RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 WDR70Q9NW82 654 aa8.21□□□□□ -1.1
PCGF3-212ENST00000488032 NCKAP5LQ9HCH0 1330 aa8.21□□□□□ -1.1
PCGF3-212ENST00000488032 GPHNQ9NQX3 736 aaPredicted RBP8.2□□□□□ -1.1
PCGF3-212ENST00000488032 MFSD10Q14728 455 aa8.19□□□□□ -1.1
PCGF3-212ENST00000488032 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
PCGF3-212ENST00000488032 DDX27Q96GQ7 796 aaKnown RBP8.18□□□□□ -1.1
PCGF3-212ENST00000488032 LARP6Q9BRS8 491 aaKnown RBP8.18□□□□□ -1.1
PCGF3-212ENST00000488032 P3H3Q8IVL6 736 aa8.17□□□□□ -1.1
PCGF3-212ENST00000488032 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.16□□□□□ -1.1
PCGF3-212ENST00000488032 KIF3CO14782 793 aa8.15□□□□□ -1.1
PCGF3-212ENST00000488032 MAMSTRQ6ZN01 415 aa8.15□□□□□ -1.1
PCGF3-212ENST00000488032 C2orf72A6NCS6 295 aa8.14□□□□□ -1.11
PCGF3-212ENST00000488032 POTEB2H3BUK9 544 aa8.14□□□□□ -1.11
PCGF3-212ENST00000488032 FOXK1P85037 733 aa8.14□□□□□ -1.11
PCGF3-212ENST00000488032 PPP1R15BQ5SWA1 713 aa8.14□□□□□ -1.11
PCGF3-212ENST00000488032 SCUBE2Q9NQ36 999 aa8.14□□□□□ -1.11
PCGF3-212ENST00000488032 TMEM92Q6UXU6 159 aa8.13□□□□□ -1.11
PCGF3-212ENST00000488032 DSG2Q14126 1118 aa8.12□□□□□ -1.11
PCGF3-212ENST00000488032 E2F4Q16254 413 aa8.12□□□□□ -1.11
PCGF3-212ENST00000488032 POTEJP0CG39 1038 aa8.11□□□□□ -1.11
PCGF3-212ENST00000488032 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
PCGF3-212ENST00000488032 KCNV2Q8TDN2 545 aa8.09□□□□□ -1.11
PCGF3-212ENST00000488032 PLPP6Q8IY26 295 aa8.08□□□□□ -1.12
PCGF3-212ENST00000488032 TTBK1Q5TCY1 1321 aaPredicted RBP8.07□□□□□ -1.12
PCGF3-212ENST00000488032 BCANQ96GW7 911 aa8.07□□□□□ -1.12
PCGF3-212ENST00000488032 LHX8Q68G74 356 aa8.06□□□□□ -1.12
PCGF3-212ENST00000488032 ARHGEF1Q92888 912 aaKnown RBP8.06□□□□□ -1.12
PCGF3-212ENST00000488032 ARIH1Q9Y4X5 557 aaPredicted RBP8.06□□□□□ -1.12
PCGF3-212ENST00000488032 SLAIN1Q8ND83 568 aa8.05□□□□□ -1.12
PCGF3-212ENST00000488032 NBR1Q14596 966 aa8.04□□□□□ -1.12
PCGF3-212ENST00000488032 SLC34A2O95436 690 aa8.01□□□□□ -1.13
PCGF3-212ENST00000488032 OTUD5Q96G74 571 aa8.01□□□□□ -1.13
PCGF3-212ENST00000488032 EMILIN3Q9NT22 766 aa8.01□□□□□ -1.13
PCGF3-212ENST00000488032 DOK7Q18PE1 504 aa7.99□□□□□ -1.13
PCGF3-212ENST00000488032 OXER1Q8TDS5 423 aa7.99□□□□□ -1.13
PCGF3-212ENST00000488032 TBC1D12O60347 775 aa7.98□□□□□ -1.13
PCGF3-212ENST00000488032 PTCD2Q8WV60 388 aaKnown RBP7.98□□□□□ -1.13
PCGF3-212ENST00000488032 SPDYE16A6NNV3 312 aaPredicted RBP7.97□□□□□ -1.13
PCGF3-212ENST00000488032 DPYSL4O14531 572 aa7.97□□□□□ -1.13
PCGF3-212ENST00000488032 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
PCGF3-212ENST00000488032 SNPHO15079 494 aa7.97□□□□□ -1.13
PCGF3-212ENST00000488032 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
PCGF3-212ENST00000488032 UPF1Q92900 1129 aaKnown RBP eCLIP7.97□□□□□ -1.13
PCGF3-212ENST00000488032 PDIA6Q15084 440 aa7.96□□□□□ -1.14
PCGF3-212ENST00000488032 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
PCGF3-212ENST00000488032 ZNF316A6NFI3 1004 aaPredicted RBP7.95□□□□□ -1.14
PCGF3-212ENST00000488032 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
PCGF3-212ENST00000488032 ZNF710Q8N1W2 664 aa7.93□□□□□ -1.14
PCGF3-212ENST00000488032 PCDHGA4Q9Y5G9 962 aa7.93□□□□□ -1.14
PCGF3-212ENST00000488032 TESPA1A2RU30 521 aaPredicted RBP7.91□□□□□ -1.14
PCGF3-212ENST00000488032 TULP1O00294 542 aaPredicted RBP7.91□□□□□ -1.14
PCGF3-212ENST00000488032 SEMA3EO15041 775 aa7.91□□□□□ -1.14
PCGF3-212ENST00000488032 EVI5O60447 810 aa7.9□□□□□ -1.14
PCGF3-212ENST00000488032 SMYD5Q6GMV2 418 aa7.89□□□□□ -1.15
PCGF3-212ENST00000488032 PTGER2P43116 358 aa7.88□□□□□ -1.15
PCGF3-212ENST00000488032 GPR153Q6NV75 609 aa7.88□□□□□ -1.15
PCGF3-212ENST00000488032 ARSIQ5FYB1 569 aa7.87□□□□□ -1.15
PCGF3-212ENST00000488032 ANO8Q9HCE9 1232 aaPredicted RBP7.87□□□□□ -1.15
PCGF3-212ENST00000488032 KDM4FA0A1W2PPD8 638 aa7.86□□□□□ -1.15
PCGF3-212ENST00000488032 HOXB1P14653 301 aaPredicted RBP7.85□□□□□ -1.15
PCGF3-212ENST00000488032 NUDT7P0C024 238 aa7.84□□□□□ -1.15
PCGF3-212ENST00000488032 MLLT3P42568 568 aaPredicted RBP7.84□□□□□ -1.15
PCGF3-212ENST00000488032 KHSRPQ92945 711 aaKnown RBP eCLIP7.83□□□□□ -1.16
PCGF3-212ENST00000488032 PHF14O94880 888 aa7.82□□□□□ -1.16
PCGF3-212ENST00000488032 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.82□□□□□ -1.16
PCGF3-212ENST00000488032 JPH4Q96JJ6 628 aa7.82□□□□□ -1.16
PCGF3-212ENST00000488032 PSDA5PKW4 1024 aaPredicted RBP7.81□□□□□ -1.16
PCGF3-212ENST00000488032 GRXCR2A6NFK2 248 aa7.81□□□□□ -1.16
PCGF3-212ENST00000488032 LMOD2Q6P5Q4 547 aa7.81□□□□□ -1.16
PCGF3-212ENST00000488032 DDX12PQ92771 950 aa7.81□□□□□ -1.16
PCGF3-212ENST00000488032 EPAS1Q99814 870 aa7.8□□□□□ -1.16
PCGF3-212ENST00000488032 ST18O60284 1047 aa7.79□□□□□ -1.16
PCGF3-212ENST00000488032 FBXW7Q969H0 707 aa7.79□□□□□ -1.16
PCGF3-212ENST00000488032 OSBPP22059 807 aa7.78□□□□□ -1.16
PCGF3-212ENST00000488032 FOSBP53539 338 aa7.78□□□□□ -1.16
PCGF3-212ENST00000488032 TYW1BQ6NUM6 668 aa7.78□□□□□ -1.16
PCGF3-212ENST00000488032 LHX6Q9UPM6 363 aa7.78□□□□□ -1.16
PCGF3-212ENST00000488032 PCDHGA10Q9Y5H3 936 aa7.77□□□□□ -1.17
PCGF3-212ENST00000488032 EN1Q05925 392 aaPredicted RBP7.76□□□□□ -1.17
PCGF3-212ENST00000488032 PPP4R3BQ5MIZ7 849 aa7.76□□□□□ -1.17
PCGF3-212ENST00000488032 RBM26Q5T8P6 1007 aaKnown RBP7.76□□□□□ -1.17
PCGF3-212ENST00000488032 ZNF454Q8N9F8 522 aa7.76□□□□□ -1.17
PCGF3-212ENST00000488032 EMP3P54852 163 aa7.75□□□□□ -1.17
PCGF3-212ENST00000488032 GPIHBP1Q8IV16 184 aa7.75□□□□□ -1.17
PCGF3-212ENST00000488032 ZDHHC16Q969W1 377 aa7.75□□□□□ -1.17
PCGF3-212ENST00000488032 FAM163AQ96GL9 167 aaPredicted RBP7.75□□□□□ -1.17
PCGF3-212ENST00000488032 MAP3K7O43318 606 aa7.73□□□□□ -1.17
PCGF3-212ENST00000488032 ERBB3P21860 1342 aa7.73□□□□□ -1.17
PCGF3-212ENST00000488032 NUTM2FA1L443 756 aa7.71□□□□□ -1.18
PCGF3-212ENST00000488032 PRIM1P49642 420 aaKnown RBP7.71□□□□□ -1.18
PCGF3-212ENST00000488032 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
PCGF3-212ENST00000488032 MARVELD3Q96A59 401 aa7.71□□□□□ -1.18
PCGF3-212ENST00000488032 BCL2L12Q9HB09 334 aa7.71□□□□□ -1.18
PCGF3-212ENST00000488032 VARS2Q5ST30 1063 aaKnown RBP7.7□□□□□ -1.18
PCGF3-212ENST00000488032 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
PCGF3-212ENST00000488032 ZC3H15Q8WU90 426 aaKnown RBP7.7□□□□□ -1.18
PCGF3-212ENST00000488032 RBM33Q96EV2 1170 aaKnown RBP7.7□□□□□ -1.18
PCGF3-212ENST00000488032 ADAM33Q9BZ11 813 aa7.7□□□□□ -1.18
PCGF3-212ENST00000488032 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
PCGF3-212ENST00000488032 GPR37O15354 613 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms