216ENST00000493752 KDM5CP41229 1560 aa12.35□□□□□ -0.43
ABCD4-216ENST00000493752 FRMPD1Q5SYB0 1578 aa12.35□□□□□ -0.43
ABCD4-216ENST00000493752 DAPK1P53355 1430 aa12.35□□□□□ -0.43
ABCD4-216ENST00000493752 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
ABCD4-216ENST00000493752 YEATS2Q9ULM3 1422 aa12.34□□□□□ -0.43
ABCD4-216ENST00000493752 RICTORQ6R327 1708 aa12.34□□□□□ -0.43
ABCD4-216ENST00000493752 ITGAEP38570 1179 aa12.33□□□□□ -0.44
ABCD4-216ENST00000493752 C9orf84Q5VXU9 1444 aa12.33□□□□□ -0.44
ABCD4-216ENST00000493752 ATP10AO60312 1499 aa12.33□□□□□ -0.44
ABCD4-216ENST00000493752 ZFYVE16Q7Z3T8 1539 aa12.32□□□□□ -0.44
ABCD4-216ENST00000493752 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
ABCD4-216ENST00000493752 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
ABCD4-216ENST00000493752 SHANK2Q9UPX8 1470 aa12.31□□□□□ -0.44
ABCD4-216ENST00000493752 ANKRD30AQ9BXX3 1397 aa12.3□□□□□ -0.44
ABCD4-216ENST00000493752 ATP7AQ04656 1500 aa12.3□□□□□ -0.44
ABCD4-216ENST00000493752 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
ABCD4-216ENST00000493752 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
ABCD4-216ENST00000493752 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
ABCD4-216ENST00000493752 HECW2Q9P2P5 1572 aa12.29□□□□□ -0.44
ABCD4-216ENST00000493752 ARID4BQ4LE39 1312 aaPredicted RBP12.29□□□□□ -0.44
ABCD4-216ENST00000493752 ROCK1Q13464 1354 aa12.29□□□□□ -0.44
ABCD4-216ENST00000493752 MAST1Q9Y2H9 1570 aa12.28□□□□□ -0.44
ABCD4-216ENST00000493752 KIDINS220Q9ULH0 1771 aa12.27□□□□□ -0.45
ABCD4-216ENST00000493752 KIF15Q9NS87 1388 aa12.27□□□□□ -0.45
ABCD4-216ENST00000493752 ADGRL2O95490 1459 aa12.27□□□□□ -0.45
ABCD4-216ENST00000493752 A2MP01023 1474 aa12.27□□□□□ -0.45
ABCD4-216ENST00000493752 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
ABCD4-216ENST00000493752 ARHGEF40Q8TER5 1519 aa12.26□□□□□ -0.45
ABCD4-216ENST00000493752 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
ABCD4-216ENST00000493752 DIP2CQ9Y2E4 1556 aa12.25□□□□□ -0.45
ABCD4-216ENST00000493752 KIF3BO15066 747 aa12.24□□□□□ -0.45
ABCD4-216ENST00000493752 PPP6R1Q9UPN7 881 aa12.24□□□□□ -0.45
ABCD4-216ENST00000493752 REREQ9P2R6 1566 aa12.23□□□□□ -0.45
ABCD4-216ENST00000493752 AGLP35573 1532 aa12.23□□□□□ -0.45
ABCD4-216ENST00000493752 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
ABCD4-216ENST00000493752 DUOX2Q9NRD8 1548 aa12.22□□□□□ -0.45
ABCD4-216ENST00000493752 MLECQ14165 292 aa12.22□□□□□ -0.45
ABCD4-216ENST00000493752 GGT6Q6P531 493 aa12.22□□□□□ -0.45
ABCD4-216ENST00000493752 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
ABCD4-216ENST00000493752 ANKRD50Q9ULJ7 1429 aa12.21□□□□□ -0.45
ABCD4-216ENST00000493752 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
ABCD4-216ENST00000493752 CROCC2H7BZ55 1655 aa12.2□□□□□ -0.46
ABCD4-216ENST00000493752 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
ABCD4-216ENST00000493752 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
ABCD4-216ENST00000493752 NAIPQ13075 1403 aa12.19□□□□□ -0.46
ABCD4-216ENST00000493752 KDM4FA0A1W2PPD8 638 aa12.18□□□□□ -0.46
ABCD4-216ENST00000493752 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
ABCD4-216ENST00000493752 ACIN1Q9UKV3 1341 aaKnown RBP12.17□□□□□ -0.46
ABCD4-216ENST00000493752 WASHC2CQ9Y4E1 1318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms