RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 RAPGEF2Q9Y4G8 1499 aa17.3■□□□□ 0.36
HDLBP-241ENST00000487169 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
HDLBP-241ENST00000487169 PPP4R2Q9NY27 417 aa17.3■□□□□ 0.36
HDLBP-241ENST00000487169 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
HDLBP-241ENST00000487169 EIF5BO60841 1220 aaKnown RBP17.3■□□□□ 0.36
HDLBP-241ENST00000487169 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
HDLBP-241ENST00000487169 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
HDLBP-241ENST00000487169 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
HDLBP-241ENST00000487169 L3MBTL2Q969R5 705 aa17.27■□□□□ 0.36
HDLBP-241ENST00000487169 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
HDLBP-241ENST00000487169 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
HDLBP-241ENST00000487169 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
HDLBP-241ENST00000487169 RBM19Q9Y4C8 960 aaKnown RBP17.25■□□□□ 0.35
HDLBP-241ENST00000487169 MS4A1P11836 297 aa17.25■□□□□ 0.35
HDLBP-241ENST00000487169 HDGFL2Q7Z4V5 671 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-241ENST00000487169 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
HDLBP-241ENST00000487169 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
HDLBP-241ENST00000487169 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
HDLBP-241ENST00000487169 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
HDLBP-241ENST00000487169 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
HDLBP-241ENST00000487169 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-241ENST00000487169 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
HDLBP-241ENST00000487169 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.343e-6■□□□□ 11.1
HDLBP-241ENST00000487169 OS9Q13438 667 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-241ENST00000487169 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
HDLBP-241ENST00000487169 NPHP1O15259 732 aa17.2■□□□□ 0.34
HDLBP-241ENST00000487169 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
HDLBP-241ENST00000487169 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
HDLBP-241ENST00000487169 NUTM2DQ5VT03 806 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-241ENST00000487169 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
HDLBP-241ENST00000487169 RTF1Q92541 710 aaKnown RBP17.17■□□□□ 0.34
HDLBP-241ENST00000487169 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
HDLBP-241ENST00000487169 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
HDLBP-241ENST00000487169 PTPRGP23470 1445 aa17.13■□□□□ 0.33
HDLBP-241ENST00000487169 RALBP1Q15311 655 aa17.13■□□□□ 0.33
HDLBP-241ENST00000487169 TPRNQ4KMQ1 711 aa17.11■□□□□ 0.33
HDLBP-241ENST00000487169 KCNJ4P48050 445 aa17.1■□□□□ 0.33
HDLBP-241ENST00000487169 FGD1P98174 961 aa17.1■□□□□ 0.33
HDLBP-241ENST00000487169 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
HDLBP-241ENST00000487169 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
HDLBP-241ENST00000487169 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
HDLBP-241ENST00000487169 NUTM2FA1L443 756 aa17.09■□□□□ 0.33
HDLBP-241ENST00000487169 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
HDLBP-241ENST00000487169 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
HDLBP-241ENST00000487169 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
HDLBP-241ENST00000487169 TAOK2Q9UL54 1235 aa17.07■□□□□ 0.32
HDLBP-241ENST00000487169 ZRSR1Q15695 479 aaKnown RBP17.06■□□□□ 0.32
HDLBP-241ENST00000487169 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
HDLBP-241ENST00000487169 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
HDLBP-241ENST00000487169 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
HDLBP-241ENST00000487169 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
HDLBP-241ENST00000487169 IGF1RP08069 1367 aa17.06■□□□□ 0.32
HDLBP-241ENST00000487169 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
HDLBP-241ENST00000487169 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
HDLBP-241ENST00000487169 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
HDLBP-241ENST00000487169 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
HDLBP-241ENST00000487169 APBB1O00213 710 aa17.04■□□□□ 0.32
HDLBP-241ENST00000487169 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
HDLBP-241ENST00000487169 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
HDLBP-241ENST00000487169 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
HDLBP-241ENST00000487169 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
HDLBP-241ENST00000487169 ZNF330Q9Y3S2 320 aaPredicted RBP17.01■□□□□ 0.31
HDLBP-241ENST00000487169 CCDC144AA2RUR9 1427 aa17.01■□□□□ 0.31
HDLBP-241ENST00000487169 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
HDLBP-241ENST00000487169 NCAPD3P42695 1498 aa17■□□□□ 0.31
HDLBP-241ENST00000487169 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
HDLBP-241ENST00000487169 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.318e-7■□□□□ 10.8
HDLBP-241ENST00000487169 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
HDLBP-241ENST00000487169 KIF21BO75037 1637 aa16.98■□□□□ 0.31
HDLBP-241ENST00000487169 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
HDLBP-241ENST00000487169 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
HDLBP-241ENST00000487169 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
HDLBP-241ENST00000487169 PTMAP06454 111 aaKnown RBP16.97■□□□□ 0.31
HDLBP-241ENST00000487169 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
HDLBP-241ENST00000487169 AMPHP49418 695 aa16.96■□□□□ 0.31
HDLBP-241ENST00000487169 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
HDLBP-241ENST00000487169 LTV1Q96GA3 475 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-241ENST00000487169 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
HDLBP-241ENST00000487169 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.31
HDLBP-241ENST00000487169 PANK3Q9H999 370 aa16.95■□□□□ 0.3
HDLBP-241ENST00000487169 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
HDLBP-241ENST00000487169 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
HDLBP-241ENST00000487169 ZNF644Q9H582 1327 aaPredicted RBP16.94■□□□□ 0.3
HDLBP-241ENST00000487169 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
HDLBP-241ENST00000487169 RWDD1Q9H446 243 aaPredicted RBP16.93■□□□□ 0.3
HDLBP-241ENST00000487169 HSCBQ8IWL3 235 aa16.92■□□□□ 0.3
HDLBP-241ENST00000487169 DEKP35659 375 aaKnown RBP16.92■□□□□ 0.3
HDLBP-241ENST00000487169 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
HDLBP-241ENST00000487169 TOP2BQ02880 1626 aa16.91■□□□□ 0.3
HDLBP-241ENST00000487169 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
HDLBP-241ENST00000487169 MCCP23508 829 aa16.9■□□□□ 0.3
HDLBP-241ENST00000487169 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
HDLBP-241ENST00000487169 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
HDLBP-241ENST00000487169 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
HDLBP-241ENST00000487169 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.293e-8■■■■■ 34.9
HDLBP-241ENST00000487169 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
HDLBP-241ENST00000487169 GOLGA6L4A6NEF3 574 aa16.88■□□□□ 0.29
HDLBP-241ENST00000487169 SLC4A10Q6U841 1118 aa16.88■□□□□ 0.29
HDLBP-241ENST00000487169 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
HDLBP-241ENST00000487169 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms