RNA–Protein interactions for RNA: ENST00000493378.1

ARF4-207, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-207ENST00000493378 EFCAB2Q5VUJ9 269 aa16.91■□□□□ 0.3
ARF4-207ENST00000493378 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
ARF4-207ENST00000493378 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
ARF4-207ENST00000493378 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
ARF4-207ENST00000493378 COL17A1Q9UMD9 1497 aaPredicted RBP16.9■□□□□ 0.3
ARF4-207ENST00000493378 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
ARF4-207ENST00000493378 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
ARF4-207ENST00000493378 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
ARF4-207ENST00000493378 ADGRL1O94910 1474 aa16.86■□□□□ 0.29
ARF4-207ENST00000493378 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
ARF4-207ENST00000493378 PLEKHH2Q8IVE3 1493 aa16.85■□□□□ 0.29
ARF4-207ENST00000493378 ABCC1P33527 1531 aa16.85■□□□□ 0.29
ARF4-207ENST00000493378 FRMPD1Q5SYB0 1578 aa16.83■□□□□ 0.28
ARF4-207ENST00000493378 POGZQ7Z3K3 1410 aa16.83■□□□□ 0.28
ARF4-207ENST00000493378 CFDP1Q9UEE9 299 aaPredicted RBP16.83■□□□□ 0.28
ARF4-207ENST00000493378 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.28
ARF4-207ENST00000493378 SAMD9LQ8IVG5 1584 aa16.82■□□□□ 0.28
ARF4-207ENST00000493378 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
ARF4-207ENST00000493378 MIA2Q96PC5 1412 aa16.82■□□□□ 0.28
ARF4-207ENST00000493378 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
ARF4-207ENST00000493378 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
ARF4-207ENST00000493378 RICTORQ6R327 1708 aa16.81■□□□□ 0.28
ARF4-207ENST00000493378 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
ARF4-207ENST00000493378 KDM5CP41229 1560 aa16.79■□□□□ 0.28
ARF4-207ENST00000493378 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
ARF4-207ENST00000493378 ARHGEF12Q9NZN5 1544 aa16.77■□□□□ 0.28
ARF4-207ENST00000493378 RAPGEF3O95398 923 aa16.76■□□□□ 0.27
ARF4-207ENST00000493378 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
ARF4-207ENST00000493378 CAMSAP2Q08AD1 1489 aa16.75■□□□□ 0.27
ARF4-207ENST00000493378 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
ARF4-207ENST00000493378 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
ARF4-207ENST00000493378 FGD6Q6ZV73 1430 aa16.73■□□□□ 0.27
ARF4-207ENST00000493378 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
ARF4-207ENST00000493378 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
ARF4-207ENST00000493378 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
ARF4-207ENST00000493378 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
ARF4-207ENST00000493378 ARHGEF40Q8TER5 1519 aa16.72■□□□□ 0.27
ARF4-207ENST00000493378 RSPH4AQ5TD94 716 aa16.72■□□□□ 0.27
ARF4-207ENST00000493378 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
ARF4-207ENST00000493378 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
ARF4-207ENST00000493378 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
ARF4-207ENST00000493378 CCDC141Q6ZP82 1450 aa16.7■□□□□ 0.26
ARF4-207ENST00000493378 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
ARF4-207ENST00000493378 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
ARF4-207ENST00000493378 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
ARF4-207ENST00000493378 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
ARF4-207ENST00000493378 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
ARF4-207ENST00000493378 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
ARF4-207ENST00000493378 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
ARF4-207ENST00000493378 YEATS2Q9ULM3 1422 aa16.65■□□□□ 0.26
ARF4-207ENST00000493378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.26
ARF4-207ENST00000493378 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
ARF4-207ENST00000493378 ATP7AQ04656 1500 aa16.64■□□□□ 0.25
ARF4-207ENST00000493378 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
ARF4-207ENST00000493378 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
ARF4-207ENST00000493378 ATP10AO60312 1499 aa16.63■□□□□ 0.25
ARF4-207ENST00000493378 KIDINS220Q9ULH0 1771 aa16.63■□□□□ 0.25
ARF4-207ENST00000493378 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
ARF4-207ENST00000493378 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
ARF4-207ENST00000493378 DNMT1P26358 1616 aaKnown RBP16.61■□□□□ 0.25
ARF4-207ENST00000493378 ABCA6Q8N139 1617 aa16.61■□□□□ 0.25
ARF4-207ENST00000493378 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
ARF4-207ENST00000493378 ABCC5O15440 1437 aa16.6■□□□□ 0.25
ARF4-207ENST00000493378 DAPK1P53355 1430 aa16.59■□□□□ 0.25
ARF4-207ENST00000493378 CROCC2H7BZ55 1655 aa16.59■□□□□ 0.25
ARF4-207ENST00000493378 TSPY4P0CV99 314 aa16.58■□□□□ 0.24
ARF4-207ENST00000493378 TSPY10P0CW01 314 aa16.58■□□□□ 0.24
ARF4-207ENST00000493378 AGLP35573 1532 aa16.58■□□□□ 0.24
ARF4-207ENST00000493378 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
ARF4-207ENST00000493378 PPARGC1BQ86YN6 1023 aaKnown RBP16.56■□□□□ 0.24
ARF4-207ENST00000493378 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
ARF4-207ENST00000493378 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
ARF4-207ENST00000493378 A2MP01023 1474 aa16.54■□□□□ 0.24
ARF4-207ENST00000493378 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
ARF4-207ENST00000493378 FAM50AQ14320 339 aaKnown RBP16.52■□□□□ 0.24
ARF4-207ENST00000493378 SIGLEC1Q9BZZ2 1709 aa16.52■□□□□ 0.24
ARF4-207ENST00000493378 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
ARF4-207ENST00000493378 BCORL1Q5H9F3 1711 aa16.5■□□□□ 0.23
ARF4-207ENST00000493378 DUOX2Q9NRD8 1548 aa16.49■□□□□ 0.23
ARF4-207ENST00000493378 ROCK1Q13464 1354 aa16.49■□□□□ 0.23
ARF4-207ENST00000493378 ANKRD30AQ9BXX3 1397 aa16.49■□□□□ 0.23
ARF4-207ENST00000493378 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
ARF4-207ENST00000493378 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
ARF4-207ENST00000493378 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
ARF4-207ENST00000493378 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
ARF4-207ENST00000493378 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
ARF4-207ENST00000493378 PTPRKQ15262 1439 aa16.46■□□□□ 0.23
ARF4-207ENST00000493378 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
ARF4-207ENST00000493378 KDM4FA0A1W2PPD8 638 aa16.45■□□□□ 0.22
ARF4-207ENST00000493378 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
ARF4-207ENST00000493378 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
ARF4-207ENST00000493378 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
ARF4-207ENST00000493378 MADDQ8WXG6 1647 aa16.41■□□□□ 0.22
ARF4-207ENST00000493378 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
ARF4-207ENST00000493378 RRP7BPQ9NSQ0 103 aa16.39■□□□□ 0.21
ARF4-207ENST00000493378 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.21
ARF4-207ENST00000493378 FER1L4A9Z1Z3 1794 aa16.38■□□□□ 0.21
ARF4-207ENST00000493378 ANKRD50Q9ULJ7 1429 aa16.37■□□□□ 0.21
ARF4-207ENST00000493378 DEPDC5O75140 1603 aa16.37■□□□□ 0.21
ARF4-207ENST00000493378 PTPRMP28827 1452 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms