RNA–Protein interactions for RNA: ENST00000489843.1

ARF4-206, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3 BASIC

Gene ARF4, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-206ENST00000489843 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.46□□□□□ -0.9
ARF4-206ENST00000489843 PHF8Q9UPP1 1060 aa9.45□□□□□ -0.9
ARF4-206ENST00000489843 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
ARF4-206ENST00000489843 DPY19L2Q6NUT2 758 aa9.43□□□□□ -0.9
ARF4-206ENST00000489843 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
ARF4-206ENST00000489843 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
ARF4-206ENST00000489843 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
ARF4-206ENST00000489843 MFRPQ9BY79 579 aa9.41□□□□□ -0.9
ARF4-206ENST00000489843 SLAIN1Q8ND83 568 aa9.4□□□□□ -0.9
ARF4-206ENST00000489843 TMEM121BQ9BXQ6 578 aaPredicted RBP9.38□□□□□ -0.91
ARF4-206ENST00000489843 RYDENQ9NUL5 291 aaKnown RBP9.37□□□□□ -0.91
ARF4-206ENST00000489843 ST18O60284 1047 aa9.37□□□□□ -0.91
ARF4-206ENST00000489843 MICALL2Q8IY33 904 aa9.37□□□□□ -0.91
ARF4-206ENST00000489843 CADPS2Q86UW7 1296 aa9.36□□□□□ -0.91
ARF4-206ENST00000489843 BCANQ96GW7 911 aa9.35□□□□□ -0.91
ARF4-206ENST00000489843 SNPHO15079 494 aa9.33□□□□□ -0.92
ARF4-206ENST00000489843 PPP1R37O75864 691 aa9.33□□□□□ -0.92
ARF4-206ENST00000489843 PRKCSHP14314 528 aaPredicted RBP9.33□□□□□ -0.92
ARF4-206ENST00000489843 TMEM92Q6UXU6 159 aa9.21□□□□□ -0.94
ARF4-206ENST00000489843 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
ARF4-206ENST00000489843 TMC2Q8TDI7 906 aa9.19□□□□□ -0.94
ARF4-206ENST00000489843 RIMBP2O15034 1052 aa9.18□□□□□ -0.94
ARF4-206ENST00000489843 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
ARF4-206ENST00000489843 KIF3CO14782 793 aa9.16□□□□□ -0.94
ARF4-206ENST00000489843 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
ARF4-206ENST00000489843 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
ARF4-206ENST00000489843 HOXB3P14651 431 aaPredicted RBP9.14□□□□□ -0.95
ARF4-206ENST00000489843 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
ARF4-206ENST00000489843 ZSWIM6Q9HCJ5 1215 aa9.13□□□□□ -0.95
ARF4-206ENST00000489843 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
ARF4-206ENST00000489843 NBR1Q14596 966 aa9.12□□□□□ -0.95
ARF4-206ENST00000489843 MARVELD3Q96A59 401 aa9.12□□□□□ -0.95
ARF4-206ENST00000489843 GPHNQ9NQX3 736 aaPredicted RBP9.11□□□□□ -0.95
ARF4-206ENST00000489843 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
ARF4-206ENST00000489843 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
ARF4-206ENST00000489843 FOXK1P85037 733 aa9.09□□□□□ -0.95
ARF4-206ENST00000489843 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
ARF4-206ENST00000489843 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
ARF4-206ENST00000489843 PDE4AP27815 886 aa9.08□□□□□ -0.96
ARF4-206ENST00000489843 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
ARF4-206ENST00000489843 SLC34A2O95436 690 aa9.07□□□□□ -0.96
ARF4-206ENST00000489843 EMP3P54852 163 aa9.07□□□□□ -0.96
ARF4-206ENST00000489843 CRISPLD2Q9H0B8 497 aa9.07□□□□□ -0.96
ARF4-206ENST00000489843 WDR70Q9NW82 654 aa9.07□□□□□ -0.96
ARF4-206ENST00000489843 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
ARF4-206ENST00000489843 DSG2Q14126 1118 aa9.03□□□□□ -0.96
ARF4-206ENST00000489843 GPR153Q6NV75 609 aa9.03□□□□□ -0.96
ARF4-206ENST00000489843 PLPP6Q8IY26 295 aa9.03□□□□□ -0.96
ARF4-206ENST00000489843 PPP1R15BQ5SWA1 713 aa9.01□□□□□ -0.97
ARF4-206ENST00000489843 MFSD10Q14728 455 aa9□□□□□ -0.97
ARF4-206ENST00000489843 P3H3Q8IVL6 736 aa9□□□□□ -0.97
ARF4-206ENST00000489843 E2F4Q16254 413 aa8.99□□□□□ -0.97
ARF4-206ENST00000489843 ARSIQ5FYB1 569 aa8.99□□□□□ -0.97
ARF4-206ENST00000489843 DDX27Q96GQ7 796 aaKnown RBP8.99□□□□□ -0.97
ARF4-206ENST00000489843 TBC1D12O60347 775 aa8.99□□□□□ -0.97
ARF4-206ENST00000489843 PTCD2Q8WV60 388 aaKnown RBP8.99□□□□□ -0.97
ARF4-206ENST00000489843 PCDHGA4Q9Y5G9 962 aa8.99□□□□□ -0.97
ARF4-206ENST00000489843 ERBB3P21860 1342 aa8.98□□□□□ -0.97
ARF4-206ENST00000489843 FAM205CA6NFA0 338 aa8.98□□□□□ -0.97
ARF4-206ENST00000489843 HS3ST6Q96QI5 342 aa8.97□□□□□ -0.97
ARF4-206ENST00000489843 SEMA3EO15041 775 aa8.95□□□□□ -0.98
ARF4-206ENST00000489843 ARHGEF1Q92888 912 aaKnown RBP8.94□□□□□ -0.98
ARF4-206ENST00000489843 NUDT7P0C024 238 aa8.93□□□□□ -0.98
ARF4-206ENST00000489843 ZNF316A6NFI3 1004 aaPredicted RBP8.92□□□□□ -0.98
ARF4-206ENST00000489843 CAMK2BQ13554 666 aa8.92□□□□□ -0.98
ARF4-206ENST00000489843 VARS2Q5ST30 1063 aaKnown RBP8.92□□□□□ -0.98
ARF4-206ENST00000489843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.92□□□□□ -0.98
ARF4-206ENST00000489843 OXER1Q8TDS5 423 aa8.92□□□□□ -0.98
ARF4-206ENST00000489843 KHSRPQ92945 711 aaKnown RBP eCLIP8.92□□□□□ -0.98
ARF4-206ENST00000489843 PSDA5PKW4 1024 aaPredicted RBP8.91□□□□□ -0.98
ARF4-206ENST00000489843 LMOD2Q6P5Q4 547 aa8.9□□□□□ -0.98
ARF4-206ENST00000489843 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
ARF4-206ENST00000489843 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.999e-8■■■■□ 26.7
ARF4-206ENST00000489843 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
ARF4-206ENST00000489843 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
ARF4-206ENST00000489843 KDM4FA0A1W2PPD8 638 aa8.87□□□□□ -0.99
ARF4-206ENST00000489843 LHX6Q9UPM6 363 aa8.87□□□□□ -0.99
ARF4-206ENST00000489843 MAP3K9P80192 1104 aa8.86□□□□□ -0.99
ARF4-206ENST00000489843 MLLT3P42568 568 aaPredicted RBP8.85□□□□□ -0.99
ARF4-206ENST00000489843 ARIH1Q9Y4X5 557 aaPredicted RBP8.85□□□□□ -0.99
ARF4-206ENST00000489843 DPYSL4O14531 572 aa8.84□□□□□ -0.99
ARF4-206ENST00000489843 PBX2P40425 430 aa8.83□□□□□ -1
ARF4-206ENST00000489843 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
ARF4-206ENST00000489843 EVI5O60447 810 aa8.81□□□□□ -1
ARF4-206ENST00000489843 ANO8Q9HCE9 1232 aaPredicted RBP8.81□□□□□ -1
ARF4-206ENST00000489843 ZC3H15Q8WU90 426 aaKnown RBP8.79□□□□□ -1
ARF4-206ENST00000489843 RNF166Q96A37 237 aaPredicted RBP8.79□□□□□ -1
ARF4-206ENST00000489843 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
ARF4-206ENST00000489843 JPH4Q96JJ6 628 aa8.77□□□□□ -1.01
ARF4-206ENST00000489843 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
ARF4-206ENST00000489843 KCNH8Q96L42 1107 aa8.76□□□□□ -1.01
ARF4-206ENST00000489843 FOSBP53539 338 aa8.75□□□□□ -1.01
ARF4-206ENST00000489843 SPDYE16A6NNV3 312 aaPredicted RBP8.74□□□□□ -1.01
ARF4-206ENST00000489843 ARHGAP33O14559 1287 aa8.74□□□□□ -1.01
ARF4-206ENST00000489843 PDIA6Q15084 440 aa8.74□□□□□ -1.01
ARF4-206ENST00000489843 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
ARF4-206ENST00000489843 PTGER2P43116 358 aa8.73□□□□□ -1.01
ARF4-206ENST00000489843 ZDHHC16Q969W1 377 aa8.72□□□□□ -1.01
ARF4-206ENST00000489843 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
ARF4-206ENST00000489843 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms