RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 NISCHQ9Y2I1 1504 aa45.26■■■■■ 4.84
NDUFB4-204ENST00000491335 CCDC180Q9P1Z9 1646 aa40.26■■■■■ 4.04
NDUFB4-204ENST00000491335 ABCC9O60706 1549 aa39.62■■■■□ 3.93
NDUFB4-204ENST00000491335 DCAF8L2P0C7V8 631 aa37.99■■■■□ 3.67
NDUFB4-204ENST00000491335 RB1CC1Q8TDY2 1594 aa37.98■■■■□ 3.67
NDUFB4-204ENST00000491335 NACADO15069 1562 aa37.9■■■■□ 3.66
NDUFB4-204ENST00000491335 ZCCHC6Q5VYS8 1495 aaKnown RBP37.64■■■■□ 3.62
NDUFB4-204ENST00000491335 MYO15BQ96JP2 1530 aa37.61■■■■□ 3.61
NDUFB4-204ENST00000491335 DCAF1Q9Y4B6 1507 aa37.39■■■■□ 3.58
NDUFB4-204ENST00000491335 UNC13AQ9UPW8 1703 aa37.17■■■■□ 3.54
NDUFB4-204ENST00000491335 PABPN1Q86U42 306 aaKnown RBP eCLIP37.05■■■■□ 3.52
NDUFB4-204ENST00000491335 BICRAQ9NZM4 1560 aa36.87■■■■□ 3.49
NDUFB4-204ENST00000491335 SCRIBQ14160 1630 aa36.77■■■■□ 3.48
NDUFB4-204ENST00000491335 DNAJC5BQ9UF47 199 aa36.58■■■■□ 3.45
NDUFB4-204ENST00000491335 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
NDUFB4-204ENST00000491335 EIF4G1Q04637 1599 aaKnown RBP35.89■■■■□ 3.34
NDUFB4-204ENST00000491335 CC2D2AQ9P2K1 1620 aa35.81■■■■□ 3.32
NDUFB4-204ENST00000491335 CECR2Q9BXF3 1484 aa35.6■■■■□ 3.29
NDUFB4-204ENST00000491335 SMARCA4P51532 1647 aa35.14■■■■□ 3.22
NDUFB4-204ENST00000491335 BAZ1AQ9NRL2 1556 aaPredicted RBP35.06■■■■□ 3.2
NDUFB4-204ENST00000491335 NCAPD3P42695 1498 aa35■■■■□ 3.19
NDUFB4-204ENST00000491335 ATAD2BQ9ULI0 1458 aa35■■■■□ 3.19
NDUFB4-204ENST00000491335 SMARCA2P51531 1590 aa34.92■■■■□ 3.18
NDUFB4-204ENST00000491335 MROH2BQ7Z745 1585 aa34.9■■■■□ 3.18
NDUFB4-204ENST00000491335 PEG3Q9GZU2 1588 aa34.78■■■■□ 3.16
NDUFB4-204ENST00000491335 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
NDUFB4-204ENST00000491335 BAZ1BQ9UIG0 1483 aaKnown RBP34.7■■■■□ 3.15
NDUFB4-204ENST00000491335 WIZO95785 1651 aa34.53■■■■□ 3.12
NDUFB4-204ENST00000491335 RSF1Q96T23 1441 aaPredicted RBP34.44■■■■□ 3.1
NDUFB4-204ENST00000491335 NESP48681 1621 aa34.25■■■■□ 3.07
NDUFB4-204ENST00000491335 ERCC6Q03468 1493 aa34.14■■■■□ 3.06
NDUFB4-204ENST00000491335 TOP2AP11388 1531 aaKnown RBP34.09■■■■□ 3.05
NDUFB4-204ENST00000491335 LAMC3Q9Y6N6 1575 aa34.08■■■■□ 3.05
NDUFB4-204ENST00000491335 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
NDUFB4-204ENST00000491335 PDS5BQ9NTI5 1447 aa33.87■■■■□ 3.01
NDUFB4-204ENST00000491335 KIF21AQ7Z4S6 1674 aa33.81■■■■□ 3
NDUFB4-204ENST00000491335 CUX2O14529 1486 aa33.8■■■■□ 3
NDUFB4-204ENST00000491335 CCDC88BA6NC98 1476 aa33.76■■■□□ 2.99
NDUFB4-204ENST00000491335 CFTRP13569 1480 aa33.73■■■□□ 2.99
NDUFB4-204ENST00000491335 THOC2Q8NI27 1593 aaKnown RBP33.7■■■□□ 2.99
NDUFB4-204ENST00000491335 FANCD2Q9BXW9 1451 aa33.59■■■□□ 2.97
NDUFB4-204ENST00000491335 CEP164Q9UPV0 1460 aa33.54■■■□□ 2.96
NDUFB4-204ENST00000491335 MRC2Q9UBG0 1479 aa33.53■■■□□ 2.96
NDUFB4-204ENST00000491335 SUPT5HO00267 1087 aaKnown RBP33.53■■■□□ 2.96
NDUFB4-204ENST00000491335 PRDM2Q13029 1718 aa33.45■■■□□ 2.94
NDUFB4-204ENST00000491335 WDR62O43379 1518 aa33.41■■■□□ 2.94
NDUFB4-204ENST00000491335 URB2Q14146 1524 aaKnown RBP33.28■■■□□ 2.92
NDUFB4-204ENST00000491335 TOPBP1Q92547 1522 aa33.04■■■□□ 2.88
NDUFB4-204ENST00000491335 DNAJC5Q9H3Z4 198 aa33.03■■■□□ 2.88
NDUFB4-204ENST00000491335 ABCC8Q09428 1581 aa33■■■□□ 2.87
NDUFB4-204ENST00000491335 DNMBPQ6XZF7 1577 aa32.96■■■□□ 2.87
NDUFB4-204ENST00000491335 IFT140Q96RY7 1462 aa32.85■■■□□ 2.85
NDUFB4-204ENST00000491335 ZNF608Q9ULD9 1512 aaPredicted RBP32.76■■■□□ 2.83
NDUFB4-204ENST00000491335 CUX1P39880 1505 aa32.74■■■□□ 2.83
NDUFB4-204ENST00000491335 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
NDUFB4-204ENST00000491335 TARBP1Q13395 1621 aaKnown RBP32.68■■■□□ 2.82
NDUFB4-204ENST00000491335 FGD5Q6ZNL6 1462 aa32.65■■■□□ 2.82
NDUFB4-204ENST00000491335 SOGA1O94964 1423 aa32.64■■■□□ 2.82
NDUFB4-204ENST00000491335 RAD54L2Q9Y4B4 1467 aa32.64■■■□□ 2.82
NDUFB4-204ENST00000491335 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
NDUFB4-204ENST00000491335 AQRO60306 1485 aaKnown RBP eCLIP32.56■■■□□ 2.8
NDUFB4-204ENST00000491335 TDRD9Q8NDG6 1382 aaKnown RBP32.49■■■□□ 2.79
NDUFB4-204ENST00000491335 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
NDUFB4-204ENST00000491335 OSCARQ8IYS5 282 aa32.45■■■□□ 2.79
NDUFB4-204ENST00000491335 SYNJ1O43426 1573 aa32.4■■■□□ 2.78
NDUFB4-204ENST00000491335 TOP2BQ02880 1626 aa32.4■■■□□ 2.78
NDUFB4-204ENST00000491335 BIVM-ERCC5R4GMW8 1640 aa32.39■■■□□ 2.78
NDUFB4-204ENST00000491335 WDR97A6NE52 1622 aa32.35■■■□□ 2.77
NDUFB4-204ENST00000491335 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
NDUFB4-204ENST00000491335 GRIN2BQ13224 1484 aa32.24■■■□□ 2.75
NDUFB4-204ENST00000491335 FBLN2P98095 1184 aa32.24■■■□□ 2.75
NDUFB4-204ENST00000491335 GAPVD1Q14C86 1478 aa32.23■■■□□ 2.75
NDUFB4-204ENST00000491335 CHD1O14646 1710 aa32.23■■■□□ 2.75
NDUFB4-204ENST00000491335 SNAPC4Q5SXM2 1469 aa32.22■■■□□ 2.75
NDUFB4-204ENST00000491335 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
NDUFB4-204ENST00000491335 PBRM1Q86U86 1689 aa32.16■■■□□ 2.74
NDUFB4-204ENST00000491335 MAGI1Q96QZ7 1491 aaPredicted RBP32.16■■■□□ 2.74
NDUFB4-204ENST00000491335 CHMP7Q8WUX9 453 aaPredicted RBP32.1■■■□□ 2.73
NDUFB4-204ENST00000491335 SYNJ2O15056 1496 aa32.04■■■□□ 2.72
NDUFB4-204ENST00000491335 ERICH3Q5RHP9 1530 aa31.9■■■□□ 2.7
NDUFB4-204ENST00000491335 RIMBP3CA6NJZ7 1639 aa31.9■■■□□ 2.7
NDUFB4-204ENST00000491335 RIMBP3BA6NNM3 1639 aa31.9■■■□□ 2.7
NDUFB4-204ENST00000491335 RIMBP3Q9UFD9 1639 aa31.9■■■□□ 2.7
NDUFB4-204ENST00000491335 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
NDUFB4-204ENST00000491335 ADAMTS12P58397 1594 aa31.88■■■□□ 2.69
NDUFB4-204ENST00000491335 ARHGEF11O15085 1522 aa31.87■■■□□ 2.69
NDUFB4-204ENST00000491335 CLASP1Q7Z460 1538 aa31.85■■■□□ 2.69
NDUFB4-204ENST00000491335 FHAD1B1AJZ9 1412 aa31.84■■■□□ 2.69
NDUFB4-204ENST00000491335 GRIN2AQ12879 1464 aa31.82■■■□□ 2.68
NDUFB4-204ENST00000491335 KIF27Q86VH2 1401 aa31.8■■■□□ 2.68
NDUFB4-204ENST00000491335 IGF1RP08069 1367 aa31.73■■■□□ 2.67
NDUFB4-204ENST00000491335 NUP160Q12769 1436 aa31.68■■■□□ 2.66
NDUFB4-204ENST00000491335 CEP170Q5SW79 1584 aa31.68■■■□□ 2.66
NDUFB4-204ENST00000491335 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
NDUFB4-204ENST00000491335 ARAP1Q96P48 1450 aa31.61■■■□□ 2.65
NDUFB4-204ENST00000491335 CUL7Q14999 1698 aa31.58■■■□□ 2.65
NDUFB4-204ENST00000491335 RUSC2Q8N2Y8 1516 aa31.53■■■□□ 2.64
NDUFB4-204ENST00000491335 CARMIL1Q5VZK9 1371 aa31.53■■■□□ 2.64
NDUFB4-204ENST00000491335 SHROOM2Q13796 1616 aa31.46■■■□□ 2.63
NDUFB4-204ENST00000491335 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms