RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
HDAC1-209ENST00000484305 PREX2Q70Z35 1606 aa20.66■□□□□ 0.9
HDAC1-209ENST00000484305 CDC42BPAQ5VT25 1732 aa20.65■□□□□ 0.9
HDAC1-209ENST00000484305 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.9
HDAC1-209ENST00000484305 POGZQ7Z3K3 1410 aa20.64■□□□□ 0.89
HDAC1-209ENST00000484305 ARHGEF40Q8TER5 1519 aa20.63■□□□□ 0.89
HDAC1-209ENST00000484305 MTUS2Q5JR59 1369 aa20.6■□□□□ 0.89
HDAC1-209ENST00000484305 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
HDAC1-209ENST00000484305 ZFYVE16Q7Z3T8 1539 aa20.59■□□□□ 0.89
HDAC1-209ENST00000484305 MAGI2Q86UL8 1455 aa20.58■□□□□ 0.89
HDAC1-209ENST00000484305 GPATCH8Q9UKJ3 1502 aaKnown RBP20.57■□□□□ 0.88
HDAC1-209ENST00000484305 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
HDAC1-209ENST00000484305 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
HDAC1-209ENST00000484305 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
HDAC1-209ENST00000484305 AFAP1Q8N556 730 aa20.56■□□□□ 0.88
HDAC1-209ENST00000484305 ABCC1P33527 1531 aa20.55■□□□□ 0.88
HDAC1-209ENST00000484305 ARHGEF12Q9NZN5 1544 aa20.55■□□□□ 0.88
HDAC1-209ENST00000484305 BCORL1Q5H9F3 1711 aa20.55■□□□□ 0.88
HDAC1-209ENST00000484305 SIGLEC1Q9BZZ2 1709 aa20.55■□□□□ 0.88
HDAC1-209ENST00000484305 ADAMTSL3P82987 1691 aa20.54■□□□□ 0.88
HDAC1-209ENST00000484305 EHBP1L1Q8N3D4 1523 aa20.54■□□□□ 0.88
HDAC1-209ENST00000484305 KDM5CP41229 1560 aa20.54■□□□□ 0.88
HDAC1-209ENST00000484305 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
HDAC1-209ENST00000484305 CCNB3Q8WWL7 1395 aa20.53■□□□□ 0.88
HDAC1-209ENST00000484305 SAMD9LQ8IVG5 1584 aa20.52■□□□□ 0.88
HDAC1-209ENST00000484305 ZNF777Q9ULD5 760 aaPredicted RBP20.52■□□□□ 0.88
HDAC1-209ENST00000484305 TRAPPC8Q9Y2L5 1435 aa20.52■□□□□ 0.87
HDAC1-209ENST00000484305 TIAM1Q13009 1591 aa20.51■□□□□ 0.87
HDAC1-209ENST00000484305 ATP10AO60312 1499 aa20.5■□□□□ 0.87
HDAC1-209ENST00000484305 CFDP1Q9UEE9 299 aaPredicted RBP20.49■□□□□ 0.87
HDAC1-209ENST00000484305 HECW2Q9P2P5 1572 aa20.49■□□□□ 0.87
HDAC1-209ENST00000484305 MADDQ8WXG6 1647 aa20.48■□□□□ 0.87
HDAC1-209ENST00000484305 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
HDAC1-209ENST00000484305 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
HDAC1-209ENST00000484305 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
HDAC1-209ENST00000484305 C9orf84Q5VXU9 1444 aa20.45■□□□□ 0.86
HDAC1-209ENST00000484305 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
HDAC1-209ENST00000484305 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
HDAC1-209ENST00000484305 DIP2CQ9Y2E4 1556 aa20.45■□□□□ 0.86
HDAC1-209ENST00000484305 PTPRMP28827 1452 aa20.44■□□□□ 0.86
HDAC1-209ENST00000484305 ABCA6Q8N139 1617 aa20.44■□□□□ 0.86
HDAC1-209ENST00000484305 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
HDAC1-209ENST00000484305 KIDINS220Q9ULH0 1771 aa20.43■□□□□ 0.86
HDAC1-209ENST00000484305 LRRC9Q6ZRR7 1453 aa20.43■□□□□ 0.86
HDAC1-209ENST00000484305 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
HDAC1-209ENST00000484305 MLECQ14165 292 aa20.42■□□□□ 0.86
HDAC1-209ENST00000484305 ZNF644Q9H582 1327 aaPredicted RBP20.42■□□□□ 0.86
HDAC1-209ENST00000484305 KIAA1107Q9UPP5 1409 aa20.42■□□□□ 0.86
HDAC1-209ENST00000484305 PLEKHH2Q8IVE3 1493 aa20.41■□□□□ 0.86
HDAC1-209ENST00000484305 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
HDAC1-209ENST00000484305 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
HDAC1-209ENST00000484305 REREQ9P2R6 1566 aa20.38■□□□□ 0.85
HDAC1-209ENST00000484305 FER1L4A9Z1Z3 1794 aa20.37■□□□□ 0.85
HDAC1-209ENST00000484305 SPAG9O60271 1321 aaKnown RBP20.36■□□□□ 0.85
HDAC1-209ENST00000484305 MBD5Q9P267 1494 aa20.34■□□□□ 0.85
HDAC1-209ENST00000484305 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
HDAC1-209ENST00000484305 ATP7AQ04656 1500 aa20.33■□□□□ 0.85
HDAC1-209ENST00000484305 CAMSAP2Q08AD1 1489 aa20.31■□□□□ 0.84
HDAC1-209ENST00000484305 AGLP35573 1532 aa20.31■□□□□ 0.84
HDAC1-209ENST00000484305 APLP2Q06481 763 aa20.3■□□□□ 0.84
HDAC1-209ENST00000484305 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
HDAC1-209ENST00000484305 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
HDAC1-209ENST00000484305 CCDC141Q6ZP82 1450 aa20.24■□□□□ 0.83
HDAC1-209ENST00000484305 ADGBQ8N7X0 1667 aa20.24■□□□□ 0.83
HDAC1-209ENST00000484305 RTEL1-TNFRSF6BF6WH68 1400 aa20.24■□□□□ 0.83
HDAC1-209ENST00000484305 PLXNC1O60486 1568 aa20.24■□□□□ 0.83
HDAC1-209ENST00000484305 A2MP01023 1474 aa20.24■□□□□ 0.83
HDAC1-209ENST00000484305 CEBPAP49715 358 aaPredicted RBP20.23■□□□□ 0.83
HDAC1-209ENST00000484305 ARHGEF5Q12774 1597 aa20.23■□□□□ 0.83
HDAC1-209ENST00000484305 RSPH4AQ5TD94 716 aa20.22■□□□□ 0.83
HDAC1-209ENST00000484305 MIA2Q96PC5 1412 aa20.21■□□□□ 0.83
HDAC1-209ENST00000484305 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
HDAC1-209ENST00000484305 C3P01024 1663 aa20.18■□□□□ 0.82
HDAC1-209ENST00000484305 ESF1Q9H501 851 aaKnown RBP20.17■□□□□ 0.82
HDAC1-209ENST00000484305 DHX29Q7Z478 1369 aaKnown RBP20.16■□□□□ 0.82
HDAC1-209ENST00000484305 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
HDAC1-209ENST00000484305 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
HDAC1-209ENST00000484305 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
HDAC1-209ENST00000484305 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
HDAC1-209ENST00000484305 GGT6Q6P531 493 aa20.13■□□□□ 0.81
HDAC1-209ENST00000484305 SETD1BQ9UPS6 1966 aaKnown RBP20.13■□□□□ 0.81
HDAC1-209ENST00000484305 PREX1Q8TCU6 1659 aa20.13■□□□□ 0.81
HDAC1-209ENST00000484305 HSPA2P54652 639 aa20.12■□□□□ 0.81
HDAC1-209ENST00000484305 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
HDAC1-209ENST00000484305 CLTCQ00610 1675 aaKnown RBP20.12■□□□□ 0.81
HDAC1-209ENST00000484305 MAST1Q9Y2H9 1570 aa20.12■□□□□ 0.81
HDAC1-209ENST00000484305 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
HDAC1-209ENST00000484305 ZMYM3Q14202 1370 aa20.08■□□□□ 0.81
HDAC1-209ENST00000484305 KIF3BO15066 747 aa20.08■□□□□ 0.81
HDAC1-209ENST00000484305 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
HDAC1-209ENST00000484305 TCOF1Q13428 1488 aaKnown RBP20.07■□□□□ 0.8
HDAC1-209ENST00000484305 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
HDAC1-209ENST00000484305 ABCC5O15440 1437 aa20.05■□□□□ 0.8
HDAC1-209ENST00000484305 UHRF1BP1Q6BDS2 1440 aa20.04■□□□□ 0.8
HDAC1-209ENST00000484305 DNMT1P26358 1616 aaKnown RBP20.04■□□□□ 0.8
HDAC1-209ENST00000484305 DAPK1P53355 1430 aa20.03■□□□□ 0.8
HDAC1-209ENST00000484305 SHANK2Q9UPX8 1470 aa20.02■□□□□ 0.8
HDAC1-209ENST00000484305 NPATQ14207 1427 aa20.01■□□□□ 0.79
HDAC1-209ENST00000484305 PTPRKQ15262 1439 aa19.99■□□□□ 0.79
HDAC1-209ENST00000484305 RNF17Q9BXT8 1623 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms