RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 POGZQ7Z3K3 1410 aa32.06■■■□□ 2.72
SREBF1-216ENST00000490796 MYO5CQ9NQX4 1742 aa32.06■■■□□ 2.72
SREBF1-216ENST00000490796 YEATS2Q9ULM3 1422 aa32.02■■■□□ 2.72
SREBF1-216ENST00000490796 CASKIN1Q8WXD9 1431 aa32.01■■■□□ 2.72
SREBF1-216ENST00000490796 MADDQ8WXG6 1647 aa32.01■■■□□ 2.72
SREBF1-216ENST00000490796 CCDC18Q5T9S5 1454 aa32■■■□□ 2.71
SREBF1-216ENST00000490796 ARHGAP5Q13017 1502 aa32■■■□□ 2.71
SREBF1-216ENST00000490796 MYT1LQ9UL68 1186 aa31.97■■■□□ 2.71
SREBF1-216ENST00000490796 PCF11O94913 1555 aaKnown RBP31.96■■■□□ 2.71
SREBF1-216ENST00000490796 MLECQ14165 292 aa31.95■■■□□ 2.71
SREBF1-216ENST00000490796 LRRIQ1Q96JM4 1722 aa31.95■■■□□ 2.7
SREBF1-216ENST00000490796 PLPPR3Q6T4P5 718 aa31.93■■■□□ 2.7
SREBF1-216ENST00000490796 RIMS1Q86UR5 1692 aaKnown RBP31.92■■■□□ 2.7
SREBF1-216ENST00000490796 ILDR1Q86SU0 546 aaPredicted RBP31.91■■■□□ 2.7
SREBF1-216ENST00000490796 ZNF518AQ6AHZ1 1483 aa31.91■■■□□ 2.7
SREBF1-216ENST00000490796 ATP10AO60312 1499 aa31.9■■■□□ 2.7
SREBF1-216ENST00000490796 FYCO1Q9BQS8 1478 aa31.89■■■□□ 2.7
SREBF1-216ENST00000490796 AFAP1Q8N556 730 aa31.87■■■□□ 2.69
SREBF1-216ENST00000490796 C9orf84Q5VXU9 1444 aa31.85■■■□□ 2.69
SREBF1-216ENST00000490796 SIGLEC1Q9BZZ2 1709 aa31.8■■■□□ 2.68
SREBF1-216ENST00000490796 CDC42BPBQ9Y5S2 1711 aa31.79■■■□□ 2.68
SREBF1-216ENST00000490796 PREX2Q70Z35 1606 aa31.78■■■□□ 2.68
SREBF1-216ENST00000490796 KDM5CP41229 1560 aa31.77■■■□□ 2.68
SREBF1-216ENST00000490796 ZNF777Q9ULD5 760 aaPredicted RBP31.75■■■□□ 2.67
SREBF1-216ENST00000490796 LMTK3Q96Q04 1460 aa31.75■■■□□ 2.67
SREBF1-216ENST00000490796 FER1L4A9Z1Z3 1794 aa31.75■■■□□ 2.67
SREBF1-216ENST00000490796 ABCC1P33527 1531 aa31.71■■■□□ 2.67
SREBF1-216ENST00000490796 TRAPPC8Q9Y2L5 1435 aa31.7■■■□□ 2.67
SREBF1-216ENST00000490796 MLH3Q9UHC1 1453 aa31.7■■■□□ 2.66
SREBF1-216ENST00000490796 ARHGEF12Q9NZN5 1544 aa31.7■■■□□ 2.66
SREBF1-216ENST00000490796 CDC42BPAQ5VT25 1732 aa31.67■■■□□ 2.66
SREBF1-216ENST00000490796 HSPA2P54652 639 aa31.67■■■□□ 2.66
SREBF1-216ENST00000490796 MTUS2Q5JR59 1369 aa31.67■■■□□ 2.66
SREBF1-216ENST00000490796 DIP2CQ9Y2E4 1556 aa31.66■■■□□ 2.66
SREBF1-216ENST00000490796 ESF1Q9H501 851 aaKnown RBP31.65■■■□□ 2.66
SREBF1-216ENST00000490796 ITSN2Q9NZM3 1697 aa31.64■■■□□ 2.66
SREBF1-216ENST00000490796 CFDP1Q9UEE9 299 aaPredicted RBP31.63■■■□□ 2.65
SREBF1-216ENST00000490796 CCNB3Q8WWL7 1395 aa31.62■■■□□ 2.65
SREBF1-216ENST00000490796 GPATCH8Q9UKJ3 1502 aaKnown RBP31.62■■■□□ 2.65
SREBF1-216ENST00000490796 CEBPAP49715 358 aaPredicted RBP31.61■■■□□ 2.65
SREBF1-216ENST00000490796 ABCA6Q8N139 1617 aa31.6■■■□□ 2.65
SREBF1-216ENST00000490796 REREQ9P2R6 1566 aa31.6■■■□□ 2.65
SREBF1-216ENST00000490796 HNRNPMP52272 730 aaKnown RBP eCLIP31.58■■■□□ 2.652e-8■■■□□ 16.1
SREBF1-216ENST00000490796 CEP162Q5TB80 1403 aa31.58■■■□□ 2.65
SREBF1-216ENST00000490796 SPAG9O60271 1321 aaKnown RBP31.56■■■□□ 2.64
SREBF1-216ENST00000490796 SAMD9LQ8IVG5 1584 aa31.55■■■□□ 2.64
SREBF1-216ENST00000490796 SYCP2Q9BX26 1530 aa31.54■■■□□ 2.64
SREBF1-216ENST00000490796 PLEKHH2Q8IVE3 1493 aa31.54■■■□□ 2.64
SREBF1-216ENST00000490796 AGLP35573 1532 aa31.53■■■□□ 2.64
SREBF1-216ENST00000490796 FBXO41Q8TF61 875 aa31.52■■■□□ 2.64
SREBF1-216ENST00000490796 KIDINS220Q9ULH0 1771 aa31.52■■■□□ 2.64
SREBF1-216ENST00000490796 KIAA1107Q9UPP5 1409 aa31.49■■■□□ 2.63
SREBF1-216ENST00000490796 PREX1Q8TCU6 1659 aa31.48■■■□□ 2.63
SREBF1-216ENST00000490796 EHBP1L1Q8N3D4 1523 aa31.47■■■□□ 2.63
SREBF1-216ENST00000490796 UHRF1BP1Q6BDS2 1440 aa31.46■■■□□ 2.63
SREBF1-216ENST00000490796 SETD1BQ9UPS6 1966 aaKnown RBP31.43■■■□□ 2.62
SREBF1-216ENST00000490796 CNTLNQ9NXG0 1405 aa31.42■■■□□ 2.62
SREBF1-216ENST00000490796 ATP7AQ04656 1500 aa31.4■■■□□ 2.62
SREBF1-216ENST00000490796 TIAM1Q13009 1591 aa31.38■■■□□ 2.61
SREBF1-216ENST00000490796 ZNF644Q9H582 1327 aaPredicted RBP31.37■■■□□ 2.61
SREBF1-216ENST00000490796 C3P01024 1663 aa31.36■■■□□ 2.61
SREBF1-216ENST00000490796 DMRT2Q9Y5R5 561 aa31.36■■■□□ 2.61
SREBF1-216ENST00000490796 A2MP01023 1474 aa31.34■■■□□ 2.61
SREBF1-216ENST00000490796 LOC105371045A0A1W2PR82 267 aa31.34■■■□□ 2.61
SREBF1-216ENST00000490796 SUPT6HQ7KZ85 1726 aaKnown RBP31.34■■■□□ 2.61
SREBF1-216ENST00000490796 INO80Q9ULG1 1556 aaPredicted RBP31.32■■■□□ 2.6
SREBF1-216ENST00000490796 GGT6Q6P531 493 aa31.3■■■□□ 2.6
SREBF1-216ENST00000490796 NCOA2Q15596 1464 aa31.28■■■□□ 2.6
SREBF1-216ENST00000490796 ZMYM3Q14202 1370 aa31.27■■■□□ 2.6
SREBF1-216ENST00000490796 CERKQ8TCT0 537 aa31.26■■■□□ 2.59
SREBF1-216ENST00000490796 MBD5Q9P267 1494 aa31.26■■■□□ 2.59
SREBF1-216ENST00000490796 VPS8Q8N3P4 1428 aa31.24■■■□□ 2.59
SREBF1-216ENST00000490796 PLXNC1O60486 1568 aa31.24■■■□□ 2.59
SREBF1-216ENST00000490796 RTEL1-TNFRSF6BF6WH68 1400 aa31.23■■■□□ 2.59
SREBF1-216ENST00000490796 MROH2AA6NES4 1674 aa31.22■■■□□ 2.59
SREBF1-216ENST00000490796 RSPH4AQ5TD94 716 aa31.22■■■□□ 2.59
SREBF1-216ENST00000490796 NPATQ14207 1427 aa31.22■■■□□ 2.59
SREBF1-216ENST00000490796 ADGBQ8N7X0 1667 aa31.22■■■□□ 2.59
SREBF1-216ENST00000490796 PPP6R1Q9UPN7 881 aa31.21■■■□□ 2.59
SREBF1-216ENST00000490796 CAMSAP2Q08AD1 1489 aa31.19■■■□□ 2.58
SREBF1-216ENST00000490796 CCDC141Q6ZP82 1450 aa31.19■■■□□ 2.58
SREBF1-216ENST00000490796 STRCQ7RTU9 1775 aa31.17■■■□□ 2.58
SREBF1-216ENST00000490796 CLTCQ00610 1675 aaKnown RBP31.17■■■□□ 2.58
SREBF1-216ENST00000490796 DHX29Q7Z478 1369 aaKnown RBP31.16■■■□□ 2.58
SREBF1-216ENST00000490796 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
SREBF1-216ENST00000490796 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
SREBF1-216ENST00000490796 LRRC9Q6ZRR7 1453 aa31.14■■■□□ 2.57
SREBF1-216ENST00000490796 KIF3BO15066 747 aa31.12■■■□□ 2.57
SREBF1-216ENST00000490796 PTPRTO14522 1441 aa31.12■■■□□ 2.57
SREBF1-216ENST00000490796 NCOA1Q15788 1441 aa31.07■■■□□ 2.57
SREBF1-216ENST00000490796 PTPRKQ15262 1439 aa31.07■■■□□ 2.56
SREBF1-216ENST00000490796 APLP2Q06481 763 aa31.06■■■□□ 2.56
SREBF1-216ENST00000490796 CAMSAP1Q5T5Y3 1602 aa31.05■■■□□ 2.56
SREBF1-216ENST00000490796 KANK4Q5T7N3 995 aaPredicted RBP31.04■■■□□ 2.56
SREBF1-216ENST00000490796 ARHGEF5Q12774 1597 aa31.03■■■□□ 2.56
SREBF1-216ENST00000490796 MAP3K1Q13233 1512 aa31.03■■■□□ 2.56
SREBF1-216ENST00000490796 WASHC2CQ9Y4E1 1318 aa31■■■□□ 2.55
SREBF1-216ENST00000490796 NCKAP5LQ9HCH0 1330 aa30.98■■■□□ 2.55
SREBF1-216ENST00000490796 MYO3AQ8NEV4 1616 aa30.98■■■□□ 2.55
SREBF1-216ENST00000490796 CEP170BQ9Y4F5 1589 aaPredicted RBP30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms