RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
PDLIM1-204ENST00000492511 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
PDLIM1-204ENST00000492511 CFAP74Q9C0B2 1584 aa11.41□□□□□ -0.58
PDLIM1-204ENST00000492511 HECW2Q9P2P5 1572 aa11.41□□□□□ -0.58
PDLIM1-204ENST00000492511 MYO5CQ9NQX4 1742 aa11.41□□□□□ -0.58
PDLIM1-204ENST00000492511 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
PDLIM1-204ENST00000492511 POGZQ7Z3K3 1410 aa11.41□□□□□ -0.58
PDLIM1-204ENST00000492511 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.58
PDLIM1-204ENST00000492511 RICTORQ6R327 1708 aa11.4□□□□□ -0.58
PDLIM1-204ENST00000492511 CDC42BPBQ9Y5S2 1711 aa11.4□□□□□ -0.58
PDLIM1-204ENST00000492511 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
PDLIM1-204ENST00000492511 EHBP1L1Q8N3D4 1523 aa11.39□□□□□ -0.59
PDLIM1-204ENST00000492511 CCNB3Q8WWL7 1395 aa11.39□□□□□ -0.59
PDLIM1-204ENST00000492511 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 YEATS2Q9ULM3 1422 aa11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 TRAPPC8Q9Y2L5 1435 aa11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 CFDP1Q9UEE9 299 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 ZNF777Q9ULD5 760 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 ZMYM4Q5VZL5 1548 aa11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 LRRC9Q6ZRR7 1453 aa11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 CDC42BPAQ5VT25 1732 aa11.38□□□□□ -0.59
PDLIM1-204ENST00000492511 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1-204ENST00000492511 MAP3K1Q13233 1512 aa11.37□□□□□ -0.59
PDLIM1-204ENST00000492511 ABCC1P33527 1531 aa11.36□□□□□ -0.59
PDLIM1-204ENST00000492511 HNRNPMP52272 730 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDLIM1-204ENST00000492511 NCOA2Q15596 1464 aa11.36□□□□□ -0.59
PDLIM1-204ENST00000492511 MAGI2Q86UL8 1455 aa11.36□□□□□ -0.59
PDLIM1-204ENST00000492511 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
PDLIM1-204ENST00000492511 SAMD9LQ8IVG5 1584 aa11.35□□□□□ -0.59
PDLIM1-204ENST00000492511 KDM5CP41229 1560 aa11.34□□□□□ -0.59
PDLIM1-204ENST00000492511 ZFYVE16Q7Z3T8 1539 aa11.34□□□□□ -0.59
PDLIM1-204ENST00000492511 ARHGEF40Q8TER5 1519 aa11.34□□□□□ -0.59
PDLIM1-204ENST00000492511 KIAA1107Q9UPP5 1409 aa11.34□□□□□ -0.59
PDLIM1-204ENST00000492511 MLH3Q9UHC1 1453 aa11.32□□□□□ -0.6
PDLIM1-204ENST00000492511 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1-204ENST00000492511 ATP10AO60312 1499 aa11.32□□□□□ -0.6
PDLIM1-204ENST00000492511 MBD5Q9P267 1494 aa11.32□□□□□ -0.6
PDLIM1-204ENST00000492511 SYCP2Q9BX26 1530 aa11.31□□□□□ -0.6
PDLIM1-204ENST00000492511 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
PDLIM1-204ENST00000492511 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
PDLIM1-204ENST00000492511 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
PDLIM1-204ENST00000492511 PLEKHH2Q8IVE3 1493 aa11.3□□□□□ -0.6
PDLIM1-204ENST00000492511 APLP2Q06481 763 aa11.29□□□□□ -0.6
PDLIM1-204ENST00000492511 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
PDLIM1-204ENST00000492511 MYT1LQ9UL68 1186 aa11.28□□□□□ -0.6
PDLIM1-204ENST00000492511 SPAG9O60271 1321 aaKnown RBP11.28□□□□□ -0.6
PDLIM1-204ENST00000492511 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
PDLIM1-204ENST00000492511 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.6
PDLIM1-204ENST00000492511 BCORL1Q5H9F3 1711 aa11.26□□□□□ -0.61
PDLIM1-204ENST00000492511 KIDINS220Q9ULH0 1771 aa11.26□□□□□ -0.61
PDLIM1-204ENST00000492511 MLECQ14165 292 aa11.26□□□□□ -0.61
PDLIM1-204ENST00000492511 ABCA6Q8N139 1617 aa11.26□□□□□ -0.61
PDLIM1-204ENST00000492511 MYOM3Q5VTT5 1437 aa11.26□□□□□ -0.61
PDLIM1-204ENST00000492511 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
PDLIM1-204ENST00000492511 FBXO41Q8TF61 875 aa11.25□□□□□ -0.61
PDLIM1-204ENST00000492511 MIA2Q96PC5 1412 aa11.25□□□□□ -0.61
PDLIM1-204ENST00000492511 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
PDLIM1-204ENST00000492511 PTPRMP28827 1452 aa11.24□□□□□ -0.61
PDLIM1-204ENST00000492511 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
PDLIM1-204ENST00000492511 RTEL1-TNFRSF6BF6WH68 1400 aa11.23□□□□□ -0.61
PDLIM1-204ENST00000492511 ATP7AQ04656 1500 aa11.23□□□□□ -0.61
PDLIM1-204ENST00000492511 MADDQ8WXG6 1647 aa11.23□□□□□ -0.61
PDLIM1-204ENST00000492511 AGLP35573 1532 aa11.22□□□□□ -0.61
PDLIM1-204ENST00000492511 CCDC141Q6ZP82 1450 aa11.22□□□□□ -0.61
PDLIM1-204ENST00000492511 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1-204ENST00000492511 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
PDLIM1-204ENST00000492511 A2MP01023 1474 aa11.19□□□□□ -0.62
PDLIM1-204ENST00000492511 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
PDLIM1-204ENST00000492511 TSPY4P0CV99 314 aa11.19□□□□□ -0.62
PDLIM1-204ENST00000492511 TSPY10P0CW01 314 aa11.19□□□□□ -0.62
PDLIM1-204ENST00000492511 PPARGC1BQ86YN6 1023 aaKnown RBP11.19□□□□□ -0.62
PDLIM1-204ENST00000492511 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
PDLIM1-204ENST00000492511 CEBPAP49715 358 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1-204ENST00000492511 PLXNC1O60486 1568 aa11.18□□□□□ -0.62
PDLIM1-204ENST00000492511 TCOF1Q13428 1488 aaKnown RBP11.18□□□□□ -0.62
PDLIM1-204ENST00000492511 ABCC5O15440 1437 aa11.18□□□□□ -0.62
PDLIM1-204ENST00000492511 RIMS1Q86UR5 1692 aaKnown RBP11.17□□□□□ -0.62
PDLIM1-204ENST00000492511 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
PDLIM1-204ENST00000492511 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
PDLIM1-204ENST00000492511 MAST1Q9Y2H9 1570 aa11.15□□□□□ -0.62
PDLIM1-204ENST00000492511 GGT6Q6P531 493 aa11.14□□□□□ -0.63
PDLIM1-204ENST00000492511 DAPK1P53355 1430 aa11.14□□□□□ -0.63
PDLIM1-204ENST00000492511 KIF3BO15066 747 aa11.13□□□□□ -0.63
PDLIM1-204ENST00000492511 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
PDLIM1-204ENST00000492511 ADGBQ8N7X0 1667 aa11.12□□□□□ -0.63
PDLIM1-204ENST00000492511 FAM50AQ14320 339 aaKnown RBP11.12□□□□□ -0.63
PDLIM1-204ENST00000492511 CHIC2Q9UKJ5 165 aa11.12□□□□□ -0.63
PDLIM1-204ENST00000492511 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
PDLIM1-204ENST00000492511 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
PDLIM1-204ENST00000492511 RRP7BPQ9NSQ0 103 aa11.11□□□□□ -0.63
PDLIM1-204ENST00000492511 ZMYM3Q14202 1370 aa11.11□□□□□ -0.63
PDLIM1-204ENST00000492511 SHANK2Q9UPX8 1470 aa11.11□□□□□ -0.63
PDLIM1-204ENST00000492511 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
PDLIM1-204ENST00000492511 CNTLNQ9NXG0 1405 aa11.1□□□□□ -0.63
PDLIM1-204ENST00000492511 DNMT1P26358 1616 aaKnown RBP11.1□□□□□ -0.63
PDLIM1-204ENST00000492511 LMTK3Q96Q04 1460 aa11.1□□□□□ -0.63
PDLIM1-204ENST00000492511 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
PDLIM1-204ENST00000492511 KIF15Q9NS87 1388 aa11.08□□□□□ -0.64
PDLIM1-204ENST00000492511 HSPA2P54652 639 aa11.08□□□□□ -0.64
PDLIM1-204ENST00000492511 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms