RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
SEMA4D-220ENST00000492386 BCANQ96GW7 911 aa22.57■■□□□ 1.2
SEMA4D-220ENST00000492386 L3MBTL2Q969R5 705 aa22.56■■□□□ 1.2
SEMA4D-220ENST00000492386 FOXD1Q16676 465 aa22.56■■□□□ 1.2
SEMA4D-220ENST00000492386 ANKRD30BQ9BXX2 1392 aa22.56■■□□□ 1.2
SEMA4D-220ENST00000492386 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
SEMA4D-220ENST00000492386 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
SEMA4D-220ENST00000492386 EIF4G2P78344 907 aaKnown RBP eCLIP22.54■■□□□ 1.2
SEMA4D-220ENST00000492386 TEX14Q8IWB6 1497 aa22.52■■□□□ 1.2
SEMA4D-220ENST00000492386 NEFLP07196 543 aa22.5■■□□□ 1.19
SEMA4D-220ENST00000492386 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
SEMA4D-220ENST00000492386 CNTLNQ9NXG0 1405 aa22.49■■□□□ 1.19
SEMA4D-220ENST00000492386 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
SEMA4D-220ENST00000492386 NCOA1Q15788 1441 aa22.48■■□□□ 1.19
SEMA4D-220ENST00000492386 ITSN2Q9NZM3 1697 aa22.48■■□□□ 1.19
SEMA4D-220ENST00000492386 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
SEMA4D-220ENST00000492386 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
SEMA4D-220ENST00000492386 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
SEMA4D-220ENST00000492386 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
SEMA4D-220ENST00000492386 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
SEMA4D-220ENST00000492386 ADGBQ8N7X0 1667 aa22.46■■□□□ 1.19
SEMA4D-220ENST00000492386 NBPF8Q3BBV2 869 aa22.45■■□□□ 1.18
SEMA4D-220ENST00000492386 C11orf95C9JLR9 678 aaPredicted RBP22.45■■□□□ 1.18
SEMA4D-220ENST00000492386 CCDC7Q96M83 1385 aa22.44■■□□□ 1.18
SEMA4D-220ENST00000492386 PZPP20742 1482 aa22.44■■□□□ 1.18
SEMA4D-220ENST00000492386 PLB1Q6P1J6 1458 aa22.43■■□□□ 1.18
SEMA4D-220ENST00000492386 KIF14Q15058 1648 aa22.43■■□□□ 1.18
SEMA4D-220ENST00000492386 SLC4A1APQ9BWU0 796 aaKnown RBP22.43■■□□□ 1.18
SEMA4D-220ENST00000492386 POLR1AO95602 1720 aaPredicted RBP22.43■■□□□ 1.18
SEMA4D-220ENST00000492386 GPATCH8Q9UKJ3 1502 aaKnown RBP22.42■■□□□ 1.18
SEMA4D-220ENST00000492386 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
SEMA4D-220ENST00000492386 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
SEMA4D-220ENST00000492386 HNRNPUQ00839 825 aaKnown RBP eCLIP22.41■■□□□ 1.18
SEMA4D-220ENST00000492386 SPATA31E1Q6ZUB1 1445 aa22.41■■□□□ 1.18
SEMA4D-220ENST00000492386 CFDP1Q9UEE9 299 aaPredicted RBP22.39■■□□□ 1.17
SEMA4D-220ENST00000492386 ADGRL2O95490 1459 aa22.39■■□□□ 1.17
SEMA4D-220ENST00000492386 CHMP7Q8WUX9 453 aaPredicted RBP22.36■■□□□ 1.17
SEMA4D-220ENST00000492386 CCDC184Q52MB2 194 aa22.35■■□□□ 1.17
SEMA4D-220ENST00000492386 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
SEMA4D-220ENST00000492386 PRKRIP1Q9H875 184 aaPredicted RBP22.34■■□□□ 1.17
SEMA4D-220ENST00000492386 NUP160Q12769 1436 aa22.34■■□□□ 1.17
SEMA4D-220ENST00000492386 MBD5Q9P267 1494 aa22.34■■□□□ 1.17
SEMA4D-220ENST00000492386 CARMIL2Q6F5E8 1435 aa22.33■■□□□ 1.16
SEMA4D-220ENST00000492386 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
SEMA4D-220ENST00000492386 KIAA1107Q9UPP5 1409 aa22.32■■□□□ 1.16
SEMA4D-220ENST00000492386 CDC42BPAQ5VT25 1732 aa22.3■■□□□ 1.16
SEMA4D-220ENST00000492386 ZNF777Q9ULD5 760 aaPredicted RBP22.29■■□□□ 1.16
SEMA4D-220ENST00000492386 JPH4Q96JJ6 628 aa22.28■■□□□ 1.16
SEMA4D-220ENST00000492386 ANKRD30AQ9BXX3 1397 aa22.28■■□□□ 1.16
SEMA4D-220ENST00000492386 ABCA8O94911 1581 aa22.28■■□□□ 1.16
SEMA4D-220ENST00000492386 FBLN2P98095 1184 aa22.26■■□□□ 1.15
SEMA4D-220ENST00000492386 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
SEMA4D-220ENST00000492386 ANKRD50Q9ULJ7 1429 aa22.24■■□□□ 1.15
SEMA4D-220ENST00000492386 SHANK2Q9UPX8 1470 aa22.23■■□□□ 1.15
SEMA4D-220ENST00000492386 PKD2Q13563 968 aa22.23■■□□□ 1.15
SEMA4D-220ENST00000492386 BCORL1Q5H9F3 1711 aa22.23■■□□□ 1.15
SEMA4D-220ENST00000492386 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
SEMA4D-220ENST00000492386 ATP10BO94823 1461 aa22.22■■□□□ 1.15
SEMA4D-220ENST00000492386 RBM19Q9Y4C8 960 aaKnown RBP22.2■■□□□ 1.14
SEMA4D-220ENST00000492386 KDM5CP41229 1560 aa22.19■■□□□ 1.14
SEMA4D-220ENST00000492386 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
SEMA4D-220ENST00000492386 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
SEMA4D-220ENST00000492386 C9orf84Q5VXU9 1444 aa22.19■■□□□ 1.14
SEMA4D-220ENST00000492386 USP47Q96K76 1375 aa22.19■■□□□ 1.14
SEMA4D-220ENST00000492386 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
SEMA4D-220ENST00000492386 KDM5DQ9BY66 1539 aa22.17■■□□□ 1.14
SEMA4D-220ENST00000492386 ZBED9Q6R2W3 1325 aa22.17■■□□□ 1.14
SEMA4D-220ENST00000492386 DHX29Q7Z478 1369 aaKnown RBP22.17■■□□□ 1.14
SEMA4D-220ENST00000492386 UHRF1BP1Q6BDS2 1440 aa22.16■■□□□ 1.14
SEMA4D-220ENST00000492386 ANP32EQ9BTT0 268 aa22.14■■□□□ 1.14
SEMA4D-220ENST00000492386 ERICH6BQ5W0A0 696 aa22.14■■□□□ 1.13
SEMA4D-220ENST00000492386 NUP155O75694 1391 aa22.14■■□□□ 1.13
SEMA4D-220ENST00000492386 ARHGEF12Q9NZN5 1544 aa22.13■■□□□ 1.13
SEMA4D-220ENST00000492386 RALGAPBQ86X10 1494 aa22.13■■□□□ 1.13
SEMA4D-220ENST00000492386 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
SEMA4D-220ENST00000492386 ZNF326Q5BKZ1 582 aaKnown RBP22.12■■□□□ 1.13
SEMA4D-220ENST00000492386 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
SEMA4D-220ENST00000492386 PTPRGP23470 1445 aa22.1■■□□□ 1.13
SEMA4D-220ENST00000492386 KIF15Q9NS87 1388 aa22.07■■□□□ 1.12
SEMA4D-220ENST00000492386 TSPY4P0CV99 314 aa22.07■■□□□ 1.12
SEMA4D-220ENST00000492386 TSPY10P0CW01 314 aa22.07■■□□□ 1.12
SEMA4D-220ENST00000492386 CDC42BPBQ9Y5S2 1711 aa22.06■■□□□ 1.12
SEMA4D-220ENST00000492386 SAMD9LQ8IVG5 1584 aa22.05■■□□□ 1.12
SEMA4D-220ENST00000492386 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
SEMA4D-220ENST00000492386 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
SEMA4D-220ENST00000492386 PREX2Q70Z35 1606 aa22.04■■□□□ 1.12
SEMA4D-220ENST00000492386 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.11
SEMA4D-220ENST00000492386 CCDC141Q6ZP82 1450 aa22.01■■□□□ 1.11
SEMA4D-220ENST00000492386 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
SEMA4D-220ENST00000492386 CARD11Q9BXL7 1154 aa22.01■■□□□ 1.11
SEMA4D-220ENST00000492386 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
SEMA4D-220ENST00000492386 SMG6Q86US8 1419 aaKnown RBP21.98■■□□□ 1.11
SEMA4D-220ENST00000492386 E9PCH4 1651 aa21.95■■□□□ 1.1
SEMA4D-220ENST00000492386 CNGB1Q14028 1251 aaPredicted RBP21.95■■□□□ 1.1
SEMA4D-220ENST00000492386 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
SEMA4D-220ENST00000492386 DCAF11Q8TEB1 546 aa21.95■■□□□ 1.1
SEMA4D-220ENST00000492386 ST20-MTHFSA0A0A6YYL1 179 aa21.94■■□□□ 1.1
SEMA4D-220ENST00000492386 MAST1Q9Y2H9 1570 aa21.93■■□□□ 1.1
SEMA4D-220ENST00000492386 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
SEMA4D-220ENST00000492386 UNC13BO14795 1591 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms