RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 CFAP74Q9C0B2 1584 aa16.76■□□□□ 0.27
SOX2-OT-215ENST00000493521 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
SOX2-OT-215ENST00000493521 MYO5CQ9NQX4 1742 aa16.74■□□□□ 0.27
SOX2-OT-215ENST00000493521 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
SOX2-OT-215ENST00000493521 POGZQ7Z3K3 1410 aa16.73■□□□□ 0.27
SOX2-OT-215ENST00000493521 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
SOX2-OT-215ENST00000493521 MLECQ14165 292 aa16.72■□□□□ 0.27
SOX2-OT-215ENST00000493521 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
SOX2-OT-215ENST00000493521 LMTK3Q96Q04 1460 aa16.69■□□□□ 0.26
SOX2-OT-215ENST00000493521 ARHGEF12Q9NZN5 1544 aa16.69■□□□□ 0.26
SOX2-OT-215ENST00000493521 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
SOX2-OT-215ENST00000493521 ARHGAP5Q13017 1502 aa16.67■□□□□ 0.26
SOX2-OT-215ENST00000493521 CASKIN1Q8WXD9 1431 aa16.67■□□□□ 0.26
SOX2-OT-215ENST00000493521 HSPA2P54652 639 aa16.66■□□□□ 0.26
SOX2-OT-215ENST00000493521 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
SOX2-OT-215ENST00000493521 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
SOX2-OT-215ENST00000493521 FER1L4A9Z1Z3 1794 aa16.64■□□□□ 0.25
SOX2-OT-215ENST00000493521 MAGI2Q86UL8 1455 aa16.63■□□□□ 0.25
SOX2-OT-215ENST00000493521 KDM5CP41229 1560 aa16.63■□□□□ 0.25
SOX2-OT-215ENST00000493521 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
SOX2-OT-215ENST00000493521 CDC42BPAQ5VT25 1732 aa16.62■□□□□ 0.25
SOX2-OT-215ENST00000493521 ATP10AO60312 1499 aa16.62■□□□□ 0.25
SOX2-OT-215ENST00000493521 CEBPAP49715 358 aaPredicted RBP16.62■□□□□ 0.25
SOX2-OT-215ENST00000493521 DIP2CQ9Y2E4 1556 aa16.62■□□□□ 0.25
SOX2-OT-215ENST00000493521 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
SOX2-OT-215ENST00000493521 CLIP1P30622 1438 aa16.62■□□□□ 0.25
SOX2-OT-215ENST00000493521 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
SOX2-OT-215ENST00000493521 C9orf84Q5VXU9 1444 aa16.61■□□□□ 0.25
SOX2-OT-215ENST00000493521 ABCC1P33527 1531 aa16.6■□□□□ 0.25
SOX2-OT-215ENST00000493521 ITSN2Q9NZM3 1697 aa16.59■□□□□ 0.25
SOX2-OT-215ENST00000493521 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
SOX2-OT-215ENST00000493521 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
SOX2-OT-215ENST00000493521 FYCO1Q9BQS8 1478 aa16.58■□□□□ 0.24
SOX2-OT-215ENST00000493521 SAMD9LQ8IVG5 1584 aa16.56■□□□□ 0.24
SOX2-OT-215ENST00000493521 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
SOX2-OT-215ENST00000493521 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
SOX2-OT-215ENST00000493521 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
SOX2-OT-215ENST00000493521 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.24
SOX2-OT-215ENST00000493521 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.24
SOX2-OT-215ENST00000493521 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
SOX2-OT-215ENST00000493521 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
SOX2-OT-215ENST00000493521 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
SOX2-OT-215ENST00000493521 REREQ9P2R6 1566 aa16.48■□□□□ 0.23
SOX2-OT-215ENST00000493521 C3P01024 1663 aa16.48■□□□□ 0.23
SOX2-OT-215ENST00000493521 PREX1Q8TCU6 1659 aa16.46■□□□□ 0.23
SOX2-OT-215ENST00000493521 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
SOX2-OT-215ENST00000493521 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
SOX2-OT-215ENST00000493521 STRCQ7RTU9 1775 aa16.45■□□□□ 0.22
SOX2-OT-215ENST00000493521 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
SOX2-OT-215ENST00000493521 FBXO41Q8TF61 875 aa16.44■□□□□ 0.22
SOX2-OT-215ENST00000493521 SUPT6HQ7KZ85 1726 aaKnown RBP16.44■□□□□ 0.22
SOX2-OT-215ENST00000493521 AGLP35573 1532 aa16.44■□□□□ 0.22
SOX2-OT-215ENST00000493521 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
SOX2-OT-215ENST00000493521 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
SOX2-OT-215ENST00000493521 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
SOX2-OT-215ENST00000493521 CCNB3Q8WWL7 1395 aa16.4■□□□□ 0.22
SOX2-OT-215ENST00000493521 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
SOX2-OT-215ENST00000493521 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
SOX2-OT-215ENST00000493521 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
SOX2-OT-215ENST00000493521 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
SOX2-OT-215ENST00000493521 EHBP1L1Q8N3D4 1523 aa16.37■□□□□ 0.21
SOX2-OT-215ENST00000493521 UHRF1BP1Q6BDS2 1440 aa16.36■□□□□ 0.21
SOX2-OT-215ENST00000493521 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
SOX2-OT-215ENST00000493521 CLTCQ00610 1675 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-215ENST00000493521 A2MP01023 1474 aa16.34■□□□□ 0.21
SOX2-OT-215ENST00000493521 CERKQ8TCT0 537 aa16.33■□□□□ 0.2
SOX2-OT-215ENST00000493521 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
SOX2-OT-215ENST00000493521 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-215ENST00000493521 ADGBQ8N7X0 1667 aa16.31■□□□□ 0.2
SOX2-OT-215ENST00000493521 ZMYM3Q14202 1370 aa16.31■□□□□ 0.2
SOX2-OT-215ENST00000493521 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
SOX2-OT-215ENST00000493521 GGT6Q6P531 493 aa16.3■□□□□ 0.2
SOX2-OT-215ENST00000493521 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
SOX2-OT-215ENST00000493521 KANK4Q5T7N3 995 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-215ENST00000493521 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
SOX2-OT-215ENST00000493521 ESF1Q9H501 851 aaKnown RBP16.28■□□□□ 0.2
SOX2-OT-215ENST00000493521 PTPRKQ15262 1439 aa16.27■□□□□ 0.19
SOX2-OT-215ENST00000493521 CNTLNQ9NXG0 1405 aa16.27■□□□□ 0.19
SOX2-OT-215ENST00000493521 CAMSAP1Q5T5Y3 1602 aa16.27■□□□□ 0.19
SOX2-OT-215ENST00000493521 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
SOX2-OT-215ENST00000493521 MYO3AQ8NEV4 1616 aa16.26■□□□□ 0.19
SOX2-OT-215ENST00000493521 NCKAP5LQ9HCH0 1330 aa16.24■□□□□ 0.19
SOX2-OT-215ENST00000493521 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
SOX2-OT-215ENST00000493521 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
SOX2-OT-215ENST00000493521 LRRC9Q6ZRR7 1453 aa16.23■□□□□ 0.19
SOX2-OT-215ENST00000493521 NPATQ14207 1427 aa16.23■□□□□ 0.19
SOX2-OT-215ENST00000493521 CCDC141Q6ZP82 1450 aa16.22■□□□□ 0.19
SOX2-OT-215ENST00000493521 FBXO31Q5XUX0 539 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-215ENST00000493521 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-215ENST00000493521 RTEL1-TNFRSF6BF6WH68 1400 aa16.21■□□□□ 0.19
SOX2-OT-215ENST00000493521 PTPRTO14522 1441 aa16.21■□□□□ 0.19
SOX2-OT-215ENST00000493521 ZNF142P52746 1687 aaPredicted RBP16.21■□□□□ 0.18
SOX2-OT-215ENST00000493521 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-215ENST00000493521 KIF3BO15066 747 aa16.19■□□□□ 0.18
SOX2-OT-215ENST00000493521 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
SOX2-OT-215ENST00000493521 ZNF335Q9H4Z2 1342 aaPredicted RBP16.17■□□□□ 0.18
SOX2-OT-215ENST00000493521 DNMT1P26358 1616 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-215ENST00000493521 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
SOX2-OT-215ENST00000493521 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
SOX2-OT-215ENST00000493521 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms