RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
COPS7B-221ENST00000488111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.22■□□□□ 0.83
COPS7B-221ENST00000488111 PTPN23Q9H3S7 1636 aa20.22■□□□□ 0.83
COPS7B-221ENST00000488111 TTC37Q6PGP7 1564 aa20.2■□□□□ 0.82
COPS7B-221ENST00000488111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.19■□□□□ 0.82
COPS7B-221ENST00000488111 CDC42BPAQ5VT25 1732 aa20.17■□□□□ 0.82
COPS7B-221ENST00000488111 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
COPS7B-221ENST00000488111 ITSN2Q9NZM3 1697 aa20.15■□□□□ 0.82
COPS7B-221ENST00000488111 PTPRKQ15262 1439 aa20.14■□□□□ 0.81
COPS7B-221ENST00000488111 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
COPS7B-221ENST00000488111 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
COPS7B-221ENST00000488111 ARHGAP5Q13017 1502 aa20.11■□□□□ 0.81
COPS7B-221ENST00000488111 PLCH2O75038 1416 aa20.11■□□□□ 0.81
COPS7B-221ENST00000488111 CDC42BPBQ9Y5S2 1711 aa20.1■□□□□ 0.81
COPS7B-221ENST00000488111 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■□□□□ 11.1
COPS7B-221ENST00000488111 DNAJC5Q9H3Z4 198 aa20.1■□□□□ 0.81
COPS7B-221ENST00000488111 PREX2Q70Z35 1606 aa20.1■□□□□ 0.81
COPS7B-221ENST00000488111 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
COPS7B-221ENST00000488111 MYO5CQ9NQX4 1742 aa20.08■□□□□ 0.8
COPS7B-221ENST00000488111 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
COPS7B-221ENST00000488111 ABCC5O15440 1437 aa20.06■□□□□ 0.8
COPS7B-221ENST00000488111 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
COPS7B-221ENST00000488111 ABCA9Q8IUA7 1624 aa20.06■□□□□ 0.8
COPS7B-221ENST00000488111 DAPK1P53355 1430 aa20.05■□□□□ 0.8
COPS7B-221ENST00000488111 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
COPS7B-221ENST00000488111 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
COPS7B-221ENST00000488111 FAM69CQ0P6D2 419 aa20.03■□□□□ 0.8
COPS7B-221ENST00000488111 CD109Q6YHK3 1445 aa20.03■□□□□ 0.8
COPS7B-221ENST00000488111 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
COPS7B-221ENST00000488111 FANCAO15360 1455 aa20■□□□□ 0.79
COPS7B-221ENST00000488111 MBD5Q9P267 1494 aa20■□□□□ 0.79
COPS7B-221ENST00000488111 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
COPS7B-221ENST00000488111 SYCP2Q9BX26 1530 aa19.99■□□□□ 0.79
COPS7B-221ENST00000488111 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
COPS7B-221ENST00000488111 TSPY4P0CV99 314 aa19.98■□□□□ 0.79
COPS7B-221ENST00000488111 TSPY10P0CW01 314 aa19.98■□□□□ 0.79
COPS7B-221ENST00000488111 ARHGEF12Q9NZN5 1544 aa19.97■□□□□ 0.79
COPS7B-221ENST00000488111 ARAP3Q8WWN8 1544 aa19.96■□□□□ 0.79
COPS7B-221ENST00000488111 AKNAQ7Z591 1439 aa19.95■□□□□ 0.78
COPS7B-221ENST00000488111 NAIPQ13075 1403 aa19.94■□□□□ 0.78
COPS7B-221ENST00000488111 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
COPS7B-221ENST00000488111 HFM1A2PYH4 1435 aa19.94■□□□□ 0.78
COPS7B-221ENST00000488111 PLEKHH2Q8IVE3 1493 aa19.94■□□□□ 0.78
COPS7B-221ENST00000488111 DIP2BQ9P265 1576 aa19.93■□□□□ 0.78
COPS7B-221ENST00000488111 RSPH4AQ5TD94 716 aa19.93■□□□□ 0.78
COPS7B-221ENST00000488111 AFAP1Q8N556 730 aa19.93■□□□□ 0.78
COPS7B-221ENST00000488111 CCDC141Q6ZP82 1450 aa19.93■□□□□ 0.78
COPS7B-221ENST00000488111 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
COPS7B-221ENST00000488111 ABCC1P33527 1531 aa19.92■□□□□ 0.78
COPS7B-221ENST00000488111 ARHGEF5Q12774 1597 aa19.92■□□□□ 0.78
COPS7B-221ENST00000488111 C9orf84Q5VXU9 1444 aa19.91■□□□□ 0.78
COPS7B-221ENST00000488111 GLI2P10070 1586 aa19.91■□□□□ 0.78
COPS7B-221ENST00000488111 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
COPS7B-221ENST00000488111 SCAPERQ9BY12 1400 aa19.91■□□□□ 0.78
COPS7B-221ENST00000488111 ADGRL1O94910 1474 aa19.9■□□□□ 0.78
COPS7B-221ENST00000488111 ROCK1Q13464 1354 aa19.9■□□□□ 0.78
COPS7B-221ENST00000488111 NCOA1Q15788 1441 aa19.9■□□□□ 0.78
COPS7B-221ENST00000488111 MAP3K4Q9Y6R4 1608 aa19.89■□□□□ 0.77
COPS7B-221ENST00000488111 CROCC2H7BZ55 1655 aa19.88■□□□□ 0.77
COPS7B-221ENST00000488111 ANKRD30AQ9BXX3 1397 aa19.88■□□□□ 0.77
COPS7B-221ENST00000488111 SHANK2Q9UPX8 1470 aa19.87■□□□□ 0.77
COPS7B-221ENST00000488111 MIER1Q8N108 512 aa19.86■□□□□ 0.77
COPS7B-221ENST00000488111 ADGRL2O95490 1459 aa19.85■□□□□ 0.77
COPS7B-221ENST00000488111 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
COPS7B-221ENST00000488111 KDM6BO15054 1643 aa19.84■□□□□ 0.77
COPS7B-221ENST00000488111 SPAG9O60271 1321 aaKnown RBP19.84■□□□□ 0.77
COPS7B-221ENST00000488111 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.76
COPS7B-221ENST00000488111 TSPOAP1O95153 1857 aa19.83■□□□□ 0.76
COPS7B-221ENST00000488111 KIF15Q9NS87 1388 aa19.82■□□□□ 0.76
COPS7B-221ENST00000488111 ADGBQ8N7X0 1667 aa19.82■□□□□ 0.76
COPS7B-221ENST00000488111 NEO1Q92859 1461 aa19.81■□□□□ 0.76
COPS7B-221ENST00000488111 RAPGEF3O95398 923 aa19.81■□□□□ 0.76
COPS7B-221ENST00000488111 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
COPS7B-221ENST00000488111 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
COPS7B-221ENST00000488111 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
COPS7B-221ENST00000488111 KIF13AQ9H1H9 1805 aa19.8■□□□□ 0.76
COPS7B-221ENST00000488111 CFAP74Q9C0B2 1584 aa19.8■□□□□ 0.76
COPS7B-221ENST00000488111 ANKRD50Q9ULJ7 1429 aa19.78■□□□□ 0.76
COPS7B-221ENST00000488111 MAST1Q9Y2H9 1570 aa19.77■□□□□ 0.76
COPS7B-221ENST00000488111 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
COPS7B-221ENST00000488111 PPRC1Q5VV67 1664 aaKnown RBP19.76■□□□□ 0.75
COPS7B-221ENST00000488111 POGZQ7Z3K3 1410 aa19.76■□□□□ 0.75
COPS7B-221ENST00000488111 ZNF518AQ6AHZ1 1483 aa19.75■□□□□ 0.75
COPS7B-221ENST00000488111 DENND4BO75064 1496 aaPredicted RBP19.75■□□□□ 0.75
COPS7B-221ENST00000488111 TEX14Q8IWB6 1497 aa19.74■□□□□ 0.75
COPS7B-221ENST00000488111 RTEL1-TNFRSF6BF6WH68 1400 aa19.73■□□□□ 0.75
COPS7B-221ENST00000488111 ZFYVE16Q7Z3T8 1539 aa19.73■□□□□ 0.75
COPS7B-221ENST00000488111 ATP7AQ04656 1500 aa19.71■□□□□ 0.75
COPS7B-221ENST00000488111 PLXNC1O60486 1568 aa19.7■□□□□ 0.74
COPS7B-221ENST00000488111 INO80Q9ULG1 1556 aaPredicted RBP19.68■□□□□ 0.74
COPS7B-221ENST00000488111 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
COPS7B-221ENST00000488111 KDM5CP41229 1560 aa19.67■□□□□ 0.74
COPS7B-221ENST00000488111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.746e-8■■□□□ 11.8
COPS7B-221ENST00000488111 DUOX2Q9NRD8 1548 aa19.66■□□□□ 0.74
COPS7B-221ENST00000488111 KIDINS220Q9ULH0 1771 aa19.66■□□□□ 0.74
COPS7B-221ENST00000488111 COL17A1Q9UMD9 1497 aaPredicted RBP19.65■□□□□ 0.74
COPS7B-221ENST00000488111 FOXD1Q16676 465 aa19.65■□□□□ 0.74
COPS7B-221ENST00000488111 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
COPS7B-221ENST00000488111 NUP155O75694 1391 aa19.65■□□□□ 0.74
COPS7B-221ENST00000488111 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms