RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
SF1-218ENST00000489544 EFCAB2Q5VUJ9 269 aa12.91□□□□□ -0.34
SF1-218ENST00000489544 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
SF1-218ENST00000489544 MYO5CQ9NQX4 1742 aa12.91□□□□□ -0.34
SF1-218ENST00000489544 AKNAQ7Z591 1439 aa12.9□□□□□ -0.34
SF1-218ENST00000489544 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
SF1-218ENST00000489544 CDC42BPBQ9Y5S2 1711 aa12.9□□□□□ -0.34
SF1-218ENST00000489544 ZNF644Q9H582 1327 aaPredicted RBP12.89□□□□□ -0.35
SF1-218ENST00000489544 PREX2Q70Z35 1606 aa12.89□□□□□ -0.35
SF1-218ENST00000489544 RAPGEF3O95398 923 aa12.89□□□□□ -0.35
SF1-218ENST00000489544 PHLDB1Q86UU1 1377 aa12.89□□□□□ -0.35
SF1-218ENST00000489544 NEO1Q92859 1461 aa12.89□□□□□ -0.35
SF1-218ENST00000489544 KDM6BO15054 1643 aa12.88□□□□□ -0.35
SF1-218ENST00000489544 ARAP3Q8WWN8 1544 aa12.87□□□□□ -0.35
SF1-218ENST00000489544 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
SF1-218ENST00000489544 SCAPERQ9BY12 1400 aa12.86□□□□□ -0.35
SF1-218ENST00000489544 ARHGEF12Q9NZN5 1544 aa12.85□□□□□ -0.35
SF1-218ENST00000489544 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
SF1-218ENST00000489544 SAMD9LQ8IVG5 1584 aa12.85□□□□□ -0.35
SF1-218ENST00000489544 HNRNPMP52272 730 aaKnown RBP eCLIP12.84□□□□□ -0.35
SF1-218ENST00000489544 CFAP74Q9C0B2 1584 aa12.83□□□□□ -0.36
SF1-218ENST00000489544 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
SF1-218ENST00000489544 DENND4BO75064 1496 aaPredicted RBP12.83□□□□□ -0.36
SF1-218ENST00000489544 TRAPPC8Q9Y2L5 1435 aa12.82□□□□□ -0.36
SF1-218ENST00000489544 ITSN2Q9NZM3 1697 aa12.82□□□□□ -0.36
SF1-218ENST00000489544 ABCC1P33527 1531 aa12.82□□□□□ -0.36
SF1-218ENST00000489544 FRMPD1Q5SYB0 1578 aa12.81□□□□□ -0.36
SF1-218ENST00000489544 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
SF1-218ENST00000489544 POGZQ7Z3K3 1410 aa12.8□□□□□ -0.36
SF1-218ENST00000489544 CAMSAP2Q08AD1 1489 aa12.8□□□□□ -0.36
SF1-218ENST00000489544 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
SF1-218ENST00000489544 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
SF1-218ENST00000489544 RICTORQ6R327 1708 aa12.78□□□□□ -0.36
SF1-218ENST00000489544 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
SF1-218ENST00000489544 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
SF1-218ENST00000489544 KIAA1107Q9UPP5 1409 aa12.77□□□□□ -0.37
SF1-218ENST00000489544 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
SF1-218ENST00000489544 YEATS2Q9ULM3 1422 aa12.76□□□□□ -0.37
SF1-218ENST00000489544 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
SF1-218ENST00000489544 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
SF1-218ENST00000489544 ZNF518AQ6AHZ1 1483 aa12.75□□□□□ -0.37
SF1-218ENST00000489544 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
SF1-218ENST00000489544 KDM5CP41229 1560 aa12.73□□□□□ -0.37
SF1-218ENST00000489544 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
SF1-218ENST00000489544 SPAG9O60271 1321 aaKnown RBP12.72□□□□□ -0.37
SF1-218ENST00000489544 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
SF1-218ENST00000489544 ABCC5O15440 1437 aa12.71□□□□□ -0.38
SF1-218ENST00000489544 ITGAEP38570 1179 aa12.7□□□□□ -0.38
SF1-218ENST00000489544 FOXD1Q16676 465 aa12.7□□□□□ -0.38
SF1-218ENST00000489544 CHIC2Q9UKJ5 165 aa12.7□□□□□ -0.38
SF1-218ENST00000489544 ZFYVE16Q7Z3T8 1539 aa12.7□□□□□ -0.38
SF1-218ENST00000489544 MLH3Q9UHC1 1453 aa12.7□□□□□ -0.38
SF1-218ENST00000489544 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
SF1-218ENST00000489544 HECW2Q9P2P5 1572 aa12.69□□□□□ -0.38
SF1-218ENST00000489544 DAPK1P53355 1430 aa12.69□□□□□ -0.38
SF1-218ENST00000489544 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
SF1-218ENST00000489544 KIDINS220Q9ULH0 1771 aa12.69□□□□□ -0.38
SF1-218ENST00000489544 ARHGEF40Q8TER5 1519 aa12.68□□□□□ -0.38
SF1-218ENST00000489544 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
SF1-218ENST00000489544 TSPY4P0CV99 314 aa12.68□□□□□ -0.38
SF1-218ENST00000489544 TSPY10P0CW01 314 aa12.68□□□□□ -0.38
SF1-218ENST00000489544 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
SF1-218ENST00000489544 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
SF1-218ENST00000489544 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
SF1-218ENST00000489544 ABCA6Q8N139 1617 aa12.67□□□□□ -0.38
SF1-218ENST00000489544 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
SF1-218ENST00000489544 INO80Q9ULG1 1556 aaPredicted RBP12.67□□□□□ -0.38
SF1-218ENST00000489544 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
SF1-218ENST00000489544 DIP2CQ9Y2E4 1556 aa12.66□□□□□ -0.38
SF1-218ENST00000489544 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
SF1-218ENST00000489544 ATP10AO60312 1499 aa12.65□□□□□ -0.38
SF1-218ENST00000489544 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
SF1-218ENST00000489544 ARID4BQ4LE39 1312 aaPredicted RBP12.65□□□□□ -0.38
SF1-218ENST00000489544 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
SF1-218ENST00000489544 MLECQ14165 292 aa12.64□□□□□ -0.39
SF1-218ENST00000489544 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
SF1-218ENST00000489544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
SF1-218ENST00000489544 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
SF1-218ENST00000489544 MAST1Q9Y2H9 1570 aa12.62□□□□□ -0.39
SF1-218ENST00000489544 SHANK2Q9UPX8 1470 aa12.62□□□□□ -0.39
SF1-218ENST00000489544 A2MP01023 1474 aa12.61□□□□□ -0.39
SF1-218ENST00000489544 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
SF1-218ENST00000489544 DHX29Q7Z478 1369 aaKnown RBP12.59□□□□□ -0.39
SF1-218ENST00000489544 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
SF1-218ENST00000489544 NCOA1Q15788 1441 aa12.59□□□□□ -0.39
SF1-218ENST00000489544 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
SF1-218ENST00000489544 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
SF1-218ENST00000489544 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
SF1-218ENST00000489544 KIF3BO15066 747 aa12.57□□□□□ -0.4
SF1-218ENST00000489544 ADGRL2O95490 1459 aa12.57□□□□□ -0.4
SF1-218ENST00000489544 GGT6Q6P531 493 aa12.56□□□□□ -0.4
SF1-218ENST00000489544 AGLP35573 1532 aa12.55□□□□□ -0.4
SF1-218ENST00000489544 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
SF1-218ENST00000489544 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
SF1-218ENST00000489544 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
SF1-218ENST00000489544 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
SF1-218ENST00000489544 ANKRD50Q9ULJ7 1429 aa12.52□□□□□ -0.41
SF1-218ENST00000489544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.415e-9■■■■□ 22.7
SF1-218ENST00000489544 MADDQ8WXG6 1647 aa12.51□□□□□ -0.41
SF1-218ENST00000489544 ADAMTSL3P82987 1691 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms