RNA–Protein interactions for RNA: ENST00000485596.5

PDE8A-205, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,999 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-205ENST00000485596 CDK13Q14004 1512 aaKnown RBP23.37■■□□□ 1.33
PDE8A-205ENST00000485596 URB2Q14146 1524 aaKnown RBP23.37■■□□□ 1.33
PDE8A-205ENST00000485596 CUL7Q14999 1698 aa23.35■■□□□ 1.33
PDE8A-205ENST00000485596 PAK3O75914 559 aaPredicted RBP23.35■■□□□ 1.33
PDE8A-205ENST00000485596 CCDC136Q96JN2 1154 aa23.35■■□□□ 1.33
PDE8A-205ENST00000485596 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
PDE8A-205ENST00000485596 NCOA1Q15788 1441 aa23.33■■□□□ 1.32
PDE8A-205ENST00000485596 UGGT2Q9NYU1 1516 aa23.32■■□□□ 1.32
PDE8A-205ENST00000485596 KDM2AQ9Y2K7 1162 aa23.31■■□□□ 1.32
PDE8A-205ENST00000485596 DEKP35659 375 aaKnown RBP23.29■■□□□ 1.32
PDE8A-205ENST00000485596 ERICH6BQ5W0A0 696 aa23.28■■□□□ 1.32
PDE8A-205ENST00000485596 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
PDE8A-205ENST00000485596 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
PDE8A-205ENST00000485596 NPM2Q86SE8 214 aaKnown RBP23.25■■□□□ 1.31
PDE8A-205ENST00000485596 NOP58Q9Y2X3 529 aaKnown RBP23.25■■□□□ 1.31
PDE8A-205ENST00000485596 SAMD9Q5K651 1589 aa23.25■■□□□ 1.31
PDE8A-205ENST00000485596 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
PDE8A-205ENST00000485596 PKD2Q13563 968 aa23.22■■□□□ 1.31
PDE8A-205ENST00000485596 NUDCQ9Y266 331 aa23.21■■□□□ 1.31
PDE8A-205ENST00000485596 THOC2Q8NI27 1593 aaKnown RBP23.2■■□□□ 1.3
PDE8A-205ENST00000485596 CFDP1Q9UEE9 299 aaPredicted RBP23.19■■□□□ 1.3
PDE8A-205ENST00000485596 PDS5BQ9NTI5 1447 aa23.18■■□□□ 1.3
PDE8A-205ENST00000485596 RPRD2Q5VT52 1461 aaKnown RBP23.16■■□□□ 1.3
PDE8A-205ENST00000485596 USP47Q96K76 1375 aa23.16■■□□□ 1.3
PDE8A-205ENST00000485596 DAPK1P53355 1430 aa23.16■■□□□ 1.3
PDE8A-205ENST00000485596 HECW1Q76N89 1606 aa23.16■■□□□ 1.3
PDE8A-205ENST00000485596 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
PDE8A-205ENST00000485596 ABCC5O15440 1437 aa23.15■■□□□ 1.3
PDE8A-205ENST00000485596 FBLN2P98095 1184 aa23.15■■□□□ 1.3
PDE8A-205ENST00000485596 CARD11Q9BXL7 1154 aa23.15■■□□□ 1.3
PDE8A-205ENST00000485596 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
PDE8A-205ENST00000485596 ANP32AP39687 249 aaKnown RBP23.14■■□□□ 1.3
PDE8A-205ENST00000485596 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.3
PDE8A-205ENST00000485596 SPATA31E1Q6ZUB1 1445 aa23.11■■□□□ 1.29
PDE8A-205ENST00000485596 TEX14Q8IWB6 1497 aa23.11■■□□□ 1.29
PDE8A-205ENST00000485596 GCC2Q8IWJ2 1684 aa23.11■■□□□ 1.29
PDE8A-205ENST00000485596 ABCA5Q8WWZ7 1642 aa23.11■■□□□ 1.29
PDE8A-205ENST00000485596 MIA2Q96PC5 1412 aa23.11■■□□□ 1.29
PDE8A-205ENST00000485596 ST20-MTHFSA0A0A6YYL1 179 aa23.1■■□□□ 1.29
PDE8A-205ENST00000485596 DHX29Q7Z478 1369 aaKnown RBP23.09■■□□□ 1.29
PDE8A-205ENST00000485596 PNISRQ8TF01 805 aaKnown RBP23.09■■□□□ 1.29
PDE8A-205ENST00000485596 ZBTB47Q9UFB7 747 aaPredicted RBP23.09■■□□□ 1.29
PDE8A-205ENST00000485596 EXOC6Q8TAG9 804 aa23.07■■□□□ 1.28
PDE8A-205ENST00000485596 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
PDE8A-205ENST00000485596 SMG6Q86US8 1419 aaKnown RBP23.07■■□□□ 1.28
PDE8A-205ENST00000485596 PRG4Q92954 1404 aaPredicted RBP23.05■■□□□ 1.28
PDE8A-205ENST00000485596 SKAP1Q86WV1 359 aa23.05■■□□□ 1.28
PDE8A-205ENST00000485596 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
PDE8A-205ENST00000485596 IPO9Q96P70 1041 aaKnown RBP23.04■■□□□ 1.28
PDE8A-205ENST00000485596 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
PDE8A-205ENST00000485596 IQGAP2Q13576 1575 aa23.03■■□□□ 1.28
PDE8A-205ENST00000485596 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
PDE8A-205ENST00000485596 PLIN1O60240 522 aa23.01■■□□□ 1.27
PDE8A-205ENST00000485596 NUP155O75694 1391 aa22.99■■□□□ 1.27
PDE8A-205ENST00000485596 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
PDE8A-205ENST00000485596 CDCA7LQ96GN5 454 aa22.98■■□□□ 1.27
PDE8A-205ENST00000485596 PZPP20742 1482 aa22.97■■□□□ 1.27
PDE8A-205ENST00000485596 WDR62O43379 1518 aa22.97■■□□□ 1.27
PDE8A-205ENST00000485596 CC2D1BQ5T0F9 858 aaKnown RBP22.97■■□□□ 1.27
PDE8A-205ENST00000485596 BCORL1Q5H9F3 1711 aa22.96■■□□□ 1.27
PDE8A-205ENST00000485596 RCAN3Q9UKA8 241 aa22.94■■□□□ 1.26
PDE8A-205ENST00000485596 RRP1P56182 461 aaKnown RBP22.93■■□□□ 1.26
PDE8A-205ENST00000485596 KIAA1107Q9UPP5 1409 aa22.92■■□□□ 1.26
PDE8A-205ENST00000485596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.262e-6■■□□□ 13.7
PDE8A-205ENST00000485596 NUP153P49790 1475 aaKnown RBP22.92■■□□□ 1.26
PDE8A-205ENST00000485596 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
PDE8A-205ENST00000485596 HNRNPMP52272 730 aaKnown RBP eCLIP22.91■■□□□ 1.261e-6■■■■□ 23.2
PDE8A-205ENST00000485596 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
PDE8A-205ENST00000485596 RTN4Q9NQC3 1192 aaKnown RBP22.91■■□□□ 1.26
PDE8A-205ENST00000485596 RNF123Q5XPI4 1314 aa22.9■■□□□ 1.26
PDE8A-205ENST00000485596 MYT1LQ9UL68 1186 aa22.9■■□□□ 1.26
PDE8A-205ENST00000485596 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
PDE8A-205ENST00000485596 CAMSAP2Q08AD1 1489 aa22.88■■□□□ 1.25
PDE8A-205ENST00000485596 DNMT1P26358 1616 aaKnown RBP22.88■■□□□ 1.25
PDE8A-205ENST00000485596 MYBBP1AQ9BQG0 1328 aaKnown RBP22.88■■□□□ 1.25
PDE8A-205ENST00000485596 TSPY4P0CV99 314 aa22.87■■□□□ 1.25
PDE8A-205ENST00000485596 TSPY10P0CW01 314 aa22.87■■□□□ 1.25
PDE8A-205ENST00000485596 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
PDE8A-205ENST00000485596 TARBP1Q13395 1621 aaKnown RBP22.87■■□□□ 1.25
PDE8A-205ENST00000485596 KIF15Q9NS87 1388 aa22.87■■□□□ 1.25
PDE8A-205ENST00000485596 PLB1Q6P1J6 1458 aa22.87■■□□□ 1.25
PDE8A-205ENST00000485596 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
PDE8A-205ENST00000485596 ANKRD30AQ9BXX3 1397 aa22.86■■□□□ 1.25
PDE8A-205ENST00000485596 PDE4AP27815 886 aa22.86■■□□□ 1.25
PDE8A-205ENST00000485596 ROCK2O75116 1388 aaKnown RBP22.85■■□□□ 1.25
PDE8A-205ENST00000485596 PLEKHD1A6NEE1 506 aa22.83■■□□□ 1.24
PDE8A-205ENST00000485596 NEFMP07197 916 aa22.82■■□□□ 1.24
PDE8A-205ENST00000485596 DISP1Q96F81 1524 aa22.81■■□□□ 1.24
PDE8A-205ENST00000485596 SLC4A3P48751 1232 aa22.8■■□□□ 1.24
PDE8A-205ENST00000485596 RALBP1Q15311 655 aa22.8■■□□□ 1.24
PDE8A-205ENST00000485596 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
PDE8A-205ENST00000485596 PBRM1Q86U86 1689 aa22.8■■□□□ 1.24
PDE8A-205ENST00000485596 TROQ12816 1431 aaPredicted RBP22.79■■□□□ 1.24
PDE8A-205ENST00000485596 ADAMTS12P58397 1594 aa22.79■■□□□ 1.24
PDE8A-205ENST00000485596 IL27Q8NEV9 243 aa22.78■■□□□ 1.24
PDE8A-205ENST00000485596 NLRP13Q86W25 1043 aa22.77■■□□□ 1.24
PDE8A-205ENST00000485596 CRBNQ96SW2 442 aa22.77■■□□□ 1.24
PDE8A-205ENST00000485596 MBD5Q9P267 1494 aa22.76■■□□□ 1.23
PDE8A-205ENST00000485596 BRD4O60885 1362 aaPredicted RBP22.76■■□□□ 1.23
PDE8A-205ENST00000485596 KDM5CP41229 1560 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms