RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
SOX2-OT-215ENST00000493521 ABCC9O60706 1549 aa23.02■■□□□ 1.28
SOX2-OT-215ENST00000493521 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
SOX2-OT-215ENST00000493521 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
SOX2-OT-215ENST00000493521 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
SOX2-OT-215ENST00000493521 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
SOX2-OT-215ENST00000493521 NACADO15069 1562 aa21.6■■□□□ 1.05
SOX2-OT-215ENST00000493521 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
SOX2-OT-215ENST00000493521 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
SOX2-OT-215ENST00000493521 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
SOX2-OT-215ENST00000493521 MYO15BQ96JP2 1530 aa21.26■□□□□ 0.99
SOX2-OT-215ENST00000493521 ZCCHC6Q5VYS8 1495 aaKnown RBP21.23■□□□□ 0.99
SOX2-OT-215ENST00000493521 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
SOX2-OT-215ENST00000493521 SCRIBQ14160 1630 aa21■□□□□ 0.95
SOX2-OT-215ENST00000493521 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
SOX2-OT-215ENST00000493521 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
SOX2-OT-215ENST00000493521 EIF4G1Q04637 1599 aaKnown RBP20.69■□□□□ 0.9
SOX2-OT-215ENST00000493521 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
SOX2-OT-215ENST00000493521 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
SOX2-OT-215ENST00000493521 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
SOX2-OT-215ENST00000493521 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
SOX2-OT-215ENST00000493521 NESP48681 1621 aa19.84■□□□□ 0.77
SOX2-OT-215ENST00000493521 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
SOX2-OT-215ENST00000493521 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
SOX2-OT-215ENST00000493521 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
SOX2-OT-215ENST00000493521 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
SOX2-OT-215ENST00000493521 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
SOX2-OT-215ENST00000493521 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
SOX2-OT-215ENST00000493521 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
SOX2-OT-215ENST00000493521 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
SOX2-OT-215ENST00000493521 CUX2O14529 1486 aa19.66■□□□□ 0.74
SOX2-OT-215ENST00000493521 WIZO95785 1651 aa19.59■□□□□ 0.73
SOX2-OT-215ENST00000493521 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
SOX2-OT-215ENST00000493521 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
SOX2-OT-215ENST00000493521 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
SOX2-OT-215ENST00000493521 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
SOX2-OT-215ENST00000493521 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
SOX2-OT-215ENST00000493521 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
SOX2-OT-215ENST00000493521 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
SOX2-OT-215ENST00000493521 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
SOX2-OT-215ENST00000493521 WDR62O43379 1518 aa19.23■□□□□ 0.67
SOX2-OT-215ENST00000493521 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
SOX2-OT-215ENST00000493521 CFTRP13569 1480 aa19.19■□□□□ 0.66
SOX2-OT-215ENST00000493521 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
SOX2-OT-215ENST00000493521 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
SOX2-OT-215ENST00000493521 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
SOX2-OT-215ENST00000493521 PRDM2Q13029 1718 aa18.98■□□□□ 0.63
SOX2-OT-215ENST00000493521 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
SOX2-OT-215ENST00000493521 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
SOX2-OT-215ENST00000493521 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
SOX2-OT-215ENST00000493521 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
SOX2-OT-215ENST00000493521 IFT140Q96RY7 1462 aa18.77■□□□□ 0.59
SOX2-OT-215ENST00000493521 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
SOX2-OT-215ENST00000493521 EIF4G3O43432 1585 aaKnown RBP18.73■□□□□ 0.59
SOX2-OT-215ENST00000493521 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.596e-18■■■■□ 26.1
SOX2-OT-215ENST00000493521 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
SOX2-OT-215ENST00000493521 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
SOX2-OT-215ENST00000493521 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
SOX2-OT-215ENST00000493521 RIMBP3CA6NJZ7 1639 aa18.65■□□□□ 0.58
SOX2-OT-215ENST00000493521 RIMBP3BA6NNM3 1639 aa18.65■□□□□ 0.58
SOX2-OT-215ENST00000493521 RIMBP3Q9UFD9 1639 aa18.65■□□□□ 0.58
SOX2-OT-215ENST00000493521 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
SOX2-OT-215ENST00000493521 CHD1O14646 1710 aa18.61■□□□□ 0.57
SOX2-OT-215ENST00000493521 CUX1P39880 1505 aa18.6■□□□□ 0.57
SOX2-OT-215ENST00000493521 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.57
SOX2-OT-215ENST00000493521 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.56
SOX2-OT-215ENST00000493521 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
SOX2-OT-215ENST00000493521 ARHGEF11O15085 1522 aa18.57■□□□□ 0.56
SOX2-OT-215ENST00000493521 SOGA1O94964 1423 aa18.55■□□□□ 0.56
SOX2-OT-215ENST00000493521 FBLN2P98095 1184 aa18.51■□□□□ 0.55
SOX2-OT-215ENST00000493521 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
SOX2-OT-215ENST00000493521 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
SOX2-OT-215ENST00000493521 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
SOX2-OT-215ENST00000493521 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
SOX2-OT-215ENST00000493521 CLASP1Q7Z460 1538 aa18.37■□□□□ 0.53
SOX2-OT-215ENST00000493521 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
SOX2-OT-215ENST00000493521 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
SOX2-OT-215ENST00000493521 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
SOX2-OT-215ENST00000493521 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
SOX2-OT-215ENST00000493521 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
SOX2-OT-215ENST00000493521 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
SOX2-OT-215ENST00000493521 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
SOX2-OT-215ENST00000493521 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
SOX2-OT-215ENST00000493521 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
SOX2-OT-215ENST00000493521 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
SOX2-OT-215ENST00000493521 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
SOX2-OT-215ENST00000493521 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
SOX2-OT-215ENST00000493521 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
SOX2-OT-215ENST00000493521 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
SOX2-OT-215ENST00000493521 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
SOX2-OT-215ENST00000493521 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
SOX2-OT-215ENST00000493521 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
SOX2-OT-215ENST00000493521 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
SOX2-OT-215ENST00000493521 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
SOX2-OT-215ENST00000493521 NUP160Q12769 1436 aa18.1■□□□□ 0.49
SOX2-OT-215ENST00000493521 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
SOX2-OT-215ENST00000493521 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
SOX2-OT-215ENST00000493521 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
SOX2-OT-215ENST00000493521 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
SOX2-OT-215ENST00000493521 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms