RNA–Protein interactions for RNA: ENST00000493378.1

ARF4-207, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-207ENST00000493378 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
ARF4-207ENST00000493378 CCDC180Q9P1Z9 1646 aa23.1■■□□□ 1.29
ARF4-207ENST00000493378 ABCC9O60706 1549 aa22.3■■□□□ 1.16
ARF4-207ENST00000493378 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
ARF4-207ENST00000493378 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
ARF4-207ENST00000493378 NACADO15069 1562 aa21.67■■□□□ 1.06
ARF4-207ENST00000493378 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
ARF4-207ENST00000493378 RB1CC1Q8TDY2 1594 aa21.62■■□□□ 1.05
ARF4-207ENST00000493378 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
ARF4-207ENST00000493378 UNC13AQ9UPW8 1703 aa21.06■□□□□ 0.96
ARF4-207ENST00000493378 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
ARF4-207ENST00000493378 BICRAQ9NZM4 1560 aa20.94■□□□□ 0.94
ARF4-207ENST00000493378 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.94
ARF4-207ENST00000493378 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
ARF4-207ENST00000493378 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
ARF4-207ENST00000493378 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
ARF4-207ENST00000493378 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
ARF4-207ENST00000493378 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
ARF4-207ENST00000493378 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
ARF4-207ENST00000493378 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
ARF4-207ENST00000493378 PEG3Q9GZU2 1588 aa20.02■□□□□ 0.8
ARF4-207ENST00000493378 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
ARF4-207ENST00000493378 SMARCA2P51531 1590 aa20■□□□□ 0.79
ARF4-207ENST00000493378 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
ARF4-207ENST00000493378 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
ARF4-207ENST00000493378 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
ARF4-207ENST00000493378 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
ARF4-207ENST00000493378 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
ARF4-207ENST00000493378 WIZO95785 1651 aa19.77■□□□□ 0.76
ARF4-207ENST00000493378 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
ARF4-207ENST00000493378 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
ARF4-207ENST00000493378 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
ARF4-207ENST00000493378 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
ARF4-207ENST00000493378 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
ARF4-207ENST00000493378 NESP48681 1621 aa19.34■□□□□ 0.69
ARF4-207ENST00000493378 CFTRP13569 1480 aa19.33■□□□□ 0.68
ARF4-207ENST00000493378 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
ARF4-207ENST00000493378 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
ARF4-207ENST00000493378 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
ARF4-207ENST00000493378 FANCD2Q9BXW9 1451 aa19.15■□□□□ 0.66
ARF4-207ENST00000493378 KIF21AQ7Z4S6 1674 aa19.13■□□□□ 0.65
ARF4-207ENST00000493378 CEP164Q9UPV0 1460 aa19.11■□□□□ 0.65
ARF4-207ENST00000493378 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
ARF4-207ENST00000493378 CUX2O14529 1486 aa19.06■□□□□ 0.64
ARF4-207ENST00000493378 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
ARF4-207ENST00000493378 WDR62O43379 1518 aa19.02■□□□□ 0.64
ARF4-207ENST00000493378 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
ARF4-207ENST00000493378 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
ARF4-207ENST00000493378 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
ARF4-207ENST00000493378 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
ARF4-207ENST00000493378 CUX1P39880 1505 aa18.77■□□□□ 0.6
ARF4-207ENST00000493378 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
ARF4-207ENST00000493378 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
ARF4-207ENST00000493378 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
ARF4-207ENST00000493378 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
ARF4-207ENST00000493378 BIVM-ERCC5R4GMW8 1640 aa18.69■□□□□ 0.58
ARF4-207ENST00000493378 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
ARF4-207ENST00000493378 SYNJ1O43426 1573 aa18.65■□□□□ 0.58
ARF4-207ENST00000493378 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
ARF4-207ENST00000493378 SOGA1O94964 1423 aa18.62■□□□□ 0.57
ARF4-207ENST00000493378 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
ARF4-207ENST00000493378 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
ARF4-207ENST00000493378 ABCA10Q8WWZ4 1543 aa18.56■□□□□ 0.56
ARF4-207ENST00000493378 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
ARF4-207ENST00000493378 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
ARF4-207ENST00000493378 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.55
ARF4-207ENST00000493378 ABCA5Q8WWZ7 1642 aa18.46■□□□□ 0.55
ARF4-207ENST00000493378 TDRD9Q8NDG6 1382 aaKnown RBP18.45■□□□□ 0.54
ARF4-207ENST00000493378 GRIN2BQ13224 1484 aa18.42■□□□□ 0.54
ARF4-207ENST00000493378 GAPVD1Q14C86 1478 aa18.42■□□□□ 0.54
ARF4-207ENST00000493378 MAGI1Q96QZ7 1491 aaPredicted RBP18.38■□□□□ 0.53
ARF4-207ENST00000493378 PBRM1Q86U86 1689 aa18.35■□□□□ 0.53
ARF4-207ENST00000493378 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
ARF4-207ENST00000493378 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
ARF4-207ENST00000493378 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
ARF4-207ENST00000493378 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
ARF4-207ENST00000493378 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
ARF4-207ENST00000493378 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
ARF4-207ENST00000493378 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
ARF4-207ENST00000493378 IGF1RP08069 1367 aa18.22■□□□□ 0.51
ARF4-207ENST00000493378 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
ARF4-207ENST00000493378 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
ARF4-207ENST00000493378 CHD1O14646 1710 aa18.21■□□□□ 0.51
ARF4-207ENST00000493378 CUL7Q14999 1698 aa18.2■□□□□ 0.5
ARF4-207ENST00000493378 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
ARF4-207ENST00000493378 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
ARF4-207ENST00000493378 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
ARF4-207ENST00000493378 EEA1Q15075 1411 aa18.15■□□□□ 0.5
ARF4-207ENST00000493378 FBLN2P98095 1184 aa18.14■□□□□ 0.49
ARF4-207ENST00000493378 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
ARF4-207ENST00000493378 NUP160Q12769 1436 aa18.12■□□□□ 0.49
ARF4-207ENST00000493378 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
ARF4-207ENST00000493378 CLASP1Q7Z460 1538 aa18.1■□□□□ 0.49
ARF4-207ENST00000493378 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
ARF4-207ENST00000493378 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
ARF4-207ENST00000493378 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
ARF4-207ENST00000493378 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
ARF4-207ENST00000493378 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
ARF4-207ENST00000493378 SHROOM2Q13796 1616 aa17.95■□□□□ 0.46
ARF4-207ENST00000493378 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms