RNA–Protein interactions for RNA: ENST00000490527.1

USP34-217, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-217ENST00000490527 G3V3G9 751 aa13.54□□□□□ -0.24
USP34-217ENST00000490527 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
USP34-217ENST00000490527 PDE4AP27815 886 aa13.53□□□□□ -0.24
USP34-217ENST00000490527 MFSD10Q14728 455 aa13.52□□□□□ -0.25
USP34-217ENST00000490527 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
USP34-217ENST00000490527 KIF3CO14782 793 aa13.5□□□□□ -0.25
USP34-217ENST00000490527 C2orf72A6NCS6 295 aa13.48□□□□□ -0.25
USP34-217ENST00000490527 WDR70Q9NW82 654 aa13.48□□□□□ -0.25
USP34-217ENST00000490527 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
USP34-217ENST00000490527 DSG2Q14126 1118 aa13.45□□□□□ -0.26
USP34-217ENST00000490527 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
USP34-217ENST00000490527 TMC2Q8TDI7 906 aa13.44□□□□□ -0.26
USP34-217ENST00000490527 PPP1R15BQ5SWA1 713 aa13.43□□□□□ -0.26
USP34-217ENST00000490527 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
USP34-217ENST00000490527 FOXK1P85037 733 aa13.42□□□□□ -0.26
USP34-217ENST00000490527 E2F4Q16254 413 aa13.39□□□□□ -0.27
USP34-217ENST00000490527 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
USP34-217ENST00000490527 CAMK2BQ13554 666 aa13.38□□□□□ -0.27
USP34-217ENST00000490527 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
USP34-217ENST00000490527 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
USP34-217ENST00000490527 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
USP34-217ENST00000490527 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
USP34-217ENST00000490527 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
USP34-217ENST00000490527 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
USP34-217ENST00000490527 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
USP34-217ENST00000490527 BCANQ96GW7 911 aa13.28□□□□□ -0.28
USP34-217ENST00000490527 LHX8Q68G74 356 aa13.27□□□□□ -0.29
USP34-217ENST00000490527 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
USP34-217ENST00000490527 ARIH1Q9Y4X5 557 aaPredicted RBP13.27□□□□□ -0.29
USP34-217ENST00000490527 DPYSL4O14531 572 aa13.21□□□□□ -0.29
USP34-217ENST00000490527 OXER1Q8TDS5 423 aa13.21□□□□□ -0.29
USP34-217ENST00000490527 NBR1Q14596 966 aa13.2□□□□□ -0.3
USP34-217ENST00000490527 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
USP34-217ENST00000490527 SLC34A2O95436 690 aa13.18□□□□□ -0.3
USP34-217ENST00000490527 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
USP34-217ENST00000490527 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
USP34-217ENST00000490527 SEMA3EO15041 775 aa13.15□□□□□ -0.3
USP34-217ENST00000490527 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
USP34-217ENST00000490527 PDIA6Q15084 440 aa13.12□□□□□ -0.31
USP34-217ENST00000490527 TESPA1A2RU30 521 aaPredicted RBP13.09□□□□□ -0.31
USP34-217ENST00000490527 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
USP34-217ENST00000490527 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
USP34-217ENST00000490527 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
USP34-217ENST00000490527 KDM4FA0A1W2PPD8 638 aa13.06□□□□□ -0.32
USP34-217ENST00000490527 MLLT3P42568 568 aaPredicted RBP13.06□□□□□ -0.32
USP34-217ENST00000490527 EVI5O60447 810 aa13.05□□□□□ -0.32
USP34-217ENST00000490527 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■■□□ 16.9
USP34-217ENST00000490527 TBC1D12O60347 775 aa13.04□□□□□ -0.32
USP34-217ENST00000490527 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
USP34-217ENST00000490527 ARSIQ5FYB1 569 aa13.02□□□□□ -0.33
USP34-217ENST00000490527 ANO8Q9HCE9 1232 aaPredicted RBP13.02□□□□□ -0.33
USP34-217ENST00000490527 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
USP34-217ENST00000490527 SNPHO15079 494 aa12.99□□□□□ -0.33
USP34-217ENST00000490527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP34-217ENST00000490527 PTGER2P43116 358 aa12.98□□□□□ -0.33
USP34-217ENST00000490527 ZNF710Q8N1W2 664 aa12.98□□□□□ -0.33
USP34-217ENST00000490527 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
USP34-217ENST00000490527 NUDT7P0C024 238 aa12.97□□□□□ -0.33
USP34-217ENST00000490527 DDX12PQ92771 950 aa12.95□□□□□ -0.34
USP34-217ENST00000490527 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
USP34-217ENST00000490527 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
USP34-217ENST00000490527 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
USP34-217ENST00000490527 PRIM1P49642 420 aaKnown RBP12.92□□□□□ -0.34
USP34-217ENST00000490527 OSBPP22059 807 aa12.91□□□□□ -0.34
USP34-217ENST00000490527 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
USP34-217ENST00000490527 RBM26Q5T8P6 1007 aaKnown RBP12.9□□□□□ -0.34
USP34-217ENST00000490527 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
USP34-217ENST00000490527 ST18O60284 1047 aa12.88□□□□□ -0.35
USP34-217ENST00000490527 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
USP34-217ENST00000490527 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
USP34-217ENST00000490527 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
USP34-217ENST00000490527 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
USP34-217ENST00000490527 PHF14O94880 888 aa12.86□□□□□ -0.35
USP34-217ENST00000490527 FOSBP53539 338 aa12.85□□□□□ -0.35
USP34-217ENST00000490527 TPRNQ4KMQ1 711 aa12.85□□□□□ -0.35
USP34-217ENST00000490527 LCE2DQ5TA82 110 aaPredicted RBP12.85□□□□□ -0.35
USP34-217ENST00000490527 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
USP34-217ENST00000490527 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
USP34-217ENST00000490527 ZNF454Q8N9F8 522 aa12.81□□□□□ -0.36
USP34-217ENST00000490527 EPAS1Q99814 870 aa12.81□□□□□ -0.36
USP34-217ENST00000490527 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
USP34-217ENST00000490527 MARVELD3Q96A59 401 aa12.79□□□□□ -0.36
USP34-217ENST00000490527 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
USP34-217ENST00000490527 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
USP34-217ENST00000490527 GPR37O15354 613 aa12.77□□□□□ -0.37
USP34-217ENST00000490527 RBM33Q96EV2 1170 aaKnown RBP12.77□□□□□ -0.37
USP34-217ENST00000490527 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
USP34-217ENST00000490527 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
USP34-217ENST00000490527 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
USP34-217ENST00000490527 GPIHBP1Q8IV16 184 aa12.75□□□□□ -0.37
USP34-217ENST00000490527 FBXW7Q969H0 707 aa12.75□□□□□ -0.37
USP34-217ENST00000490527 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
USP34-217ENST00000490527 NUTM2FA1L443 756 aa12.73□□□□□ -0.37
USP34-217ENST00000490527 MAP3K7O43318 606 aa12.73□□□□□ -0.37
USP34-217ENST00000490527 EMP3P54852 163 aa12.72□□□□□ -0.37
USP34-217ENST00000490527 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
USP34-217ENST00000490527 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.37
USP34-217ENST00000490527 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
USP34-217ENST00000490527 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
USP34-217ENST00000490527 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms