RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 SCAPERQ9BY12 1400 aa29.5■■■□□ 2.31
NDUFB4-204ENST00000491335 CDC42BPBQ9Y5S2 1711 aa29.5■■■□□ 2.31
NDUFB4-204ENST00000491335 MTUS2Q5JR59 1369 aa29.5■■■□□ 2.31
NDUFB4-204ENST00000491335 CDC42BPAQ5VT25 1732 aa29.45■■■□□ 2.3
NDUFB4-204ENST00000491335 PREX2Q70Z35 1606 aa29.45■■■□□ 2.3
NDUFB4-204ENST00000491335 POGZQ7Z3K3 1410 aa29.4■■■□□ 2.3
NDUFB4-204ENST00000491335 GPATCH8Q9UKJ3 1502 aaKnown RBP29.4■■■□□ 2.3
NDUFB4-204ENST00000491335 EHBP1L1Q8N3D4 1523 aa29.39■■■□□ 2.3
NDUFB4-204ENST00000491335 ZMYM4Q5VZL5 1548 aa29.37■■■□□ 2.29
NDUFB4-204ENST00000491335 TIAM1Q13009 1591 aa29.36■■■□□ 2.29
NDUFB4-204ENST00000491335 CCNB3Q8WWL7 1395 aa29.36■■■□□ 2.29
NDUFB4-204ENST00000491335 ZNF777Q9ULD5 760 aaPredicted RBP29.35■■■□□ 2.29
NDUFB4-204ENST00000491335 AFAP1Q8N556 730 aa29.34■■■□□ 2.29
NDUFB4-204ENST00000491335 ARHGEF40Q8TER5 1519 aa29.32■■■□□ 2.28
NDUFB4-204ENST00000491335 MAGI2Q86UL8 1455 aa29.32■■■□□ 2.28
NDUFB4-204ENST00000491335 YEATS2Q9ULM3 1422 aa29.32■■■□□ 2.28
NDUFB4-204ENST00000491335 CFDP1Q9UEE9 299 aaPredicted RBP29.32■■■□□ 2.28
NDUFB4-204ENST00000491335 ZFYVE16Q7Z3T8 1539 aa29.3■■■□□ 2.28
NDUFB4-204ENST00000491335 ARHGEF12Q9NZN5 1544 aa29.3■■■□□ 2.28
NDUFB4-204ENST00000491335 ZNF518AQ6AHZ1 1483 aa29.3■■■□□ 2.28
NDUFB4-204ENST00000491335 ABCC1P33527 1531 aa29.3■■■□□ 2.28
NDUFB4-204ENST00000491335 ARID4BQ4LE39 1312 aaPredicted RBP29.27■■■□□ 2.28
NDUFB4-204ENST00000491335 TRAPPC8Q9Y2L5 1435 aa29.27■■■□□ 2.28
NDUFB4-204ENST00000491335 SAMD9LQ8IVG5 1584 aa29.26■■■□□ 2.28
NDUFB4-204ENST00000491335 ITSN2Q9NZM3 1697 aa29.26■■■□□ 2.27
NDUFB4-204ENST00000491335 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
NDUFB4-204ENST00000491335 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
NDUFB4-204ENST00000491335 LRRC9Q6ZRR7 1453 aa29.25■■■□□ 2.27
NDUFB4-204ENST00000491335 KANK4Q5T7N3 995 aaPredicted RBP29.25■■■□□ 2.27
NDUFB4-204ENST00000491335 KDM5CP41229 1560 aa29.25■■■□□ 2.27
NDUFB4-204ENST00000491335 NCOA2Q15596 1464 aa29.24■■■□□ 2.27
NDUFB4-204ENST00000491335 HNRNPMP52272 730 aaKnown RBP eCLIP29.23■■■□□ 2.27
NDUFB4-204ENST00000491335 MYT1LQ9UL68 1186 aa29.23■■■□□ 2.27
NDUFB4-204ENST00000491335 ATP10AO60312 1499 aa29.19■■■□□ 2.26
NDUFB4-204ENST00000491335 APLP2Q06481 763 aa29.19■■■□□ 2.26
NDUFB4-204ENST00000491335 SYCP2Q9BX26 1530 aa29.19■■■□□ 2.26
NDUFB4-204ENST00000491335 ZNF644Q9H582 1327 aaPredicted RBP29.19■■■□□ 2.26
NDUFB4-204ENST00000491335 HECW2Q9P2P5 1572 aa29.18■■■□□ 2.26
NDUFB4-204ENST00000491335 KIAA1107Q9UPP5 1409 aa29.17■■■□□ 2.26
NDUFB4-204ENST00000491335 BCORL1Q5H9F3 1711 aa29.17■■■□□ 2.26
NDUFB4-204ENST00000491335 SIGLEC1Q9BZZ2 1709 aa29.17■■■□□ 2.26
NDUFB4-204ENST00000491335 PLEKHH2Q8IVE3 1493 aa29.17■■■□□ 2.26
NDUFB4-204ENST00000491335 MLH3Q9UHC1 1453 aa29.17■■■□□ 2.26
NDUFB4-204ENST00000491335 ADAMTSL3P82987 1691 aa29.15■■■□□ 2.26
NDUFB4-204ENST00000491335 C9orf84Q5VXU9 1444 aa29.12■■■□□ 2.25
NDUFB4-204ENST00000491335 DIP2CQ9Y2E4 1556 aa29.1■■■□□ 2.25
NDUFB4-204ENST00000491335 KIDINS220Q9ULH0 1771 aa29.1■■■□□ 2.25
NDUFB4-204ENST00000491335 SPAG9O60271 1321 aaKnown RBP29.09■■■□□ 2.25
NDUFB4-204ENST00000491335 ABCA6Q8N139 1617 aa29.09■■■□□ 2.25
NDUFB4-204ENST00000491335 MLECQ14165 292 aa29.08■■■□□ 2.25
NDUFB4-204ENST00000491335 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
NDUFB4-204ENST00000491335 MBD5Q9P267 1494 aa29.05■■■□□ 2.24
NDUFB4-204ENST00000491335 CAMSAP2Q08AD1 1489 aa29.03■■■□□ 2.24
NDUFB4-204ENST00000491335 PTPRMP28827 1452 aa29.02■■■□□ 2.24
NDUFB4-204ENST00000491335 REREQ9P2R6 1566 aa29.01■■■□□ 2.23
NDUFB4-204ENST00000491335 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
NDUFB4-204ENST00000491335 MYOM3Q5VTT5 1437 aa28.99■■■□□ 2.23
NDUFB4-204ENST00000491335 RIMS1Q86UR5 1692 aaKnown RBP28.98■■■□□ 2.23
NDUFB4-204ENST00000491335 INO80Q9ULG1 1556 aaPredicted RBP28.97■■■□□ 2.23
NDUFB4-204ENST00000491335 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
NDUFB4-204ENST00000491335 AGLP35573 1532 aa28.94■■■□□ 2.22
NDUFB4-204ENST00000491335 MIA2Q96PC5 1412 aa28.94■■■□□ 2.22
NDUFB4-204ENST00000491335 CCDC141Q6ZP82 1450 aa28.92■■■□□ 2.22
NDUFB4-204ENST00000491335 FER1L4A9Z1Z3 1794 aa28.92■■■□□ 2.22
NDUFB4-204ENST00000491335 RTEL1-TNFRSF6BF6WH68 1400 aa28.9■■■□□ 2.22
NDUFB4-204ENST00000491335 ARHGEF5Q12774 1597 aa28.9■■■□□ 2.22
NDUFB4-204ENST00000491335 PLPPR3Q6T4P5 718 aa28.88■■■□□ 2.21
NDUFB4-204ENST00000491335 A2MP01023 1474 aa28.88■■■□□ 2.21
NDUFB4-204ENST00000491335 TSPY4P0CV99 314 aa28.86■■■□□ 2.21
NDUFB4-204ENST00000491335 TSPY10P0CW01 314 aa28.86■■■□□ 2.21
NDUFB4-204ENST00000491335 ADGBQ8N7X0 1667 aa28.84■■■□□ 2.21
NDUFB4-204ENST00000491335 PLXNC1O60486 1568 aa28.82■■■□□ 2.2
NDUFB4-204ENST00000491335 PTPN23Q9H3S7 1636 aa28.81■■■□□ 2.2
NDUFB4-204ENST00000491335 FGD6Q6ZV73 1430 aa28.8■■■□□ 2.2
NDUFB4-204ENST00000491335 CEBPAP49715 358 aaPredicted RBP28.79■■■□□ 2.2
NDUFB4-204ENST00000491335 DHX29Q7Z478 1369 aaKnown RBP28.78■■■□□ 2.2
NDUFB4-204ENST00000491335 ESF1Q9H501 851 aaKnown RBP28.78■■■□□ 2.2
NDUFB4-204ENST00000491335 GGT6Q6P531 493 aa28.74■■■□□ 2.19
NDUFB4-204ENST00000491335 MAST1Q9Y2H9 1570 aa28.74■■■□□ 2.19
NDUFB4-204ENST00000491335 TCOF1Q13428 1488 aaKnown RBP28.73■■■□□ 2.19
NDUFB4-204ENST00000491335 PPARGC1BQ86YN6 1023 aaKnown RBP28.72■■■□□ 2.19
NDUFB4-204ENST00000491335 ABCC5O15440 1437 aa28.7■■■□□ 2.19
NDUFB4-204ENST00000491335 KIF3BO15066 747 aa28.69■■■□□ 2.18
NDUFB4-204ENST00000491335 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
NDUFB4-204ENST00000491335 C3P01024 1663 aa28.67■■■□□ 2.18
NDUFB4-204ENST00000491335 DAPK1P53355 1430 aa28.66■■■□□ 2.18
NDUFB4-204ENST00000491335 DNMT1P26358 1616 aaKnown RBP28.65■■■□□ 2.18
NDUFB4-204ENST00000491335 FAM50AQ14320 339 aaKnown RBP28.65■■■□□ 2.18
NDUFB4-204ENST00000491335 LMTK3Q96Q04 1460 aa28.65■■■□□ 2.18
NDUFB4-204ENST00000491335 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
NDUFB4-204ENST00000491335 PPP6R1Q9UPN7 881 aa28.64■■■□□ 2.18
NDUFB4-204ENST00000491335 SETD1BQ9UPS6 1966 aaKnown RBP28.63■■■□□ 2.17
NDUFB4-204ENST00000491335 CLTCQ00610 1675 aaKnown RBP28.63■■■□□ 2.17
NDUFB4-204ENST00000491335 SHANK2Q9UPX8 1470 aa28.62■■■□□ 2.17
NDUFB4-204ENST00000491335 ZMYM3Q14202 1370 aa28.62■■■□□ 2.17
NDUFB4-204ENST00000491335 MROH2AA6NES4 1674 aa28.61■■■□□ 2.17
NDUFB4-204ENST00000491335 CHIC2Q9UKJ5 165 aa28.6■■■□□ 2.17
NDUFB4-204ENST00000491335 RRP7BPQ9NSQ0 103 aa28.59■■■□□ 2.17
NDUFB4-204ENST00000491335 HSPA2P54652 639 aa28.57■■■□□ 2.16
NDUFB4-204ENST00000491335 KIF15Q9NS87 1388 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms