RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 KIF14Q15058 1648 aa13.01□□□□□ -0.33
NUDCD3-209ENST00000487118 ZCCHC11Q5TAX3 1644 aaKnown RBP13□□□□□ -0.33
NUDCD3-209ENST00000487118 PTPN23Q9H3S7 1636 aa13□□□□□ -0.33
NUDCD3-209ENST00000487118 PLEKHD1A6NEE1 506 aa13□□□□□ -0.33
NUDCD3-209ENST00000487118 ITSN2Q9NZM3 1697 aa12.98□□□□□ -0.33
NUDCD3-209ENST00000487118 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
NUDCD3-209ENST00000487118 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-209ENST00000487118 HRCP23327 699 aa12.95□□□□□ -0.34
NUDCD3-209ENST00000487118 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
NUDCD3-209ENST00000487118 COL17A1Q9UMD9 1497 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-209ENST00000487118 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
NUDCD3-209ENST00000487118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.91□□□□□ -0.34
NUDCD3-209ENST00000487118 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
NUDCD3-209ENST00000487118 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
NUDCD3-209ENST00000487118 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
NUDCD3-209ENST00000487118 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
NUDCD3-209ENST00000487118 TTC37Q6PGP7 1564 aa12.9□□□□□ -0.35
NUDCD3-209ENST00000487118 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
NUDCD3-209ENST00000487118 DNMT1P26358 1616 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-209ENST00000487118 ITGAEP38570 1179 aa12.89□□□□□ -0.35
NUDCD3-209ENST00000487118 CFDP1Q9UEE9 299 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-209ENST00000487118 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
NUDCD3-209ENST00000487118 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
NUDCD3-209ENST00000487118 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
NUDCD3-209ENST00000487118 DAPK1P53355 1430 aa12.87□□□□□ -0.35
NUDCD3-209ENST00000487118 MYO5CQ9NQX4 1742 aa12.86□□□□□ -0.35
NUDCD3-209ENST00000487118 HFM1A2PYH4 1435 aa12.86□□□□□ -0.35
NUDCD3-209ENST00000487118 ABCC5O15440 1437 aa12.86□□□□□ -0.35
NUDCD3-209ENST00000487118 ZNF644Q9H582 1327 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-209ENST00000487118 GLI2P10070 1586 aa12.86□□□□□ -0.35
NUDCD3-209ENST00000487118 RAB3GAP2Q9H2M9 1393 aa12.85□□□□□ -0.35
NUDCD3-209ENST00000487118 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
NUDCD3-209ENST00000487118 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-209ENST00000487118 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
NUDCD3-209ENST00000487118 CCER1Q8TC90 406 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-209ENST00000487118 SAMD9LQ8IVG5 1584 aa12.84□□□□□ -0.35
NUDCD3-209ENST00000487118 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
NUDCD3-209ENST00000487118 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.35
NUDCD3-209ENST00000487118 ROCK1Q13464 1354 aa12.83□□□□□ -0.36
NUDCD3-209ENST00000487118 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
NUDCD3-209ENST00000487118 PLCH2O75038 1416 aa12.83□□□□□ -0.36
NUDCD3-209ENST00000487118 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.36
NUDCD3-209ENST00000487118 NAIPQ13075 1403 aa12.82□□□□□ -0.36
NUDCD3-209ENST00000487118 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
NUDCD3-209ENST00000487118 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
NUDCD3-209ENST00000487118 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
NUDCD3-209ENST00000487118 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-209ENST00000487118 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
NUDCD3-209ENST00000487118 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
NUDCD3-209ENST00000487118 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
NUDCD3-209ENST00000487118 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
NUDCD3-209ENST00000487118 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
NUDCD3-209ENST00000487118 ZNF777Q9ULD5 760 aaPredicted RBP12.79□□□□□ -0.36
NUDCD3-209ENST00000487118 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
NUDCD3-209ENST00000487118 CCDC141Q6ZP82 1450 aa12.77□□□□□ -0.37
NUDCD3-209ENST00000487118 ABCC1P33527 1531 aa12.77□□□□□ -0.37
NUDCD3-209ENST00000487118 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
NUDCD3-209ENST00000487118 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
NUDCD3-209ENST00000487118 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
NUDCD3-209ENST00000487118 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
NUDCD3-209ENST00000487118 NCOA1Q15788 1441 aa12.75□□□□□ -0.37
NUDCD3-209ENST00000487118 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
NUDCD3-209ENST00000487118 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
NUDCD3-209ENST00000487118 RRP7BPQ9NSQ0 103 aa12.74□□□□□ -0.37
NUDCD3-209ENST00000487118 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
NUDCD3-209ENST00000487118 HNRNPMP52272 730 aaKnown RBP eCLIP12.73□□□□□ -0.373e-6■■■■□ 20.3
NUDCD3-209ENST00000487118 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
NUDCD3-209ENST00000487118 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-209ENST00000487118 HSPA2P54652 639 aa12.72□□□□□ -0.37
NUDCD3-209ENST00000487118 FANCAO15360 1455 aa12.72□□□□□ -0.37
NUDCD3-209ENST00000487118 TEX14Q8IWB6 1497 aa12.72□□□□□ -0.37
NUDCD3-209ENST00000487118 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
NUDCD3-209ENST00000487118 TSPY4P0CV99 314 aa12.7□□□□□ -0.38
NUDCD3-209ENST00000487118 TSPY10P0CW01 314 aa12.7□□□□□ -0.38
NUDCD3-209ENST00000487118 CD109Q6YHK3 1445 aa12.7□□□□□ -0.38
NUDCD3-209ENST00000487118 PLXNC1O60486 1568 aa12.69□□□□□ -0.38
NUDCD3-209ENST00000487118 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
NUDCD3-209ENST00000487118 TRAPPC8Q9Y2L5 1435 aa12.68□□□□□ -0.38
NUDCD3-209ENST00000487118 KIF15Q9NS87 1388 aa12.66□□□□□ -0.38
NUDCD3-209ENST00000487118 NEO1Q92859 1461 aa12.65□□□□□ -0.38
NUDCD3-209ENST00000487118 RTEL1-TNFRSF6BF6WH68 1400 aa12.65□□□□□ -0.38
NUDCD3-209ENST00000487118 ANKRD50Q9ULJ7 1429 aa12.65□□□□□ -0.38
NUDCD3-209ENST00000487118 SCAPERQ9BY12 1400 aa12.64□□□□□ -0.39
NUDCD3-209ENST00000487118 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-209ENST00000487118 ZFYVE16Q7Z3T8 1539 aa12.63□□□□□ -0.39
NUDCD3-209ENST00000487118 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
NUDCD3-209ENST00000487118 KDM5DQ9BY66 1539 aa12.62□□□□□ -0.39
NUDCD3-209ENST00000487118 PTPRMP28827 1452 aa12.62□□□□□ -0.39
NUDCD3-209ENST00000487118 DUOX2Q9NRD8 1548 aa12.62□□□□□ -0.39
NUDCD3-209ENST00000487118 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
NUDCD3-209ENST00000487118 KDM5CP41229 1560 aa12.6□□□□□ -0.39
NUDCD3-209ENST00000487118 PZPP20742 1482 aa12.6□□□□□ -0.39
NUDCD3-209ENST00000487118 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
NUDCD3-209ENST00000487118 ATP7AQ04656 1500 aa12.6□□□□□ -0.39
NUDCD3-209ENST00000487118 POGZQ7Z3K3 1410 aa12.6□□□□□ -0.39
NUDCD3-209ENST00000487118 ERBINQ96RT1 1412 aa12.6□□□□□ -0.39
NUDCD3-209ENST00000487118 SPAG9O60271 1321 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-209ENST00000487118 AFAP1Q8N556 730 aa12.59□□□□□ -0.39
NUDCD3-209ENST00000487118 TRIM52Q96A61 297 aa12.59□□□□□ -0.39
NUDCD3-209ENST00000487118 UNC13BO14795 1591 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms