RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 DNMT1P26358 1616 aaKnown RBP19.42■□□□□ 0.7
TOP3A-206ENST00000489131 FAM50AQ14320 339 aaKnown RBP19.4■□□□□ 0.7
TOP3A-206ENST00000489131 CFDP1Q9UEE9 299 aaPredicted RBP19.4■□□□□ 0.7
TOP3A-206ENST00000489131 AKNAQ7Z591 1439 aa19.39■□□□□ 0.69
TOP3A-206ENST00000489131 ARHGEF5Q12774 1597 aa19.38■□□□□ 0.69
TOP3A-206ENST00000489131 GLI2P10070 1586 aa19.37■□□□□ 0.69
TOP3A-206ENST00000489131 SAMD9LQ8IVG5 1584 aa19.37■□□□□ 0.69
TOP3A-206ENST00000489131 PLEKHH2Q8IVE3 1493 aa19.36■□□□□ 0.69
TOP3A-206ENST00000489131 PTPRKQ15262 1439 aa19.36■□□□□ 0.69
TOP3A-206ENST00000489131 KIAA1107Q9UPP5 1409 aa19.36■□□□□ 0.69
TOP3A-206ENST00000489131 CROCC2H7BZ55 1655 aa19.36■□□□□ 0.69
TOP3A-206ENST00000489131 DAPK1P53355 1430 aa19.35■□□□□ 0.69
TOP3A-206ENST00000489131 ARHGAP5Q13017 1502 aa19.35■□□□□ 0.69
TOP3A-206ENST00000489131 SHANK2Q9UPX8 1470 aa19.35■□□□□ 0.69
TOP3A-206ENST00000489131 ABCC5O15440 1437 aa19.34■□□□□ 0.69
TOP3A-206ENST00000489131 MBD5Q9P267 1494 aa19.34■□□□□ 0.69
TOP3A-206ENST00000489131 KCNH8Q96L42 1107 aa19.33■□□□□ 0.68
TOP3A-206ENST00000489131 HFM1A2PYH4 1435 aa19.33■□□□□ 0.68
TOP3A-206ENST00000489131 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
TOP3A-206ENST00000489131 ZNF644Q9H582 1327 aaPredicted RBP19.32■□□□□ 0.68
TOP3A-206ENST00000489131 ADGRL2O95490 1459 aa19.3■□□□□ 0.68
TOP3A-206ENST00000489131 ABCC1P33527 1531 aa19.3■□□□□ 0.68
TOP3A-206ENST00000489131 MAP3K4Q9Y6R4 1608 aa19.29■□□□□ 0.68
TOP3A-206ENST00000489131 HRCP23327 699 aa19.29■□□□□ 0.68
TOP3A-206ENST00000489131 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
TOP3A-206ENST00000489131 CFAP74Q9C0B2 1584 aa19.28■□□□□ 0.68
TOP3A-206ENST00000489131 DIP2BQ9P265 1576 aa19.28■□□□□ 0.68
TOP3A-206ENST00000489131 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
TOP3A-206ENST00000489131 EFCAB2Q5VUJ9 269 aa19.28■□□□□ 0.68
TOP3A-206ENST00000489131 MAST1Q9Y2H9 1570 aa19.27■□□□□ 0.68
TOP3A-206ENST00000489131 ADGBQ8N7X0 1667 aa19.27■□□□□ 0.68
TOP3A-206ENST00000489131 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
TOP3A-206ENST00000489131 CCDC141Q6ZP82 1450 aa19.27■□□□□ 0.67
TOP3A-206ENST00000489131 FANCAO15360 1455 aa19.26■□□□□ 0.67
TOP3A-206ENST00000489131 NAIPQ13075 1403 aa19.25■□□□□ 0.67
TOP3A-206ENST00000489131 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
TOP3A-206ENST00000489131 CD109Q6YHK3 1445 aa19.25■□□□□ 0.67
TOP3A-206ENST00000489131 ITGAEP38570 1179 aa19.24■□□□□ 0.67
TOP3A-206ENST00000489131 ARHGEF12Q9NZN5 1544 aa19.23■□□□□ 0.67
TOP3A-206ENST00000489131 NEO1Q92859 1461 aa19.22■□□□□ 0.67
TOP3A-206ENST00000489131 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
TOP3A-206ENST00000489131 NCOA1Q15788 1441 aa19.21■□□□□ 0.67
TOP3A-206ENST00000489131 ZNF777Q9ULD5 760 aaPredicted RBP19.21■□□□□ 0.67
TOP3A-206ENST00000489131 C9orf84Q5VXU9 1444 aa19.2■□□□□ 0.66
TOP3A-206ENST00000489131 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
TOP3A-206ENST00000489131 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
TOP3A-206ENST00000489131 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
TOP3A-206ENST00000489131 ADGRL1O94910 1474 aa19.16■□□□□ 0.66
TOP3A-206ENST00000489131 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
TOP3A-206ENST00000489131 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.66
TOP3A-206ENST00000489131 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
TOP3A-206ENST00000489131 TRAPPC8Q9Y2L5 1435 aa19.14■□□□□ 0.65
TOP3A-206ENST00000489131 PPRC1Q5VV67 1664 aaKnown RBP19.14■□□□□ 0.65
TOP3A-206ENST00000489131 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
TOP3A-206ENST00000489131 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
TOP3A-206ENST00000489131 KDM5CP41229 1560 aa19.12■□□□□ 0.65
TOP3A-206ENST00000489131 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
TOP3A-206ENST00000489131 ZFYVE16Q7Z3T8 1539 aa19.11■□□□□ 0.65
TOP3A-206ENST00000489131 SCAPERQ9BY12 1400 aa19.11■□□□□ 0.65
TOP3A-206ENST00000489131 DHX57Q6P158 1386 aaKnown RBP19.11■□□□□ 0.65
TOP3A-206ENST00000489131 CLSPNQ9HAW4 1339 aa19.11■□□□□ 0.65
TOP3A-206ENST00000489131 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
TOP3A-206ENST00000489131 TEX14Q8IWB6 1497 aa19.1■□□□□ 0.65
TOP3A-206ENST00000489131 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
TOP3A-206ENST00000489131 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
TOP3A-206ENST00000489131 KDM6BO15054 1643 aa19.09■□□□□ 0.65
TOP3A-206ENST00000489131 FAM69CQ0P6D2 419 aa19.08■□□□□ 0.64
TOP3A-206ENST00000489131 RRP7BPQ9NSQ0 103 aa19.08■□□□□ 0.64
TOP3A-206ENST00000489131 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
TOP3A-206ENST00000489131 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
TOP3A-206ENST00000489131 ATP7AQ04656 1500 aa19.05■□□□□ 0.64
TOP3A-206ENST00000489131 DUOX2Q9NRD8 1548 aa19.05■□□□□ 0.64
TOP3A-206ENST00000489131 MLH3Q9UHC1 1453 aa19.05■□□□□ 0.64
TOP3A-206ENST00000489131 RICTORQ6R327 1708 aa19.04■□□□□ 0.64
TOP3A-206ENST00000489131 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
TOP3A-206ENST00000489131 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
TOP3A-206ENST00000489131 ERBINQ96RT1 1412 aa19.02■□□□□ 0.64
TOP3A-206ENST00000489131 KDM5DQ9BY66 1539 aa19.02■□□□□ 0.64
TOP3A-206ENST00000489131 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.64
TOP3A-206ENST00000489131 SPAG9O60271 1321 aaKnown RBP19.01■□□□□ 0.63
TOP3A-206ENST00000489131 KIDINS220Q9ULH0 1771 aa19.01■□□□□ 0.63
TOP3A-206ENST00000489131 ZMYM4Q5VZL5 1548 aa19.01■□□□□ 0.63
TOP3A-206ENST00000489131 HECW2Q9P2P5 1572 aa19.01■□□□□ 0.63
TOP3A-206ENST00000489131 AFAP1Q8N556 730 aa19■□□□□ 0.63
TOP3A-206ENST00000489131 FRMPD1Q5SYB0 1578 aa19■□□□□ 0.63
TOP3A-206ENST00000489131 UNC13BO14795 1591 aa18.98■□□□□ 0.63
TOP3A-206ENST00000489131 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
TOP3A-206ENST00000489131 EIF2AK4Q9P2K8 1649 aaKnown RBP18.97■□□□□ 0.63
TOP3A-206ENST00000489131 TSPOAP1O95153 1857 aa18.96■□□□□ 0.63
TOP3A-206ENST00000489131 BCORL1Q5H9F3 1711 aa18.94■□□□□ 0.62
TOP3A-206ENST00000489131 DEPDC5O75140 1603 aa18.93■□□□□ 0.62
TOP3A-206ENST00000489131 PZPP20742 1482 aa18.93■□□□□ 0.62
TOP3A-206ENST00000489131 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
TOP3A-206ENST00000489131 DHX29Q7Z478 1369 aaKnown RBP18.92■□□□□ 0.62
TOP3A-206ENST00000489131 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
TOP3A-206ENST00000489131 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.62
TOP3A-206ENST00000489131 IQGAP3Q86VI3 1631 aa18.89■□□□□ 0.62
TOP3A-206ENST00000489131 REREQ9P2R6 1566 aa18.89■□□□□ 0.61
TOP3A-206ENST00000489131 A2MP01023 1474 aa18.88■□□□□ 0.61
TOP3A-206ENST00000489131 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms