RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 CDC42BPBQ9Y5S2 1711 aa37.91■■■■□ 3.66
RNF38-208ENST00000488058 PREX2Q70Z35 1606 aa37.89■■■■□ 3.66
RNF38-208ENST00000488058 ARHGEF40Q8TER5 1519 aa37.86■■■■□ 3.65
RNF38-208ENST00000488058 POGZQ7Z3K3 1410 aa37.86■■■■□ 3.65
RNF38-208ENST00000488058 ZMYM4Q5VZL5 1548 aa37.85■■■■□ 3.65
RNF38-208ENST00000488058 MTUS2Q5JR59 1369 aa37.84■■■■□ 3.65
RNF38-208ENST00000488058 CDC42BPAQ5VT25 1732 aa37.84■■■■□ 3.65
RNF38-208ENST00000488058 ZFYVE16Q7Z3T8 1539 aa37.8■■■■□ 3.64
RNF38-208ENST00000488058 ARID4BQ4LE39 1312 aaPredicted RBP37.78■■■■□ 3.64
RNF38-208ENST00000488058 YEATS2Q9ULM3 1422 aa37.76■■■■□ 3.63
RNF38-208ENST00000488058 MAGI2Q86UL8 1455 aa37.74■■■■□ 3.63
RNF38-208ENST00000488058 EHBP1L1Q8N3D4 1523 aa37.74■■■■□ 3.63
RNF38-208ENST00000488058 VPS8Q8N3P4 1428 aa37.74■■■■□ 3.63
RNF38-208ENST00000488058 ZNF518AQ6AHZ1 1483 aa37.72■■■■□ 3.63
RNF38-208ENST00000488058 ZNF777Q9ULD5 760 aaPredicted RBP37.71■■■■□ 3.63
RNF38-208ENST00000488058 ABCC1P33527 1531 aa37.71■■■■□ 3.63
RNF38-208ENST00000488058 GPATCH8Q9UKJ3 1502 aaKnown RBP37.7■■■■□ 3.63
RNF38-208ENST00000488058 CCNB3Q8WWL7 1395 aa37.68■■■■□ 3.62
RNF38-208ENST00000488058 AFAP1Q8N556 730 aa37.68■■■■□ 3.62
RNF38-208ENST00000488058 MYT1LQ9UL68 1186 aa37.68■■■■□ 3.62
RNF38-208ENST00000488058 ITSN2Q9NZM3 1697 aa37.68■■■■□ 3.62
RNF38-208ENST00000488058 BCORL1Q5H9F3 1711 aa37.67■■■■□ 3.62
RNF38-208ENST00000488058 KDM5CP41229 1560 aa37.64■■■■□ 3.62
RNF38-208ENST00000488058 ARHGEF12Q9NZN5 1544 aa37.64■■■■□ 3.62
RNF38-208ENST00000488058 TIAM1Q13009 1591 aa37.63■■■■□ 3.62
RNF38-208ENST00000488058 ADAMTSL3P82987 1691 aa37.63■■■■□ 3.62
RNF38-208ENST00000488058 SAMD9LQ8IVG5 1584 aa37.63■■■■□ 3.61
RNF38-208ENST00000488058 CFDP1Q9UEE9 299 aaPredicted RBP37.61■■■■□ 3.61
RNF38-208ENST00000488058 TRAPPC8Q9Y2L5 1435 aa37.61■■■■□ 3.61
RNF38-208ENST00000488058 HECW2Q9P2P5 1572 aa37.6■■■■□ 3.61
RNF38-208ENST00000488058 SIGLEC1Q9BZZ2 1709 aa37.6■■■■□ 3.61
RNF38-208ENST00000488058 ATP10AO60312 1499 aa37.57■■■■□ 3.6
RNF38-208ENST00000488058 SYCP2Q9BX26 1530 aa37.56■■■■□ 3.6
RNF38-208ENST00000488058 SUPT6HQ7KZ85 1726 aaKnown RBP37.56■■■■□ 3.6
RNF38-208ENST00000488058 MADDQ8WXG6 1647 aa37.55■■■■□ 3.6
RNF38-208ENST00000488058 C9orf84Q5VXU9 1444 aa37.54■■■■□ 3.6
RNF38-208ENST00000488058 HNRNPMP52272 730 aaKnown RBP eCLIP37.5■■■■□ 3.59
RNF38-208ENST00000488058 MLECQ14165 292 aa37.5■■■■□ 3.59
RNF38-208ENST00000488058 NCOA2Q15596 1464 aa37.5■■■■□ 3.59
RNF38-208ENST00000488058 MLH3Q9UHC1 1453 aa37.49■■■■□ 3.59
RNF38-208ENST00000488058 DIP2CQ9Y2E4 1556 aa37.49■■■■□ 3.59
RNF38-208ENST00000488058 ABCA6Q8N139 1617 aa37.48■■■■□ 3.59
RNF38-208ENST00000488058 PTPRMP28827 1452 aa37.48■■■■□ 3.59
RNF38-208ENST00000488058 PLEKHH2Q8IVE3 1493 aa37.48■■■■□ 3.59
RNF38-208ENST00000488058 RIMS1Q86UR5 1692 aaKnown RBP37.47■■■■□ 3.59
RNF38-208ENST00000488058 LRRC9Q6ZRR7 1453 aa37.45■■■■□ 3.59
RNF38-208ENST00000488058 KIAA1107Q9UPP5 1409 aa37.43■■■■□ 3.58
RNF38-208ENST00000488058 KIDINS220Q9ULH0 1771 aa37.42■■■■□ 3.58
RNF38-208ENST00000488058 MAP3K1Q13233 1512 aa37.41■■■■□ 3.58
RNF38-208ENST00000488058 ZNF644Q9H582 1327 aaPredicted RBP37.4■■■■□ 3.58
RNF38-208ENST00000488058 SPAG9O60271 1321 aaKnown RBP37.38■■■■□ 3.58
RNF38-208ENST00000488058 FER1L4A9Z1Z3 1794 aa37.37■■■■□ 3.57
RNF38-208ENST00000488058 KANK4Q5T7N3 995 aaPredicted RBP37.37■■■■□ 3.57
RNF38-208ENST00000488058 REREQ9P2R6 1566 aa37.35■■■■□ 3.57
RNF38-208ENST00000488058 APLP2Q06481 763 aa37.35■■■■□ 3.57
RNF38-208ENST00000488058 PLPPR3Q6T4P5 718 aa37.34■■■■□ 3.57
RNF38-208ENST00000488058 ATP7AQ04656 1500 aa37.31■■■■□ 3.56
RNF38-208ENST00000488058 CAMSAP2Q08AD1 1489 aa37.29■■■■□ 3.56
RNF38-208ENST00000488058 INO80Q9ULG1 1556 aaPredicted RBP37.28■■■■□ 3.56
RNF38-208ENST00000488058 MBD5Q9P267 1494 aa37.26■■■■□ 3.55
RNF38-208ENST00000488058 AGLP35573 1532 aa37.23■■■■□ 3.55
RNF38-208ENST00000488058 CCDC141Q6ZP82 1450 aa37.17■■■■□ 3.54
RNF38-208ENST00000488058 MYOM3Q5VTT5 1437 aa37.14■■■■□ 3.54
RNF38-208ENST00000488058 A2MP01023 1474 aa37.13■■■■□ 3.54
RNF38-208ENST00000488058 ADGBQ8N7X0 1667 aa37.12■■■■□ 3.53
RNF38-208ENST00000488058 ESF1Q9H501 851 aaKnown RBP37.11■■■■□ 3.53
RNF38-208ENST00000488058 ARHGEF5Q12774 1597 aa37.09■■■■□ 3.53
RNF38-208ENST00000488058 RSPH4AQ5TD94 716 aa37.09■■■■□ 3.53
RNF38-208ENST00000488058 RTEL1-TNFRSF6BF6WH68 1400 aa37.09■■■■□ 3.53
RNF38-208ENST00000488058 PLXNC1O60486 1568 aa37.08■■■■□ 3.53
RNF38-208ENST00000488058 CEBPAP49715 358 aaPredicted RBP37.07■■■■□ 3.52
RNF38-208ENST00000488058 MIA2Q96PC5 1412 aa37.07■■■■□ 3.52
RNF38-208ENST00000488058 LMTK3Q96Q04 1460 aa37.02■■■■□ 3.52
RNF38-208ENST00000488058 TSPY4P0CV99 314 aa37.02■■■■□ 3.52
RNF38-208ENST00000488058 TSPY10P0CW01 314 aa37.02■■■■□ 3.52
RNF38-208ENST00000488058 C3P01024 1663 aa36.99■■■■□ 3.51
RNF38-208ENST00000488058 GGT6Q6P531 493 aa36.97■■■■□ 3.51
RNF38-208ENST00000488058 CNTLNQ9NXG0 1405 aa36.95■■■■□ 3.51
RNF38-208ENST00000488058 PTPN23Q9H3S7 1636 aa36.95■■■■□ 3.51
RNF38-208ENST00000488058 DHX29Q7Z478 1369 aaKnown RBP36.94■■■■□ 3.5
RNF38-208ENST00000488058 CLTCQ00610 1675 aaKnown RBP36.91■■■■□ 3.5
RNF38-208ENST00000488058 PREX1Q8TCU6 1659 aa36.91■■■■□ 3.5
RNF38-208ENST00000488058 MAST1Q9Y2H9 1570 aa36.9■■■■□ 3.5
RNF38-208ENST00000488058 HSPA2P54652 639 aa36.89■■■■□ 3.5
RNF38-208ENST00000488058 MROH2AA6NES4 1674 aa36.89■■■■□ 3.5
RNF38-208ENST00000488058 FGD6Q6ZV73 1430 aa36.88■■■■□ 3.49
RNF38-208ENST00000488058 KIF3BO15066 747 aa36.85■■■■□ 3.49
RNF38-208ENST00000488058 ZMYM3Q14202 1370 aa36.81■■■■□ 3.48
RNF38-208ENST00000488058 CROCC2H7BZ55 1655 aa36.81■■■■□ 3.48
RNF38-208ENST00000488058 UHRF1BP1Q6BDS2 1440 aa36.8■■■■□ 3.48
RNF38-208ENST00000488058 TCOF1Q13428 1488 aaKnown RBP36.8■■■■□ 3.48
RNF38-208ENST00000488058 SETD1BQ9UPS6 1966 aaKnown RBP36.8■■■■□ 3.48
RNF38-208ENST00000488058 ABCC5O15440 1437 aa36.76■■■■□ 3.48
RNF38-208ENST00000488058 PPP6R1Q9UPN7 881 aa36.76■■■■□ 3.48
RNF38-208ENST00000488058 DNMT1P26358 1616 aaKnown RBP36.76■■■■□ 3.48
RNF38-208ENST00000488058 DAPK1P53355 1430 aa36.75■■■■□ 3.47
RNF38-208ENST00000488058 SHANK2Q9UPX8 1470 aa36.73■■■■□ 3.47
RNF38-208ENST00000488058 FAM50AQ14320 339 aaKnown RBP36.69■■■■□ 3.46
RNF38-208ENST00000488058 NPATQ14207 1427 aa36.68■■■■□ 3.46
RNF38-208ENST00000488058 KDM5DQ9BY66 1539 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms