RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
HDAC7-224ENST00000488927 PREX2Q70Z35 1606 aa24.85■■□□□ 1.57
HDAC7-224ENST00000488927 AKNAQ7Z591 1439 aa24.84■■□□□ 1.57
HDAC7-224ENST00000488927 KDM6BO15054 1643 aa24.83■■□□□ 1.57
HDAC7-224ENST00000488927 CFDP1Q9UEE9 299 aaPredicted RBP24.81■■□□□ 1.56
HDAC7-224ENST00000488927 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
HDAC7-224ENST00000488927 ITSN2Q9NZM3 1697 aa24.79■■□□□ 1.56
HDAC7-224ENST00000488927 CDC42BPBQ9Y5S2 1711 aa24.79■■□□□ 1.56
HDAC7-224ENST00000488927 ADGRL1O94910 1474 aa24.77■■□□□ 1.56
HDAC7-224ENST00000488927 COL17A1Q9UMD9 1497 aaPredicted RBP24.75■■□□□ 1.55
HDAC7-224ENST00000488927 DENND4BO75064 1496 aaPredicted RBP24.74■■□□□ 1.55
HDAC7-224ENST00000488927 PLEKHH2Q8IVE3 1493 aa24.73■■□□□ 1.55
HDAC7-224ENST00000488927 MYOM3Q5VTT5 1437 aa24.73■■□□□ 1.55
HDAC7-224ENST00000488927 SCAPERQ9BY12 1400 aa24.73■■□□□ 1.55
HDAC7-224ENST00000488927 ZNF777Q9ULD5 760 aaPredicted RBP24.73■■□□□ 1.55
HDAC7-224ENST00000488927 MIA2Q96PC5 1412 aa24.71■■□□□ 1.55
HDAC7-224ENST00000488927 KIAA1107Q9UPP5 1409 aa24.69■■□□□ 1.54
HDAC7-224ENST00000488927 ABCC1P33527 1531 aa24.68■■□□□ 1.54
HDAC7-224ENST00000488927 SAMD9LQ8IVG5 1584 aa24.67■■□□□ 1.54
HDAC7-224ENST00000488927 RAPGEF3O95398 923 aa24.67■■□□□ 1.54
HDAC7-224ENST00000488927 POGZQ7Z3K3 1410 aa24.67■■□□□ 1.54
HDAC7-224ENST00000488927 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
HDAC7-224ENST00000488927 CAMSAP2Q08AD1 1489 aa24.62■■□□□ 1.53
HDAC7-224ENST00000488927 ZNF644Q9H582 1327 aaPredicted RBP24.61■■□□□ 1.53
HDAC7-224ENST00000488927 SYCP2Q9BX26 1530 aa24.61■■□□□ 1.53
HDAC7-224ENST00000488927 RICTORQ6R327 1708 aa24.61■■□□□ 1.53
HDAC7-224ENST00000488927 RSPH4AQ5TD94 716 aa24.61■■□□□ 1.53
HDAC7-224ENST00000488927 FRMPD1Q5SYB0 1578 aa24.61■■□□□ 1.53
HDAC7-224ENST00000488927 ARHGEF12Q9NZN5 1544 aa24.61■■□□□ 1.53
HDAC7-224ENST00000488927 FGD6Q6ZV73 1430 aa24.61■■□□□ 1.53
HDAC7-224ENST00000488927 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
HDAC7-224ENST00000488927 HNRNPMP52272 730 aaKnown RBP eCLIP24.59■■□□□ 1.53
HDAC7-224ENST00000488927 ZMYM4Q5VZL5 1548 aa24.59■■□□□ 1.53
HDAC7-224ENST00000488927 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.53
HDAC7-224ENST00000488927 AFAP1Q8N556 730 aa24.58■■□□□ 1.53
HDAC7-224ENST00000488927 TRAPPC8Q9Y2L5 1435 aa24.58■■□□□ 1.53
HDAC7-224ENST00000488927 KDM5CP41229 1560 aa24.57■■□□□ 1.52
HDAC7-224ENST00000488927 MBD5Q9P267 1494 aa24.56■■□□□ 1.52
HDAC7-224ENST00000488927 PTPN23Q9H3S7 1636 aa24.54■■□□□ 1.52
HDAC7-224ENST00000488927 TCOF1Q13428 1488 aaKnown RBP24.54■■□□□ 1.52
HDAC7-224ENST00000488927 MLH3Q9UHC1 1453 aa24.52■■□□□ 1.52
HDAC7-224ENST00000488927 ARHGEF5Q12774 1597 aa24.52■■□□□ 1.52
HDAC7-224ENST00000488927 CCDC141Q6ZP82 1450 aa24.51■■□□□ 1.51
HDAC7-224ENST00000488927 MYT1LQ9UL68 1186 aa24.5■■□□□ 1.51
HDAC7-224ENST00000488927 SPAG9O60271 1321 aaKnown RBP24.5■■□□□ 1.51
HDAC7-224ENST00000488927 ZFYVE16Q7Z3T8 1539 aa24.5■■□□□ 1.51
HDAC7-224ENST00000488927 HECW2Q9P2P5 1572 aa24.5■■□□□ 1.51
HDAC7-224ENST00000488927 ARHGEF40Q8TER5 1519 aa24.47■■□□□ 1.51
HDAC7-224ENST00000488927 TSPY4P0CV99 314 aa24.47■■□□□ 1.51
HDAC7-224ENST00000488927 TSPY10P0CW01 314 aa24.47■■□□□ 1.51
HDAC7-224ENST00000488927 RTEL1-TNFRSF6BF6WH68 1400 aa24.45■■□□□ 1.51
HDAC7-224ENST00000488927 FAM50AQ14320 339 aaKnown RBP24.45■■□□□ 1.5
HDAC7-224ENST00000488927 YEATS2Q9ULM3 1422 aa24.44■■□□□ 1.5
HDAC7-224ENST00000488927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.44■■□□□ 1.5
HDAC7-224ENST00000488927 ATP7AQ04656 1500 aa24.42■■□□□ 1.5
HDAC7-224ENST00000488927 RRBP1Q9P2E9 1410 aaKnown RBP24.42■■□□□ 1.5
HDAC7-224ENST00000488927 ATP10AO60312 1499 aa24.41■■□□□ 1.5
HDAC7-224ENST00000488927 INO80Q9ULG1 1556 aaPredicted RBP24.41■■□□□ 1.5
HDAC7-224ENST00000488927 SHANK2Q9UPX8 1470 aa24.39■■□□□ 1.5
HDAC7-224ENST00000488927 ABCC5O15440 1437 aa24.39■■□□□ 1.5
HDAC7-224ENST00000488927 DAPK1P53355 1430 aa24.39■■□□□ 1.5
HDAC7-224ENST00000488927 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.49
HDAC7-224ENST00000488927 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.49
HDAC7-224ENST00000488927 C9orf84Q5VXU9 1444 aa24.38■■□□□ 1.49
HDAC7-224ENST00000488927 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
HDAC7-224ENST00000488927 DIP2CQ9Y2E4 1556 aa24.37■■□□□ 1.49
HDAC7-224ENST00000488927 ABCA6Q8N139 1617 aa24.35■■□□□ 1.49
HDAC7-224ENST00000488927 REREQ9P2R6 1566 aa24.34■■□□□ 1.49
HDAC7-224ENST00000488927 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
HDAC7-224ENST00000488927 ARID4BQ4LE39 1312 aaPredicted RBP24.31■■□□□ 1.48
HDAC7-224ENST00000488927 A2MP01023 1474 aa24.29■■□□□ 1.48
HDAC7-224ENST00000488927 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
HDAC7-224ENST00000488927 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
HDAC7-224ENST00000488927 PLXNC1O60486 1568 aa24.28■■□□□ 1.48
HDAC7-224ENST00000488927 AGLP35573 1532 aa24.27■■□□□ 1.48
HDAC7-224ENST00000488927 DHX29Q7Z478 1369 aaKnown RBP24.27■■□□□ 1.48
HDAC7-224ENST00000488927 ADGRL2O95490 1459 aa24.25■■□□□ 1.47
HDAC7-224ENST00000488927 CHIC2Q9UKJ5 165 aa24.24■■□□□ 1.47
HDAC7-224ENST00000488927 KIF15Q9NS87 1388 aa24.23■■□□□ 1.47
HDAC7-224ENST00000488927 NCOA1Q15788 1441 aa24.23■■□□□ 1.47
HDAC7-224ENST00000488927 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
HDAC7-224ENST00000488927 ITGAEP38570 1179 aa24.22■■□□□ 1.47
HDAC7-224ENST00000488927 DUOX2Q9NRD8 1548 aa24.21■■□□□ 1.47
HDAC7-224ENST00000488927 PTPRKQ15262 1439 aa24.2■■□□□ 1.46
HDAC7-224ENST00000488927 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
HDAC7-224ENST00000488927 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
HDAC7-224ENST00000488927 ERBINQ96RT1 1412 aa24.17■■□□□ 1.46
HDAC7-224ENST00000488927 BCORL1Q5H9F3 1711 aa24.16■■□□□ 1.46
HDAC7-224ENST00000488927 MLECQ14165 292 aa24.14■■□□□ 1.45
HDAC7-224ENST00000488927 KIF3BO15066 747 aa24.13■■□□□ 1.45
HDAC7-224ENST00000488927 EIF2AK4Q9P2K8 1649 aaKnown RBP24.13■■□□□ 1.45
HDAC7-224ENST00000488927 KDM4FA0A1W2PPD8 638 aa24.12■■□□□ 1.45
HDAC7-224ENST00000488927 PPP6R1Q9UPN7 881 aa24.12■■□□□ 1.45
HDAC7-224ENST00000488927 ADAMTSL3P82987 1691 aa24.11■■□□□ 1.45
HDAC7-224ENST00000488927 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
HDAC7-224ENST00000488927 GGT6Q6P531 493 aa24.09■■□□□ 1.45
HDAC7-224ENST00000488927 ESF1Q9H501 851 aaKnown RBP24.09■■□□□ 1.45
HDAC7-224ENST00000488927 CNTLNQ9NXG0 1405 aa24.05■■□□□ 1.44
HDAC7-224ENST00000488927 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
HDAC7-224ENST00000488927 MADDQ8WXG6 1647 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms