RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 KDM6BO15054 1643 aa26.92■■□□□ 1.9
HMG20B-213ENST00000488973 KIAA0586Q9BVV6 1533 aa26.92■■□□□ 1.9
HMG20B-213ENST00000488973 MIA2Q96PC5 1412 aa26.89■■□□□ 1.9
HMG20B-213ENST00000488973 MSH5O43196 834 aa26.89■■□□□ 1.9
HMG20B-213ENST00000488973 POLR1AO95602 1720 aaPredicted RBP26.88■■□□□ 1.89
HMG20B-213ENST00000488973 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
HMG20B-213ENST00000488973 NCOA1Q15788 1441 aa26.88■■□□□ 1.89
HMG20B-213ENST00000488973 MPHOSPH9Q99550 1183 aa26.86■■□□□ 1.89
HMG20B-213ENST00000488973 CHIC2Q9UKJ5 165 aa26.86■■□□□ 1.89
HMG20B-213ENST00000488973 IRX6P78412 446 aaPredicted RBP26.84■■□□□ 1.89
HMG20B-213ENST00000488973 PPP4R2Q9NY27 417 aa26.84■■□□□ 1.89
HMG20B-213ENST00000488973 CCDC7Q96M83 1385 aa26.84■■□□□ 1.89
HMG20B-213ENST00000488973 EPRSP07814 1512 aaKnown RBP26.84■■□□□ 1.89
HMG20B-213ENST00000488973 L3MBTL2Q969R5 705 aa26.81■■□□□ 1.88
HMG20B-213ENST00000488973 PRKRIP1Q9H875 184 aaPredicted RBP26.81■■□□□ 1.88
HMG20B-213ENST00000488973 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
HMG20B-213ENST00000488973 CCDC184Q52MB2 194 aa26.78■■□□□ 1.88
HMG20B-213ENST00000488973 RPRD2Q5VT52 1461 aaKnown RBP26.78■■□□□ 1.88
HMG20B-213ENST00000488973 ZBED9Q6R2W3 1325 aa26.77■■□□□ 1.88
HMG20B-213ENST00000488973 C11orf95C9JLR9 678 aaPredicted RBP26.76■■□□□ 1.87
HMG20B-213ENST00000488973 ROCK1Q13464 1354 aa26.75■■□□□ 1.87
HMG20B-213ENST00000488973 NUP160Q12769 1436 aa26.74■■□□□ 1.87
HMG20B-213ENST00000488973 ANKRD30BQ9BXX2 1392 aa26.74■■□□□ 1.87
HMG20B-213ENST00000488973 TEX14Q8IWB6 1497 aa26.74■■□□□ 1.87
HMG20B-213ENST00000488973 DISP1Q96F81 1524 aa26.74■■□□□ 1.87
HMG20B-213ENST00000488973 CDK13Q14004 1512 aaKnown RBP26.73■■□□□ 1.87
HMG20B-213ENST00000488973 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
HMG20B-213ENST00000488973 MRS2Q9HD23 443 aa26.71■■□□□ 1.87
HMG20B-213ENST00000488973 KIAA0556O60303 1618 aa26.71■■□□□ 1.87
HMG20B-213ENST00000488973 SPATA31E1Q6ZUB1 1445 aa26.71■■□□□ 1.87
HMG20B-213ENST00000488973 MYT1LQ9UL68 1186 aa26.7■■□□□ 1.87
HMG20B-213ENST00000488973 DNMT1P26358 1616 aaKnown RBP26.7■■□□□ 1.87
HMG20B-213ENST00000488973 FAM9BQ8IZU0 186 aa26.69■■□□□ 1.86
HMG20B-213ENST00000488973 DAPK1P53355 1430 aa26.68■■□□□ 1.86
HMG20B-213ENST00000488973 NBPF8Q3BBV2 869 aa26.66■■□□□ 1.86
HMG20B-213ENST00000488973 FOXD1Q16676 465 aa26.66■■□□□ 1.86
HMG20B-213ENST00000488973 KIF7Q2M1P5 1343 aa26.64■■□□□ 1.85
HMG20B-213ENST00000488973 FBLN2P98095 1184 aa26.64■■□□□ 1.85
HMG20B-213ENST00000488973 ANO8Q9HCE9 1232 aaPredicted RBP26.62■■□□□ 1.85
HMG20B-213ENST00000488973 ABCC5O15440 1437 aa26.61■■□□□ 1.85
HMG20B-213ENST00000488973 B4GALNT3Q6L9W6 998 aa26.57■■□□□ 1.84
HMG20B-213ENST00000488973 JPH4Q96JJ6 628 aa26.56■■□□□ 1.84
HMG20B-213ENST00000488973 CARMIL2Q6F5E8 1435 aa26.55■■□□□ 1.84
HMG20B-213ENST00000488973 SMG6Q86US8 1419 aaKnown RBP26.55■■□□□ 1.84
HMG20B-213ENST00000488973 SLC4A1APQ9BWU0 796 aaKnown RBP26.54■■□□□ 1.84
HMG20B-213ENST00000488973 MBD5Q9P267 1494 aa26.51■■□□□ 1.83
HMG20B-213ENST00000488973 UBE2Q2Q8WVN8 375 aa26.51■■□□□ 1.83
HMG20B-213ENST00000488973 ADGBQ8N7X0 1667 aa26.51■■□□□ 1.83
HMG20B-213ENST00000488973 PZPP20742 1482 aa26.5■■□□□ 1.83
HMG20B-213ENST00000488973 DHX29Q7Z478 1369 aaKnown RBP26.49■■□□□ 1.83
HMG20B-213ENST00000488973 RAPGEF6Q8TEU7 1601 aa26.49■■□□□ 1.83
HMG20B-213ENST00000488973 NUP153P49790 1475 aaKnown RBP26.49■■□□□ 1.83
HMG20B-213ENST00000488973 BCORL1Q5H9F3 1711 aa26.48■■□□□ 1.83
HMG20B-213ENST00000488973 KIF14Q15058 1648 aa26.46■■□□□ 1.83
HMG20B-213ENST00000488973 ARID3CA6NKF2 412 aa26.45■■□□□ 1.83
HMG20B-213ENST00000488973 ARID4BQ4LE39 1312 aaPredicted RBP26.45■■□□□ 1.82
HMG20B-213ENST00000488973 RNF123Q5XPI4 1314 aa26.45■■□□□ 1.82
HMG20B-213ENST00000488973 ITSN2Q9NZM3 1697 aa26.44■■□□□ 1.82
HMG20B-213ENST00000488973 ZNF644Q9H582 1327 aaPredicted RBP26.44■■□□□ 1.82
HMG20B-213ENST00000488973 NUDCQ9Y266 331 aa26.43■■□□□ 1.82
HMG20B-213ENST00000488973 KDM5CP41229 1560 aa26.42■■□□□ 1.82
HMG20B-213ENST00000488973 KIAA1107Q9UPP5 1409 aa26.41■■□□□ 1.82
HMG20B-213ENST00000488973 USP47Q96K76 1375 aa26.4■■□□□ 1.82
HMG20B-213ENST00000488973 CROCC2H7BZ55 1655 aa26.4■■□□□ 1.82
HMG20B-213ENST00000488973 CAMSAP2Q08AD1 1489 aa26.39■■□□□ 1.81
HMG20B-213ENST00000488973 ADGRL2O95490 1459 aa26.38■■□□□ 1.81
HMG20B-213ENST00000488973 PLB1Q6P1J6 1458 aa26.37■■□□□ 1.81
HMG20B-213ENST00000488973 CHD1O14646 1710 aa26.36■■□□□ 1.81
HMG20B-213ENST00000488973 ROCK2O75116 1388 aaKnown RBP26.35■■□□□ 1.81
HMG20B-213ENST00000488973 TROQ12816 1431 aaPredicted RBP26.33■■□□□ 1.81
HMG20B-213ENST00000488973 ADCY10Q96PN6 1610 aa26.33■■□□□ 1.81
HMG20B-213ENST00000488973 NOP58Q9Y2X3 529 aaKnown RBP26.33■■□□□ 1.81
HMG20B-213ENST00000488973 PRG4Q92954 1404 aaPredicted RBP26.33■■□□□ 1.8
HMG20B-213ENST00000488973 ABCA8O94911 1581 aa26.32■■□□□ 1.8
HMG20B-213ENST00000488973 UHRF1BP1Q6BDS2 1440 aa26.32■■□□□ 1.8
HMG20B-213ENST00000488973 RALGAPBQ86X10 1494 aa26.3■■□□□ 1.8
HMG20B-213ENST00000488973 CCDC136Q96JN2 1154 aa26.29■■□□□ 1.8
HMG20B-213ENST00000488973 PNISRQ8TF01 805 aaKnown RBP26.29■■□□□ 1.8
HMG20B-213ENST00000488973 DEKP35659 375 aaKnown RBP26.28■■□□□ 1.8
HMG20B-213ENST00000488973 GPATCH8Q9UKJ3 1502 aaKnown RBP26.28■■□□□ 1.8
HMG20B-213ENST00000488973 CFDP1Q9UEE9 299 aaPredicted RBP26.28■■□□□ 1.8
HMG20B-213ENST00000488973 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
HMG20B-213ENST00000488973 ARHGEF12Q9NZN5 1544 aa26.26■■□□□ 1.79
HMG20B-213ENST00000488973 PKD2Q13563 968 aa26.25■■□□□ 1.79
HMG20B-213ENST00000488973 ANKRD30AQ9BXX3 1397 aa26.25■■□□□ 1.79
HMG20B-213ENST00000488973 POLR3GLQ9BT43 218 aa26.24■■□□□ 1.79
HMG20B-213ENST00000488973 PTPRGP23470 1445 aa26.23■■□□□ 1.79
HMG20B-213ENST00000488973 ZNF326Q5BKZ1 582 aaKnown RBP26.23■■□□□ 1.79
HMG20B-213ENST00000488973 SALL2Q9Y467 1007 aaPredicted RBP26.23■■□□□ 1.79
HMG20B-213ENST00000488973 KTN1Q86UP2 1357 aaKnown RBP26.22■■□□□ 1.79
HMG20B-213ENST00000488973 KIF15Q9NS87 1388 aa26.22■■□□□ 1.79
HMG20B-213ENST00000488973 TMC1Q8TDI8 760 aa26.22■■□□□ 1.79
HMG20B-213ENST00000488973 LRPPRCP42704 1394 aaKnown RBP26.22■■□□□ 1.79
HMG20B-213ENST00000488973 ANKRD50Q9ULJ7 1429 aa26.2■■□□□ 1.79
HMG20B-213ENST00000488973 E9PCH4 1651 aa26.2■■□□□ 1.78
HMG20B-213ENST00000488973 ANP32AP39687 249 aaKnown RBP26.18■■□□□ 1.78
HMG20B-213ENST00000488973 BRD4O60885 1362 aaPredicted RBP26.18■■□□□ 1.78
HMG20B-213ENST00000488973 PAK3O75914 559 aaPredicted RBP26.18■■□□□ 1.78
HMG20B-213ENST00000488973 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
HMG20B-213ENST00000488973 ATP10BO94823 1461 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms