RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
SREBF1-213ENST00000485080 ARHGAP5Q13017 1502 aa28.05■■■□□ 2.08
SREBF1-213ENST00000485080 LRRC9Q6ZRR7 1453 aa28.05■■■□□ 2.08
SREBF1-213ENST00000485080 CDC42BPAQ5VT25 1732 aa28.04■■■□□ 2.08
SREBF1-213ENST00000485080 ADGRL1O94910 1474 aa28.03■■■□□ 2.08
SREBF1-213ENST00000485080 RAPGEF3O95398 923 aa28.03■■■□□ 2.08
SREBF1-213ENST00000485080 FRMPD1Q5SYB0 1578 aa28.01■■■□□ 2.07
SREBF1-213ENST00000485080 SCAPERQ9BY12 1400 aa28.01■■■□□ 2.07
SREBF1-213ENST00000485080 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
SREBF1-213ENST00000485080 RICTORQ6R327 1708 aa27.99■■■□□ 2.07
SREBF1-213ENST00000485080 SUPT6HQ7KZ85 1726 aaKnown RBP27.98■■■□□ 2.07
SREBF1-213ENST00000485080 NCOA2Q15596 1464 aa27.97■■■□□ 2.07
SREBF1-213ENST00000485080 POGZQ7Z3K3 1410 aa27.97■■■□□ 2.07
SREBF1-213ENST00000485080 APLP2Q06481 763 aa27.96■■■□□ 2.07
SREBF1-213ENST00000485080 KANK4Q5T7N3 995 aaPredicted RBP27.95■■■□□ 2.06
SREBF1-213ENST00000485080 ZMYM4Q5VZL5 1548 aa27.95■■■□□ 2.06
SREBF1-213ENST00000485080 CFDP1Q9UEE9 299 aaPredicted RBP27.93■■■□□ 2.06
SREBF1-213ENST00000485080 ABCC1P33527 1531 aa27.92■■■□□ 2.06
SREBF1-213ENST00000485080 MAGI2Q86UL8 1455 aa27.92■■■□□ 2.06
SREBF1-213ENST00000485080 ZNF518AQ6AHZ1 1483 aa27.9■■■□□ 2.06
SREBF1-213ENST00000485080 KIAA1107Q9UPP5 1409 aa27.9■■■□□ 2.06
SREBF1-213ENST00000485080 ITSN2Q9NZM3 1697 aa27.9■■■□□ 2.06
SREBF1-213ENST00000485080 PLEKHH2Q8IVE3 1493 aa27.89■■■□□ 2.05
SREBF1-213ENST00000485080 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
SREBF1-213ENST00000485080 SAMD9LQ8IVG5 1584 aa27.87■■■□□ 2.05
SREBF1-213ENST00000485080 KDM5CP41229 1560 aa27.86■■■□□ 2.05
SREBF1-213ENST00000485080 ARHGEF40Q8TER5 1519 aa27.83■■■□□ 2.05
SREBF1-213ENST00000485080 AFAP1Q8N556 730 aa27.83■■■□□ 2.05
SREBF1-213ENST00000485080 ZNF777Q9ULD5 760 aaPredicted RBP27.82■■■□□ 2.04
SREBF1-213ENST00000485080 TRAPPC8Q9Y2L5 1435 aa27.82■■■□□ 2.04
SREBF1-213ENST00000485080 MLH3Q9UHC1 1453 aa27.8■■■□□ 2.04
SREBF1-213ENST00000485080 ZFYVE16Q7Z3T8 1539 aa27.79■■■□□ 2.04
SREBF1-213ENST00000485080 SYCP2Q9BX26 1530 aa27.78■■■□□ 2.04
SREBF1-213ENST00000485080 MYOM3Q5VTT5 1437 aa27.76■■■□□ 2.04
SREBF1-213ENST00000485080 MIA2Q96PC5 1412 aa27.76■■■□□ 2.04
SREBF1-213ENST00000485080 YEATS2Q9ULM3 1422 aa27.76■■■□□ 2.04
SREBF1-213ENST00000485080 MBD5Q9P267 1494 aa27.76■■■□□ 2.03
SREBF1-213ENST00000485080 ZNF644Q9H582 1327 aaPredicted RBP27.75■■■□□ 2.03
SREBF1-213ENST00000485080 HNRNPMP52272 730 aaKnown RBP eCLIP27.75■■■□□ 2.031e-7■□□□□ 8.7
SREBF1-213ENST00000485080 HECW2Q9P2P5 1572 aa27.73■■■□□ 2.03
SREBF1-213ENST00000485080 KDM4FA0A1W2PPD8 638 aa27.73■■■□□ 2.03
SREBF1-213ENST00000485080 ATP10AO60312 1499 aa27.71■■■□□ 2.03
SREBF1-213ENST00000485080 RSPH4AQ5TD94 716 aa27.71■■■□□ 2.03
SREBF1-213ENST00000485080 CAMSAP2Q08AD1 1489 aa27.7■■■□□ 2.03
SREBF1-213ENST00000485080 C9orf84Q5VXU9 1444 aa27.67■■■□□ 2.02
SREBF1-213ENST00000485080 SPAG9O60271 1321 aaKnown RBP27.67■■■□□ 2.02
SREBF1-213ENST00000485080 KIDINS220Q9ULH0 1771 aa27.65■■■□□ 2.02
SREBF1-213ENST00000485080 REREQ9P2R6 1566 aa27.65■■■□□ 2.02
SREBF1-213ENST00000485080 ARHGEF5Q12774 1597 aa27.65■■■□□ 2.02
SREBF1-213ENST00000485080 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
SREBF1-213ENST00000485080 CCDC141Q6ZP82 1450 aa27.63■■■□□ 2.01
SREBF1-213ENST00000485080 RTEL1-TNFRSF6BF6WH68 1400 aa27.62■■■□□ 2.01
SREBF1-213ENST00000485080 INO80Q9ULG1 1556 aaPredicted RBP27.61■■■□□ 2.01
SREBF1-213ENST00000485080 ABCA6Q8N139 1617 aa27.61■■■□□ 2.01
SREBF1-213ENST00000485080 FGD6Q6ZV73 1430 aa27.6■■■□□ 2.01
SREBF1-213ENST00000485080 ATP7AQ04656 1500 aa27.6■■■□□ 2.01
SREBF1-213ENST00000485080 MYT1LQ9UL68 1186 aa27.59■■■□□ 2.01
SREBF1-213ENST00000485080 ARID4BQ4LE39 1312 aaPredicted RBP27.58■■■□□ 2.01
SREBF1-213ENST00000485080 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
SREBF1-213ENST00000485080 BCORL1Q5H9F3 1711 aa27.57■■■□□ 2
SREBF1-213ENST00000485080 SIGLEC1Q9BZZ2 1709 aa27.57■■■□□ 2
SREBF1-213ENST00000485080 ADAMTSL3P82987 1691 aa27.56■■■□□ 2
SREBF1-213ENST00000485080 AGLP35573 1532 aa27.56■■■□□ 2
SREBF1-213ENST00000485080 PTPN23Q9H3S7 1636 aa27.56■■■□□ 2
SREBF1-213ENST00000485080 TSPY4P0CV99 314 aa27.52■■■□□ 2
SREBF1-213ENST00000485080 TSPY10P0CW01 314 aa27.52■■■□□ 2
SREBF1-213ENST00000485080 MAST1Q9Y2H9 1570 aa27.49■■□□□ 1.99
SREBF1-213ENST00000485080 A2MP01023 1474 aa27.48■■□□□ 1.99
SREBF1-213ENST00000485080 PLXNC1O60486 1568 aa27.48■■□□□ 1.99
SREBF1-213ENST00000485080 ADGBQ8N7X0 1667 aa27.46■■□□□ 1.99
SREBF1-213ENST00000485080 ABCC5O15440 1437 aa27.45■■□□□ 1.98
SREBF1-213ENST00000485080 SHANK2Q9UPX8 1470 aa27.44■■□□□ 1.98
SREBF1-213ENST00000485080 DHX29Q7Z478 1369 aaKnown RBP27.43■■□□□ 1.98
SREBF1-213ENST00000485080 MADDQ8WXG6 1647 aa27.42■■□□□ 1.98
SREBF1-213ENST00000485080 DNMT1P26358 1616 aaKnown RBP27.41■■□□□ 1.98
SREBF1-213ENST00000485080 DAPK1P53355 1430 aa27.41■■□□□ 1.98
SREBF1-213ENST00000485080 PTPRMP28827 1452 aa27.39■■□□□ 1.98
SREBF1-213ENST00000485080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.38■■□□□ 1.971e-6■■□□□ 13
SREBF1-213ENST00000485080 MLECQ14165 292 aa27.38■■□□□ 1.97
SREBF1-213ENST00000485080 CROCC2H7BZ55 1655 aa27.37■■□□□ 1.97
SREBF1-213ENST00000485080 PPARGC1BQ86YN6 1023 aaKnown RBP27.37■■□□□ 1.97
SREBF1-213ENST00000485080 FER1L4A9Z1Z3 1794 aa27.33■■□□□ 1.97
SREBF1-213ENST00000485080 FAM50AQ14320 339 aaKnown RBP27.33■■□□□ 1.97
SREBF1-213ENST00000485080 PPP6R1Q9UPN7 881 aa27.33■■□□□ 1.97
SREBF1-213ENST00000485080 RIMS1Q86UR5 1692 aaKnown RBP27.31■■□□□ 1.96
SREBF1-213ENST00000485080 CNTLNQ9NXG0 1405 aa27.29■■□□□ 1.96
SREBF1-213ENST00000485080 RRBP1Q9P2E9 1410 aaKnown RBP27.29■■□□□ 1.96
SREBF1-213ENST00000485080 DUOX2Q9NRD8 1548 aa27.28■■□□□ 1.96
SREBF1-213ENST00000485080 ADGRL2O95490 1459 aa27.28■■□□□ 1.96
SREBF1-213ENST00000485080 ANKRD30AQ9BXX3 1397 aa27.27■■□□□ 1.96
SREBF1-213ENST00000485080 NCOA1Q15788 1441 aa27.26■■□□□ 1.95
SREBF1-213ENST00000485080 KIF15Q9NS87 1388 aa27.26■■□□□ 1.95
SREBF1-213ENST00000485080 KIF3BO15066 747 aa27.24■■□□□ 1.95
SREBF1-213ENST00000485080 EIF2AK4Q9P2K8 1649 aaKnown RBP27.23■■□□□ 1.95
SREBF1-213ENST00000485080 FAM135AQ9P2D6 1515 aa27.23■■□□□ 1.95
SREBF1-213ENST00000485080 GGT6Q6P531 493 aa27.22■■□□□ 1.95
SREBF1-213ENST00000485080 ESF1Q9H501 851 aaKnown RBP27.22■■□□□ 1.95
SREBF1-213ENST00000485080 ERBINQ96RT1 1412 aa27.22■■□□□ 1.95
SREBF1-213ENST00000485080 PTPRKQ15262 1439 aa27.21■■□□□ 1.95
SREBF1-213ENST00000485080 RRP7BPQ9NSQ0 103 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms