RNA–Protein interactions for RNA: ENST00000486690.6

LDHA-210, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-210ENST00000486690 EEA1Q15075 1411 aa12.38□□□□□ -0.43
LDHA-210ENST00000486690 ARAP3Q8WWN8 1544 aa12.38□□□□□ -0.43
LDHA-210ENST00000486690 RAPGEF6Q8TEU7 1601 aa12.37□□□□□ -0.43
LDHA-210ENST00000486690 NUP153P49790 1475 aaKnown RBP12.34□□□□□ -0.43
LDHA-210ENST00000486690 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
LDHA-210ENST00000486690 PHLDB1Q86UU1 1377 aa12.33□□□□□ -0.44
LDHA-210ENST00000486690 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
LDHA-210ENST00000486690 KIF21BO75037 1637 aa12.31□□□□□ -0.44
LDHA-210ENST00000486690 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
LDHA-210ENST00000486690 NEO1Q92859 1461 aa12.3□□□□□ -0.44
LDHA-210ENST00000486690 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
LDHA-210ENST00000486690 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.44
LDHA-210ENST00000486690 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
LDHA-210ENST00000486690 FRMPD1Q5SYB0 1578 aa12.26□□□□□ -0.45
LDHA-210ENST00000486690 HECW2Q9P2P5 1572 aa12.26□□□□□ -0.45
LDHA-210ENST00000486690 ADAMTSL3P82987 1691 aa12.26□□□□□ -0.45
LDHA-210ENST00000486690 RAPGEF3O95398 923 aa12.25□□□□□ -0.45
LDHA-210ENST00000486690 PLEKHD1A6NEE1 506 aa12.24□□□□□ -0.45
LDHA-210ENST00000486690 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
LDHA-210ENST00000486690 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
LDHA-210ENST00000486690 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
LDHA-210ENST00000486690 RICTORQ6R327 1708 aa12.23□□□□□ -0.45
LDHA-210ENST00000486690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.23□□□□□ -0.459e-20■□□□□ 9.6
LDHA-210ENST00000486690 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.45
LDHA-210ENST00000486690 RANGAP1P46060 587 aaPredicted RBP12.21□□□□□ -0.45
LDHA-210ENST00000486690 AKNAQ7Z591 1439 aa12.2□□□□□ -0.46
LDHA-210ENST00000486690 TTC37Q6PGP7 1564 aa12.2□□□□□ -0.46
LDHA-210ENST00000486690 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
LDHA-210ENST00000486690 FANCAO15360 1455 aa12.19□□□□□ -0.46
LDHA-210ENST00000486690 PTPRMP28827 1452 aa12.19□□□□□ -0.46
LDHA-210ENST00000486690 ARHGAP35Q9NRY4 1499 aa12.19□□□□□ -0.46
LDHA-210ENST00000486690 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
LDHA-210ENST00000486690 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
LDHA-210ENST00000486690 DENND4BO75064 1496 aaPredicted RBP12.18□□□□□ -0.46
LDHA-210ENST00000486690 ZMYM4Q5VZL5 1548 aa12.17□□□□□ -0.46
LDHA-210ENST00000486690 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
LDHA-210ENST00000486690 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
LDHA-210ENST00000486690 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
LDHA-210ENST00000486690 PLCH2O75038 1416 aa12.16□□□□□ -0.46
LDHA-210ENST00000486690 FMN1Q68DA7 1419 aa12.16□□□□□ -0.46
LDHA-210ENST00000486690 LRRIQ1Q96JM4 1722 aa12.16□□□□□ -0.46
LDHA-210ENST00000486690 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
LDHA-210ENST00000486690 MADDQ8WXG6 1647 aa12.15□□□□□ -0.46
LDHA-210ENST00000486690 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
LDHA-210ENST00000486690 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
LDHA-210ENST00000486690 MAGI2Q86UL8 1455 aa12.14□□□□□ -0.47
LDHA-210ENST00000486690 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
LDHA-210ENST00000486690 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
LDHA-210ENST00000486690 KIF14Q15058 1648 aa12.11□□□□□ -0.47
LDHA-210ENST00000486690 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
LDHA-210ENST00000486690 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
LDHA-210ENST00000486690 ZFYVE16Q7Z3T8 1539 aa12.1□□□□□ -0.47
LDHA-210ENST00000486690 POGZQ7Z3K3 1410 aa12.1□□□□□ -0.47
LDHA-210ENST00000486690 RIMS1Q86UR5 1692 aaKnown RBP12.1□□□□□ -0.47
LDHA-210ENST00000486690 LMTK3Q96Q04 1460 aa12.09□□□□□ -0.47
LDHA-210ENST00000486690 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
LDHA-210ENST00000486690 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
LDHA-210ENST00000486690 EFCAB2Q5VUJ9 269 aa12.08□□□□□ -0.48
LDHA-210ENST00000486690 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
LDHA-210ENST00000486690 TROQ12816 1431 aaPredicted RBP12.08□□□□□ -0.48
LDHA-210ENST00000486690 PCF11O94913 1555 aaKnown RBP12.08□□□□□ -0.48
LDHA-210ENST00000486690 CDC42BPBQ9Y5S2 1711 aa12.08□□□□□ -0.48
LDHA-210ENST00000486690 ATP10AO60312 1499 aa12.06□□□□□ -0.48
LDHA-210ENST00000486690 KDM5CP41229 1560 aa12.05□□□□□ -0.48
LDHA-210ENST00000486690 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
LDHA-210ENST00000486690 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
LDHA-210ENST00000486690 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
LDHA-210ENST00000486690 ARHGEF12Q9NZN5 1544 aa12.04□□□□□ -0.48
LDHA-210ENST00000486690 FER1L4A9Z1Z3 1794 aa12.04□□□□□ -0.48
LDHA-210ENST00000486690 ZNF518AQ6AHZ1 1483 aa12.02□□□□□ -0.48
LDHA-210ENST00000486690 AFAP1Q8N556 730 aa12.02□□□□□ -0.49
LDHA-210ENST00000486690 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
LDHA-210ENST00000486690 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
LDHA-210ENST00000486690 PREX2Q70Z35 1606 aa12.01□□□□□ -0.49
LDHA-210ENST00000486690 CLIP1P30622 1438 aa12.01□□□□□ -0.49
LDHA-210ENST00000486690 CCDC18Q5T9S5 1454 aa12.01□□□□□ -0.49
LDHA-210ENST00000486690 MLH3Q9UHC1 1453 aa12.01□□□□□ -0.49
LDHA-210ENST00000486690 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
LDHA-210ENST00000486690 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
LDHA-210ENST00000486690 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
LDHA-210ENST00000486690 DIP2CQ9Y2E4 1556 aa12□□□□□ -0.49
LDHA-210ENST00000486690 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
LDHA-210ENST00000486690 FKBP8Q14318 412 aa11.99□□□□□ -0.49
LDHA-210ENST00000486690 FBXO41Q8TF61 875 aa11.99□□□□□ -0.49
LDHA-210ENST00000486690 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
LDHA-210ENST00000486690 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
LDHA-210ENST00000486690 FYCO1Q9BQS8 1478 aa11.98□□□□□ -0.49
LDHA-210ENST00000486690 MLECQ14165 292 aa11.98□□□□□ -0.49
LDHA-210ENST00000486690 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
LDHA-210ENST00000486690 ABCC1P33527 1531 aa11.97□□□□□ -0.49
LDHA-210ENST00000486690 TRAPPC8Q9Y2L5 1435 aa11.97□□□□□ -0.49
LDHA-210ENST00000486690 HSPA2P54652 639 aa11.97□□□□□ -0.49
LDHA-210ENST00000486690 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
LDHA-210ENST00000486690 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
LDHA-210ENST00000486690 AGLP35573 1532 aa11.96□□□□□ -0.5
LDHA-210ENST00000486690 CEBPAP49715 358 aaPredicted RBP11.94□□□□□ -0.5
LDHA-210ENST00000486690 GPATCH8Q9UKJ3 1502 aaKnown RBP11.94□□□□□ -0.5
LDHA-210ENST00000486690 C3P01024 1663 aa11.93□□□□□ -0.5
LDHA-210ENST00000486690 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
LDHA-210ENST00000486690 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms