RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NCOA2Q15596 1464 aa22.67■■□□□ 1.22
HLA-F-229ENST00000489502 APLP2Q06481 763 aa22.66■■□□□ 1.22
HLA-F-229ENST00000489502 ITSN2Q9NZM3 1697 aa22.65■■□□□ 1.22
HLA-F-229ENST00000489502 GPATCH8Q9UKJ3 1502 aaKnown RBP22.64■■□□□ 1.21
HLA-F-229ENST00000489502 AKNAQ7Z591 1439 aa22.64■■□□□ 1.21
HLA-F-229ENST00000489502 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
HLA-F-229ENST00000489502 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
HLA-F-229ENST00000489502 ADGRL1O94910 1474 aa22.61■■□□□ 1.21
HLA-F-229ENST00000489502 PHLDB1Q86UU1 1377 aa22.6■■□□□ 1.21
HLA-F-229ENST00000489502 SAMD9LQ8IVG5 1584 aa22.59■■□□□ 1.21
HLA-F-229ENST00000489502 ABCC1P33527 1531 aa22.58■■□□□ 1.21
HLA-F-229ENST00000489502 RICTORQ6R327 1708 aa22.58■■□□□ 1.21
HLA-F-229ENST00000489502 EFCAB2Q5VUJ9 269 aa22.58■■□□□ 1.21
HLA-F-229ENST00000489502 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
HLA-F-229ENST00000489502 SCAPERQ9BY12 1400 aa22.55■■□□□ 1.2
HLA-F-229ENST00000489502 RAPGEF3O95398 923 aa22.53■■□□□ 1.2
HLA-F-229ENST00000489502 POGZQ7Z3K3 1410 aa22.53■■□□□ 1.2
HLA-F-229ENST00000489502 SYCP2Q9BX26 1530 aa22.52■■□□□ 1.2
HLA-F-229ENST00000489502 CFDP1Q9UEE9 299 aaPredicted RBP22.52■■□□□ 1.2
HLA-F-229ENST00000489502 ZNF777Q9ULD5 760 aaPredicted RBP22.52■■□□□ 1.2
HLA-F-229ENST00000489502 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.19
HLA-F-229ENST00000489502 ZMYM4Q5VZL5 1548 aa22.49■■□□□ 1.19
HLA-F-229ENST00000489502 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
HLA-F-229ENST00000489502 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
HLA-F-229ENST00000489502 TRAPPC8Q9Y2L5 1435 aa22.46■■□□□ 1.19
HLA-F-229ENST00000489502 ZNF518AQ6AHZ1 1483 aa22.46■■□□□ 1.19
HLA-F-229ENST00000489502 KDM5CP41229 1560 aa22.46■■□□□ 1.19
HLA-F-229ENST00000489502 PPARGC1BQ86YN6 1023 aaKnown RBP22.45■■□□□ 1.18
HLA-F-229ENST00000489502 ZNF644Q9H582 1327 aaPredicted RBP22.45■■□□□ 1.18
HLA-F-229ENST00000489502 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.18
HLA-F-229ENST00000489502 PLEKHH2Q8IVE3 1493 aa22.44■■□□□ 1.18
HLA-F-229ENST00000489502 HECW2Q9P2P5 1572 aa22.42■■□□□ 1.18
HLA-F-229ENST00000489502 ZFYVE16Q7Z3T8 1539 aa22.41■■□□□ 1.18
HLA-F-229ENST00000489502 KIAA1107Q9UPP5 1409 aa22.4■■□□□ 1.18
HLA-F-229ENST00000489502 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
HLA-F-229ENST00000489502 YEATS2Q9ULM3 1422 aa22.4■■□□□ 1.18
HLA-F-229ENST00000489502 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.18
HLA-F-229ENST00000489502 HNRNPMP52272 730 aaKnown RBP eCLIP22.39■■□□□ 1.17
HLA-F-229ENST00000489502 AFAP1Q8N556 730 aa22.39■■□□□ 1.17
HLA-F-229ENST00000489502 FGD6Q6ZV73 1430 aa22.39■■□□□ 1.17
HLA-F-229ENST00000489502 MBD5Q9P267 1494 aa22.37■■□□□ 1.17
HLA-F-229ENST00000489502 ABCA6Q8N139 1617 aa22.35■■□□□ 1.17
HLA-F-229ENST00000489502 INO80Q9ULG1 1556 aaPredicted RBP22.35■■□□□ 1.17
HLA-F-229ENST00000489502 KIDINS220Q9ULH0 1771 aa22.35■■□□□ 1.17
HLA-F-229ENST00000489502 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
HLA-F-229ENST00000489502 MAGI2Q86UL8 1455 aa22.34■■□□□ 1.17
HLA-F-229ENST00000489502 ARHGEF5Q12774 1597 aa22.33■■□□□ 1.17
HLA-F-229ENST00000489502 DIP2CQ9Y2E4 1556 aa22.33■■□□□ 1.17
HLA-F-229ENST00000489502 TCOF1Q13428 1488 aaKnown RBP22.32■■□□□ 1.16
HLA-F-229ENST00000489502 MLH3Q9UHC1 1453 aa22.32■■□□□ 1.16
HLA-F-229ENST00000489502 ATP7AQ04656 1500 aa22.31■■□□□ 1.16
HLA-F-229ENST00000489502 SIGLEC1Q9BZZ2 1709 aa22.31■■□□□ 1.16
HLA-F-229ENST00000489502 MYT1LQ9UL68 1186 aa22.29■■□□□ 1.16
HLA-F-229ENST00000489502 CROCC2H7BZ55 1655 aa22.28■■□□□ 1.16
HLA-F-229ENST00000489502 SPAG9O60271 1321 aaKnown RBP22.28■■□□□ 1.16
HLA-F-229ENST00000489502 DNMT1P26358 1616 aaKnown RBP22.26■■□□□ 1.15
HLA-F-229ENST00000489502 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
HLA-F-229ENST00000489502 ATP10AO60312 1499 aa22.24■■□□□ 1.15
HLA-F-229ENST00000489502 ADGBQ8N7X0 1667 aa22.23■■□□□ 1.15
HLA-F-229ENST00000489502 MAST1Q9Y2H9 1570 aa22.22■■□□□ 1.15
HLA-F-229ENST00000489502 REREQ9P2R6 1566 aa22.21■■□□□ 1.15
HLA-F-229ENST00000489502 FAM50AQ14320 339 aaKnown RBP22.21■■□□□ 1.15
HLA-F-229ENST00000489502 ABCC5O15440 1437 aa22.21■■□□□ 1.15
HLA-F-229ENST00000489502 DAPK1P53355 1430 aa22.21■■□□□ 1.15
HLA-F-229ENST00000489502 SHANK2Q9UPX8 1470 aa22.19■■□□□ 1.14
HLA-F-229ENST00000489502 BCORL1Q5H9F3 1711 aa22.18■■□□□ 1.14
HLA-F-229ENST00000489502 RTEL1-TNFRSF6BF6WH68 1400 aa22.18■■□□□ 1.14
HLA-F-229ENST00000489502 PLXNC1O60486 1568 aa22.17■■□□□ 1.14
HLA-F-229ENST00000489502 ARID4BQ4LE39 1312 aaPredicted RBP22.17■■□□□ 1.14
HLA-F-229ENST00000489502 RSPH4AQ5TD94 716 aa22.16■■□□□ 1.14
HLA-F-229ENST00000489502 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
HLA-F-229ENST00000489502 A2MP01023 1474 aa22.15■■□□□ 1.14
HLA-F-229ENST00000489502 TSPY4P0CV99 314 aa22.13■■□□□ 1.13
HLA-F-229ENST00000489502 TSPY10P0CW01 314 aa22.13■■□□□ 1.13
HLA-F-229ENST00000489502 ADAMTSL3P82987 1691 aa22.12■■□□□ 1.13
HLA-F-229ENST00000489502 AGLP35573 1532 aa22.11■■□□□ 1.13
HLA-F-229ENST00000489502 MADDQ8WXG6 1647 aa22.11■■□□□ 1.13
HLA-F-229ENST00000489502 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
HLA-F-229ENST00000489502 MLECQ14165 292 aa22.09■■□□□ 1.13
HLA-F-229ENST00000489502 PTPRKQ15262 1439 aa22.08■■□□□ 1.13
HLA-F-229ENST00000489502 FER1L4A9Z1Z3 1794 aa22.07■■□□□ 1.12
HLA-F-229ENST00000489502 CHIC2Q9UKJ5 165 aa22.07■■□□□ 1.12
HLA-F-229ENST00000489502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
HLA-F-229ENST00000489502 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
HLA-F-229ENST00000489502 RIMS1Q86UR5 1692 aaKnown RBP22.06■■□□□ 1.12
HLA-F-229ENST00000489502 ADGRL2O95490 1459 aa22.05■■□□□ 1.12
HLA-F-229ENST00000489502 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
HLA-F-229ENST00000489502 ITGAEP38570 1179 aa22.04■■□□□ 1.12
HLA-F-229ENST00000489502 DUOX2Q9NRD8 1548 aa22.03■■□□□ 1.12
HLA-F-229ENST00000489502 ANKRD30AQ9BXX3 1397 aa22.01■■□□□ 1.11
HLA-F-229ENST00000489502 RRP7BPQ9NSQ0 103 aa22.01■■□□□ 1.11
HLA-F-229ENST00000489502 EIF2AK4Q9P2K8 1649 aaKnown RBP22.01■■□□□ 1.11
HLA-F-229ENST00000489502 NCOA1Q15788 1441 aa22■■□□□ 1.11
HLA-F-229ENST00000489502 RNF17Q9BXT8 1623 aaKnown RBP21.98■■□□□ 1.11
HLA-F-229ENST00000489502 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
HLA-F-229ENST00000489502 PTPRMP28827 1452 aa21.96■■□□□ 1.11
HLA-F-229ENST00000489502 KIF3BO15066 747 aa21.95■■□□□ 1.1
HLA-F-229ENST00000489502 MROH1Q8NDA8 1641 aa21.95■■□□□ 1.1
HLA-F-229ENST00000489502 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
HLA-F-229ENST00000489502 CLTCQ00610 1675 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms